RNA–Protein interactions for RNA: ENST00000551339.5

PFKM-222, Transcript of phosphofructokinase, muscle, human

TSL 4

Gene PFKM, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-222	ENST00000551339	RBM46	Q8TBY0	533 aa	Known RBP	12.54	□□□□□ -0.4
PFKM-222	ENST00000551339	UTP14A	Q9BVJ6	771 aa	Known RBP	12.54	□□□□□ -0.4
PFKM-222	ENST00000551339	IFT57	Q9NWB7	429 aa		12.54	□□□□□ -0.4
PFKM-222	ENST00000551339	FER1L6	Q2WGJ9	1857 aa		12.53	□□□□□ -0.4
PFKM-222	ENST00000551339	POTEC	B2RU33	542 aa		12.53	□□□□□ -0.4
PFKM-222	ENST00000551339	GNAI1	P63096	354 aa		12.53	□□□□□ -0.4
PFKM-222	ENST00000551339	TCIRG1	Q13488	830 aa		12.53	□□□□□ -0.4
PFKM-222	ENST00000551339	HSP90AB3P	Q58FF7	597 aa		12.53	□□□□□ -0.4
PFKM-222	ENST00000551339	DPY19L2	Q6NUT2	758 aa		12.53	□□□□□ -0.4
PFKM-222	ENST00000551339	C3orf67	Q6ZVT6	689 aa		12.53	□□□□□ -0.4
PFKM-222	ENST00000551339	NLRP10	Q86W26	655 aa		12.53	□□□□□ -0.4
PFKM-222	ENST00000551339	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.53	□□□□□ -0.4
PFKM-222	ENST00000551339	RTKN2	Q8IZC4	609 aa		12.53	□□□□□ -0.4
PFKM-222	ENST00000551339	DBF4	Q9UBU7	674 aa	Predicted RBP	12.53	□□□□□ -0.4
PFKM-222	ENST00000551339	RIC1	Q4ADV7	1423 aa		12.53	□□□□□ -0.4
PFKM-222	ENST00000551339	CCER2	I3L3R5	266 aa		12.52	□□□□□ -0.41
PFKM-222	ENST00000551339	VEGFA	P15692	232 aa	Predicted RBP	12.52	□□□□□ -0.41
PFKM-222	ENST00000551339	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.52	□□□□□ -0.41
PFKM-222	ENST00000551339	ANKRD13D	Q6ZTN6	518 aa		12.52	□□□□□ -0.41
PFKM-222	ENST00000551339	RPGR	Q92834	1020 aa	Known RBP	12.52	□□□□□ -0.41
PFKM-222	ENST00000551339	NLRP3	Q96P20	1036 aa		12.52	□□□□□ -0.41
PFKM-222	ENST00000551339	CRAMP1	Q96RY5	1269 aa		12.52	□□□□□ -0.41
PFKM-222	ENST00000551339	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.51	□□□□□ -0.41
PFKM-222	ENST00000551339	ARFGEF2	Q9Y6D5	1785 aa		12.51	□□□□□ -0.41
PFKM-222	ENST00000551339	CCDC88A	Q3V6T2	1871 aa		12.51	□□□□□ -0.41
PFKM-222	ENST00000551339	ELL2	O00472	640 aa	Predicted RBP	12.51	□□□□□ -0.41
PFKM-222	ENST00000551339	WWC1	Q8IX03	1113 aa		12.51	□□□□□ -0.41
PFKM-222	ENST00000551339	FAM9B	Q8IZU0	186 aa		12.51	□□□□□ -0.41
PFKM-222	ENST00000551339	C8orf58	Q8NAV2	365 aa		12.51	□□□□□ -0.41
PFKM-222	ENST00000551339	PLBD2	Q8NHP8	589 aa		12.51	□□□□□ -0.41
PFKM-222	ENST00000551339	RBM17	Q96I25	401 aa	Known RBP	12.51	□□□□□ -0.41
PFKM-222	ENST00000551339	HYPK	Q9NX55	129 aa		12.51	□□□□□ -0.41
PFKM-222	ENST00000551339	FSTL1	Q12841	308 aa		12.5	□□□□□ -0.41
PFKM-222	ENST00000551339	CC2D2B	Q6DHV5	1058 aa		12.5	□□□□□ -0.41
PFKM-222	ENST00000551339	SYNE4	Q8N205	404 aa		12.5	□□□□□ -0.41
PFKM-222	ENST00000551339	ISCA1	Q9BUE6	129 aa		12.5	□□□□□ -0.41
PFKM-222	ENST00000551339	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.5	□□□□□ -0.41
PFKM-222	ENST00000551339	RNF123	Q5XPI4	1314 aa		12.5	□□□□□ -0.41
PFKM-222	ENST00000551339	CACNA1S	Q13698	1873 aa		12.49	□□□□□ -0.41
PFKM-222	ENST00000551339	SNED1	Q8TER0	1413 aa		12.49	□□□□□ -0.41
PFKM-222	ENST00000551339	IL16	Q14005	1332 aa		12.49	□□□□□ -0.41
PFKM-222	ENST00000551339	DDN	O94850	711 aa	Predicted RBP	12.49	□□□□□ -0.41
PFKM-222	ENST00000551339	HCLS1	P14317	486 aa	Predicted RBP	12.49	□□□□□ -0.41
PFKM-222	ENST00000551339	APLP1	P51693	650 aa		12.49	□□□□□ -0.41
PFKM-222	ENST00000551339	PSMD1	Q99460	953 aa		12.49	□□□□□ -0.41
PFKM-222	ENST00000551339	TRMT112	Q9UI30	125 aa	Known RBP	12.49	□□□□□ -0.41
PFKM-222	ENST00000551339	SH3TC1	Q8TE82	1336 aa		12.48	□□□□□ -0.41
PFKM-222	ENST00000551339	IARS	P41252	1262 aa	Known RBP	12.48	□□□□□ -0.41
PFKM-222	ENST00000551339	DIEXF	Q68CQ4	756 aa	Known RBP	12.48	□□□□□ -0.41
PFKM-222	ENST00000551339	SLC51A	Q86UW1	340 aa		12.48	□□□□□ -0.41
PFKM-222	ENST00000551339	WDR63	Q8IWG1	891 aa		12.48	□□□□□ -0.41
PFKM-222	ENST00000551339	SMC1B	Q8NDV3	1235 aa		12.48	□□□□□ -0.41
PFKM-222	ENST00000551339	ZNF428	Q96B54	188 aa		12.48	□□□□□ -0.41
PFKM-222	ENST00000551339	PHAX	Q9H814	394 aa	Known RBP	12.48	□□□□□ -0.41
PFKM-222	ENST00000551339	DICER1	Q9UPY3	1922 aa	Known RBP	12.48	□□□□□ -0.41
PFKM-222	ENST00000551339	TIAM2	Q8IVF5	1701 aa		12.48	□□□□□ -0.41
PFKM-222	ENST00000551339	ATP5J2-PTCD1	G3V325	749 aa		12.47	□□□□□ -0.41
PFKM-222	ENST00000551339	TCERG1	O14776	1098 aa	Known RBP	12.47	□□□□□ -0.41
PFKM-222	ENST00000551339	PPEF1	O14829	653 aa	Predicted RBP	12.47	□□□□□ -0.41
PFKM-222	ENST00000551339	TRIM28	Q13263	835 aa	Known RBP	12.47	□□□□□ -0.41
PFKM-222	ENST00000551339	GRIPAP1	Q4V328	841 aa		12.47	□□□□□ -0.41
PFKM-222	ENST00000551339	DNAJC5G	Q8N7S2	189 aa		12.47	□□□□□ -0.41
PFKM-222	ENST00000551339	TSPYL6	Q8N831	410 aa		12.47	□□□□□ -0.41
PFKM-222	ENST00000551339	CHMP4A	Q9BY43	222 aa		12.47	□□□□□ -0.41
PFKM-222	ENST00000551339	WDR90	Q96KV7	1748 aa		12.46	□□□□□ -0.41
PFKM-222	ENST00000551339	ABCC4	O15439	1325 aa		12.46	□□□□□ -0.41
PFKM-222	ENST00000551339	FZD9	O00144	591 aa		12.46	□□□□□ -0.41
PFKM-222	ENST00000551339	BBOX1	O75936	387 aa		12.46	□□□□□ -0.41
PFKM-222	ENST00000551339	CCDC30	Q5VVM6	783 aa		12.46	□□□□□ -0.41
PFKM-222	ENST00000551339	RIC3	Q7Z5B4	369 aa		12.46	□□□□□ -0.41
PFKM-222	ENST00000551339	TSR2	Q969E8	191 aa	Known RBP	12.46	□□□□□ -0.41
PFKM-222	ENST00000551339	FAM89A	Q96GI7	184 aa		12.46	□□□□□ -0.41
PFKM-222	ENST00000551339	ATP6V0A2	Q9Y487	856 aa		12.46	□□□□□ -0.41
PFKM-222	ENST00000551339	ZNF541	Q9H0D2	1346 aa		12.45	□□□□□ -0.42
PFKM-222	ENST00000551339	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.45	□□□□□ -0.42
PFKM-222	ENST00000551339	HTRA3	P83110	453 aa		12.44	□□□□□ -0.42
PFKM-222	ENST00000551339	GOLGA2	Q08379	1002 aa		12.44	□□□□□ -0.42
PFKM-222	ENST00000551339	SF3B3	Q15393	1217 aa	Known RBP	12.44	□□□□□ -0.42
PFKM-222	ENST00000551339	DDX46	Q7L014	1031 aa	Known RBP	12.44	□□□□□ -0.42
PFKM-222	ENST00000551339	SP8	Q8IXZ3	490 aa		12.44	□□□□□ -0.42
PFKM-222	ENST00000551339	JDP2	Q8WYK2	163 aa		12.44	□□□□□ -0.42
PFKM-222	ENST00000551339	ANKRD36C	Q5JPF3	1778 aa		12.43	□□□□□ -0.42
PFKM-222	ENST00000551339	GRAP	Q13588	217 aa		12.43	□□□□□ -0.42
PFKM-222	ENST00000551339	RTL5	Q5HYW3	569 aa	Predicted RBP	12.43	□□□□□ -0.42
PFKM-222	ENST00000551339	GRAPL	Q8TC17	118 aa	Predicted RBP	12.43	□□□□□ -0.42
PFKM-222	ENST00000551339	TMX4	Q9H1E5	349 aa	Predicted RBP	12.43	□□□□□ -0.42
PFKM-222	ENST00000551339	IQCA1L	A6NCM1	817 aa		12.42	□□□□□ -0.42
PFKM-222	ENST00000551339	IRS4	O14654	1257 aa	Predicted RBP	12.42	□□□□□ -0.42
PFKM-222	ENST00000551339	POTEI	P0CG38	1075 aa		12.42	□□□□□ -0.42
PFKM-222	ENST00000551339	POTEJ	P0CG39	1038 aa		12.42	□□□□□ -0.42
PFKM-222	ENST00000551339	TWISTNB	Q3B726	338 aa	Predicted RBP	12.42	□□□□□ -0.42
PFKM-222	ENST00000551339	GPC2	Q8N158	579 aa		12.42	□□□□□ -0.42
PFKM-222	ENST00000551339	LARGE2	Q8N3Y3	721 aa		12.42	□□□□□ -0.42
PFKM-222	ENST00000551339	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.42	□□□□□ -0.42
PFKM-222	ENST00000551339	MYD88	Q99836	296 aa		12.42	□□□□□ -0.42
PFKM-222	ENST00000551339	METTL22	Q9BUU2	404 aa	Predicted RBP	12.42	□□□□□ -0.42
PFKM-222	ENST00000551339	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.42	□□□□□ -0.42
PFKM-222	ENST00000551339	VPS33B	Q9H267	617 aa		12.42	□□□□□ -0.42
PFKM-222	ENST00000551339	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.42	□□□□□ -0.42
PFKM-222	ENST00000551339	SALL2	Q9Y467	1007 aa	Predicted RBP	12.42	□□□□□ -0.42

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