RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 RIC3Q7Z5B4 369 aa17.13■□□□□ 0.33
CEP290-205ENST00000550962 NLRP3Q96P20 1036 aa17.13■□□□□ 0.33
CEP290-205ENST00000550962 RNF181Q9P0P0 153 aa17.13■□□□□ 0.33
CEP290-205ENST00000550962 ZC3H4Q9UPT8 1303 aaKnown RBP17.13■□□□□ 0.33
CEP290-205ENST00000550962 C21orf2O43822 256 aa17.12■□□□□ 0.33
CEP290-205ENST00000550962 HSP90B1P14625 803 aaKnown RBP17.12■□□□□ 0.33
CEP290-205ENST00000550962 LMNB1P20700 586 aa17.12■□□□□ 0.33
CEP290-205ENST00000550962 NLRP10Q86W26 655 aa17.12■□□□□ 0.33
CEP290-205ENST00000550962 TMX4Q9H1E5 349 aaPredicted RBP17.12■□□□□ 0.33
CEP290-205ENST00000550962 TRMT112Q9UI30 125 aaKnown RBP17.12■□□□□ 0.33
CEP290-205ENST00000550962 FANCIQ9NVI1 1328 aa17.12■□□□□ 0.33
CEP290-205ENST00000550962 ABCC12Q96J65 1359 aa17.12■□□□□ 0.33
CEP290-205ENST00000550962 ANKRD36CQ5JPF3 1778 aa17.12■□□□□ 0.33
CEP290-205ENST00000550962 CRY2Q49AN0 593 aa17.11■□□□□ 0.33
CEP290-205ENST00000550962 CCDC93Q567U6 631 aa17.11■□□□□ 0.33
CEP290-205ENST00000550962 RBM17Q96I25 401 aaKnown RBP17.11■□□□□ 0.33
CEP290-205ENST00000550962 SH3TC1Q8TE82 1336 aa17.11■□□□□ 0.33
CEP290-205ENST00000550962 TAOK3Q9H2K8 898 aa17.1■□□□□ 0.33
CEP290-205ENST00000550962 ZNF219Q9P2Y4 722 aaPredicted RBP17.1■□□□□ 0.33
CEP290-205ENST00000550962 ARFGEF2Q9Y6D5 1785 aa17.1■□□□□ 0.33
CEP290-205ENST00000550962 GRIPAP1Q4V328 841 aa17.09■□□□□ 0.33
CEP290-205ENST00000550962 CC2D2BQ6DHV5 1058 aa17.09■□□□□ 0.33
CEP290-205ENST00000550962 TSPYL6Q8N831 410 aa17.09■□□□□ 0.33
CEP290-205ENST00000550962 ZNF526Q8TF50 670 aaPredicted RBP17.09■□□□□ 0.33
CEP290-205ENST00000550962 KDM2BQ8NHM5 1336 aa17.09■□□□□ 0.33
CEP290-205ENST00000550962 LTBP3Q9NS15 1303 aa17.09■□□□□ 0.33
CEP290-205ENST00000550962 RASSF7Q02833 373 aa17.08■□□□□ 0.32
CEP290-205ENST00000550962 NEXNQ0ZGT2 675 aa17.08■□□□□ 0.32
CEP290-205ENST00000550962 SLC10A5Q5PT55 438 aa17.08■□□□□ 0.32
CEP290-205ENST00000550962 RTKN2Q8IZC4 609 aa17.08■□□□□ 0.32
CEP290-205ENST00000550962 HOXA10P31260 410 aaPredicted RBP17.07■□□□□ 0.32
CEP290-205ENST00000550962 TRIM28Q13263 835 aaKnown RBP17.07■□□□□ 0.32
CEP290-205ENST00000550962 CRAMP1Q96RY5 1269 aa17.07■□□□□ 0.32
CEP290-205ENST00000550962 ISCA1Q9BUE6 129 aa17.07■□□□□ 0.32
CEP290-205ENST00000550962 PHAXQ9H814 394 aaKnown RBP17.07■□□□□ 0.32
CEP290-205ENST00000550962 NFKBIEO00221 500 aa17.06■□□□□ 0.32
CEP290-205ENST00000550962 CCDC191Q8NCU4 936 aa17.06■□□□□ 0.32
CEP290-205ENST00000550962 TNRC6CQ9HCJ0 1690 aaKnown RBP17.06■□□□□ 0.32
CEP290-205ENST00000550962 ATP5J2-PTCD1G3V325 749 aa17.05■□□□□ 0.32
CEP290-205ENST00000550962 SLC4A2P04920 1241 aa17.05■□□□□ 0.32
CEP290-205ENST00000550962 EXOSC9Q06265 439 aaKnown RBP17.05■□□□□ 0.32
CEP290-205ENST00000550962 DIEXFQ68CQ4 756 aaKnown RBP17.05■□□□□ 0.32
CEP290-205ENST00000550962 KSR2Q6VAB6 950 aa17.05■□□□□ 0.32
CEP290-205ENST00000550962 DDX46Q7L014 1031 aaKnown RBP17.05■□□□□ 0.32
CEP290-205ENST00000550962 MYD88Q99836 296 aa17.05■□□□□ 0.32
CEP290-205ENST00000550962 CACNA1SQ13698 1873 aa17.05■□□□□ 0.32
CEP290-205ENST00000550962 E9PSI1 815 aa17.04■□□□□ 0.32
CEP290-205ENST00000550962 PPEF1O14829 653 aaPredicted RBP17.04■□□□□ 0.32
CEP290-205ENST00000550962 FKBP4Q02790 459 aaKnown RBP eCLIP17.04■□□□□ 0.32
CEP290-205ENST00000550962 DPY19L2Q6NUT2 758 aa17.04■□□□□ 0.32
CEP290-205ENST00000550962 METTL22Q9BUU2 404 aaPredicted RBP17.04■□□□□ 0.32
CEP290-205ENST00000550962 CWC25Q9NXE8 425 aaPredicted RBP17.04■□□□□ 0.32
CEP290-205ENST00000550962 SLX4Q8IY92 1834 aa17.04■□□□□ 0.32
CEP290-205ENST00000550962 HCLS1P14317 486 aaPredicted RBP17.03■□□□□ 0.32
CEP290-205ENST00000550962 TMC4Q7Z404 712 aa17.03■□□□□ 0.32
CEP290-205ENST00000550962 ZBTB38Q8NAP3 1195 aaPredicted RBP17.03■□□□□ 0.32
CEP290-205ENST00000550962 C7orf43Q8WVR3 580 aa17.03■□□□□ 0.32
CEP290-205ENST00000550962 MAP3K2Q9Y2U5 619 aa17.03■□□□□ 0.32
CEP290-205ENST00000550962 FER1L6Q2WGJ9 1857 aa17.02■□□□□ 0.32
CEP290-205ENST00000550962 PI4KAP2A4QPH2 592 aa17.02■□□□□ 0.32
CEP290-205ENST00000550962 VAMP4O75379 141 aa17.02■□□□□ 0.32
CEP290-205ENST00000550962 BBOX1O75936 387 aa17.02■□□□□ 0.32
CEP290-205ENST00000550962 FLIIQ13045 1269 aa17.02■□□□□ 0.32
CEP290-205ENST00000550962 FKBP5Q13451 457 aaPredicted RBP17.02■□□□□ 0.32
CEP290-205ENST00000550962 C16orf71Q8IYS4 520 aaPredicted RBP17.02■□□□□ 0.32
CEP290-205ENST00000550962 PI4KAP1Q8N8J0 262 aa17.02■□□□□ 0.32
CEP290-205ENST00000550962 FAM89AQ96GI7 184 aa17.02■□□□□ 0.32
CEP290-205ENST00000550962 ZNF521Q96K83 1311 aa17.01■□□□□ 0.31
CEP290-205ENST00000550962 IRS4O14654 1257 aaPredicted RBP17.01■□□□□ 0.31
CEP290-205ENST00000550962 TCERG1O14776 1098 aaKnown RBP17.01■□□□□ 0.31
CEP290-205ENST00000550962 C1QTNF8P60827 252 aa17.01■□□□□ 0.31
CEP290-205ENST00000550962 PSMD1Q99460 953 aa17.01■□□□□ 0.31
CEP290-205ENST00000550962 SBF1O95248 1867 aa17.01■□□□□ 0.31
CEP290-205ENST00000550962 PCCAP05165 728 aaPredicted RBP17■□□□□ 0.31
CEP290-205ENST00000550962 ABCC4O15439 1325 aa16.99■□□□□ 0.31
CEP290-205ENST00000550962 TIAM2Q8IVF5 1701 aa16.99■□□□□ 0.31
CEP290-205ENST00000550962 GLTPD2A6NH11 291 aa16.99■□□□□ 0.31
CEP290-205ENST00000550962 GRAPQ13588 217 aa16.99■□□□□ 0.31
CEP290-205ENST00000550962 C3orf67Q6ZVT6 689 aa16.99■□□□□ 0.31
CEP290-205ENST00000550962 SUPT20HQ8NEM7 779 aa16.99■□□□□ 0.31
CEP290-205ENST00000550962 GRAPLQ8TC17 118 aaPredicted RBP16.99■□□□□ 0.31
CEP290-205ENST00000550962 SPINK5Q9NQ38 1064 aaPredicted RBP16.99■□□□□ 0.31
CEP290-205ENST00000550962 ATP6V0A2Q9Y487 856 aa16.99■□□□□ 0.31
CEP290-205ENST00000550962 CACNA1FO60840 1977 aa16.98■□□□□ 0.31
CEP290-205ENST00000550962 IARSP41252 1262 aaKnown RBP16.98■□□□□ 0.31
CEP290-205ENST00000550962 SF3B3Q15393 1217 aaKnown RBP16.98■□□□□ 0.31
CEP290-205ENST00000550962 CCDC152Q4G0S7 254 aa16.98■□□□□ 0.31
CEP290-205ENST00000550962 RTL5Q5HYW3 569 aaPredicted RBP16.98■□□□□ 0.31
CEP290-205ENST00000550962 JDP2Q8WYK2 163 aa16.98■□□□□ 0.31
CEP290-205ENST00000550962 ZNF428Q96B54 188 aa16.98■□□□□ 0.31
CEP290-205ENST00000550962 PDE8AO60658 829 aa16.97■□□□□ 0.31
CEP290-205ENST00000550962 SP8Q8IXZ3 490 aa16.97■□□□□ 0.31
CEP290-205ENST00000550962 SYNE4Q8N205 404 aa16.97■□□□□ 0.31
CEP290-205ENST00000550962 DNAAF4Q8WXU2 420 aa16.97■□□□□ 0.31
CEP290-205ENST00000550962 ZNF277Q9NRM2 450 aaPredicted RBP16.97■□□□□ 0.31
CEP290-205ENST00000550962 CDHR2Q9BYE9 1310 aa16.96■□□□□ 0.31
CEP290-205ENST00000550962 TOMM70O94826 608 aa16.96■□□□□ 0.31
CEP290-205ENST00000550962 PRELPP51888 382 aa16.96■□□□□ 0.31
CEP290-205ENST00000550962 G2E3Q7L622 706 aa16.96■□□□□ 0.31
CEP290-205ENST00000550962 VPS33BQ9H267 617 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms