RNA–Protein interactions for RNA: ENST00000550811.1

TUBA1A-208, Transcript of tubulin alpha 1a, human

TSL 4

Gene TUBA1A, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1A-208	ENST00000550811	FKBP5	Q13451	457 aa	Predicted RBP	12.11	□□□□□ -0.47
TUBA1A-208	ENST00000550811	CHADL	Q6NUI6	762 aa		12.11	□□□□□ -0.47
TUBA1A-208	ENST00000550811	G2E3	Q7L622	706 aa		12.11	□□□□□ -0.47
TUBA1A-208	ENST00000550811	EFCAB3	Q8N7B9	438 aa		12.11	□□□□□ -0.47
TUBA1A-208	ENST00000550811	XAGE3	Q8WTP9	111 aa		12.11	□□□□□ -0.47
TUBA1A-208	ENST00000550811	NOB1	Q9ULX3	412 aa	Known RBP	12.11	□□□□□ -0.47
TUBA1A-208	ENST00000550811	RTCB	Q9Y3I0	505 aa	Known RBP	12.11	□□□□□ -0.47
TUBA1A-208	ENST00000550811	RPS6KA4	O75676	772 aa		12.1	□□□□□ -0.47
TUBA1A-208	ENST00000550811	SSFA2	P28290	1259 aa		12.1	□□□□□ -0.47
TUBA1A-208	ENST00000550811	EIF5	P55010	431 aa	Known RBP	12.1	□□□□□ -0.47
TUBA1A-208	ENST00000550811	AIMP1	Q12904	312 aa	Known RBP	12.1	□□□□□ -0.47
TUBA1A-208	ENST00000550811	MFSD10	Q14728	455 aa		12.1	□□□□□ -0.47
TUBA1A-208	ENST00000550811	ZNF827	Q17R98	1081 aa		12.1	□□□□□ -0.47
TUBA1A-208	ENST00000550811	ZKSCAN2	Q63HK3	967 aa		12.1	□□□□□ -0.47
TUBA1A-208	ENST00000550811	KIF6	Q6ZMV9	814 aa		12.1	□□□□□ -0.47
TUBA1A-208	ENST00000550811	LARP6	Q9BRS8	491 aa	Known RBP	12.1	□□□□□ -0.47
TUBA1A-208	ENST00000550811	RNF123	Q5XPI4	1314 aa		12.1	□□□□□ -0.47
TUBA1A-208	ENST00000550811	ADCY9	O60503	1353 aa		12.09	□□□□□ -0.47
TUBA1A-208	ENST00000550811		A0A087WZG4	1122 aa		12.09	□□□□□ -0.47
TUBA1A-208	ENST00000550811	PHF14	O94880	888 aa		12.09	□□□□□ -0.47
TUBA1A-208	ENST00000550811	TRIM27	P14373	513 aa		12.09	□□□□□ -0.47
TUBA1A-208	ENST00000550811	ATF7IP	Q6VMQ6	1270 aa		12.09	□□□□□ -0.47
TUBA1A-208	ENST00000550811	COPS6	Q7L5N1	327 aa		12.09	□□□□□ -0.47
TUBA1A-208	ENST00000550811	DZIP3	Q86Y13	1208 aa	Known RBP	12.09	□□□□□ -0.47
TUBA1A-208	ENST00000550811	ARHGAP45	Q92619	1136 aa		12.09	□□□□□ -0.47
TUBA1A-208	ENST00000550811	API5	Q9BZZ5	524 aa	Known RBP	12.09	□□□□□ -0.47
TUBA1A-208	ENST00000550811	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.09	□□□□□ -0.47
TUBA1A-208	ENST00000550811	STK32B	Q9NY57	414 aa		12.09	□□□□□ -0.47
TUBA1A-208	ENST00000550811	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.09	□□□□□ -0.47
TUBA1A-208	ENST00000550811	NUP98	P52948	1817 aa		12.09	□□□□□ -0.47
TUBA1A-208	ENST00000550811	AFDN	P55196	1824 aa	Known RBP	12.09	□□□□□ -0.47
TUBA1A-208	ENST00000550811	PLIN1	O60240	522 aa		12.08	□□□□□ -0.48
TUBA1A-208	ENST00000550811	TTLL7	Q6ZT98	887 aa		12.08	□□□□□ -0.48
TUBA1A-208	ENST00000550811	FTSJ3	Q8IY81	847 aa	Known RBP	12.08	□□□□□ -0.48
TUBA1A-208	ENST00000550811	DDX27	Q96GQ7	796 aa	Known RBP	12.08	□□□□□ -0.48
TUBA1A-208	ENST00000550811	TFCP2L1	Q9NZI6	479 aa		12.08	□□□□□ -0.48
TUBA1A-208	ENST00000550811	ABCC4	O15439	1325 aa		12.08	□□□□□ -0.48
TUBA1A-208	ENST00000550811	MAP3K15	Q6ZN16	1313 aa		12.08	□□□□□ -0.48
TUBA1A-208	ENST00000550811	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.07	□□□□□ -0.48
TUBA1A-208	ENST00000550811	MS4A1	P11836	297 aa		12.07	□□□□□ -0.48
TUBA1A-208	ENST00000550811	KSR2	Q6VAB6	950 aa		12.07	□□□□□ -0.48
TUBA1A-208	ENST00000550811	RIC3	Q7Z5B4	369 aa		12.07	□□□□□ -0.48
TUBA1A-208	ENST00000550811	AMIGO3	Q86WK7	504 aa		12.07	□□□□□ -0.48
TUBA1A-208	ENST00000550811	PLBD2	Q8NHP8	589 aa		12.07	□□□□□ -0.48
TUBA1A-208	ENST00000550811	ZBTB3	Q9H5J0	574 aa		12.07	□□□□□ -0.48
TUBA1A-208	ENST00000550811	ATP10D	Q9P241	1426 aa		12.06	□□□□□ -0.48
TUBA1A-208	ENST00000550811	PI4KAP2	A4QPH2	592 aa		12.06	□□□□□ -0.48
TUBA1A-208	ENST00000550811		F6X3S4	739 aa		12.06	□□□□□ -0.48
TUBA1A-208	ENST00000550811	SLC15A2	Q16348	729 aa		12.06	□□□□□ -0.48
TUBA1A-208	ENST00000550811	TRAPPC3L	Q5T215	181 aa		12.06	□□□□□ -0.48
TUBA1A-208	ENST00000550811	ANKRD13D	Q6ZTN6	518 aa		12.06	□□□□□ -0.48
TUBA1A-208	ENST00000550811	PI4KAP1	Q8N8J0	262 aa		12.06	□□□□□ -0.48
TUBA1A-208	ENST00000550811	FLAD1	Q8NFF5	587 aa		12.06	□□□□□ -0.48
TUBA1A-208	ENST00000550811	DNAAF4	Q8WXU2	420 aa		12.06	□□□□□ -0.48
TUBA1A-208	ENST00000550811	TBC1D2B	Q9UPU7	963 aa		12.06	□□□□□ -0.48
TUBA1A-208	ENST00000550811	MAP3K2	Q9Y2U5	619 aa		12.06	□□□□□ -0.48
TUBA1A-208	ENST00000550811	PNPLA7	Q6ZV29	1317 aa		12.06	□□□□□ -0.48
TUBA1A-208	ENST00000550811	USP42	Q9H9J4	1324 aa	Known RBP	12.06	□□□□□ -0.48
TUBA1A-208	ENST00000550811	ERVV-1	B6SEH8	477 aa		12.05	□□□□□ -0.48
TUBA1A-208	ENST00000550811	ZPR1	O75312	459 aa		12.05	□□□□□ -0.48
TUBA1A-208	ENST00000550811	CAMTA2	O94983	1202 aa		12.05	□□□□□ -0.48
TUBA1A-208	ENST00000550811	RFC4	P35249	363 aa		12.05	□□□□□ -0.48
TUBA1A-208	ENST00000550811	SLC4A10	Q6U841	1118 aa		12.05	□□□□□ -0.48
TUBA1A-208	ENST00000550811	SMIM5	Q71RC9	77 aa		12.05	□□□□□ -0.48
TUBA1A-208	ENST00000550811	DZIP1L	Q8IYY4	767 aa	Known RBP	12.05	□□□□□ -0.48
TUBA1A-208	ENST00000550811	KRI1	Q8N9T8	703 aa	Known RBP	12.05	□□□□□ -0.48
TUBA1A-208	ENST00000550811	CLUAP1	Q96AJ1	413 aa		12.05	□□□□□ -0.48
TUBA1A-208	ENST00000550811	NARF	Q9UHQ1	456 aa		12.05	□□□□□ -0.48
TUBA1A-208	ENST00000550811	TNN	Q9UQP3	1299 aa		12.05	□□□□□ -0.48
TUBA1A-208	ENST00000550811	ZNF652	Q9Y2D9	606 aa		12.05	□□□□□ -0.48
TUBA1A-208	ENST00000550811	COL24A1	Q17RW2	1714 aa		12.05	□□□□□ -0.48
TUBA1A-208	ENST00000550811	POTEI	P0CG38	1075 aa		12.04	□□□□□ -0.48
TUBA1A-208	ENST00000550811	NEXN	Q0ZGT2	675 aa		12.04	□□□□□ -0.48
TUBA1A-208	ENST00000550811	PDE3A	Q14432	1141 aa		12.04	□□□□□ -0.48
TUBA1A-208	ENST00000550811	HSP90AB3P	Q58FF7	597 aa		12.04	□□□□□ -0.48
TUBA1A-208	ENST00000550811	METTL22	Q9BUU2	404 aa	Predicted RBP	12.04	□□□□□ -0.48
TUBA1A-208	ENST00000550811	CASZ1	Q86V15	1759 aa		12.04	□□□□□ -0.48
TUBA1A-208	ENST00000550811	RLBP1	P12271	317 aa		12.03	□□□□□ -0.48
TUBA1A-208	ENST00000550811	CCT4	P50991	539 aa	Known RBP	12.03	□□□□□ -0.48
TUBA1A-208	ENST00000550811	CAMK2B	Q13554	666 aa		12.03	□□□□□ -0.48
TUBA1A-208	ENST00000550811	HLF	Q16534	295 aa		12.03	□□□□□ -0.48
TUBA1A-208	ENST00000550811	C20orf194	Q5TEA3	1177 aa		12.03	□□□□□ -0.48
TUBA1A-208	ENST00000550811	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.03	□□□□□ -0.48
TUBA1A-208	ENST00000550811	PANK1	Q8TE04	598 aa		12.03	□□□□□ -0.48
TUBA1A-208	ENST00000550811	MYD88	Q99836	296 aa		12.03	□□□□□ -0.48
TUBA1A-208	ENST00000550811	SRP68	Q9UHB9	627 aa	Known RBP	12.03	□□□□□ -0.48
TUBA1A-208	ENST00000550811	BEND3	Q5T5X7	828 aa		12.02	□□□□□ -0.49
TUBA1A-208	ENST00000550811	USPL1	Q5W0Q7	1092 aa		12.02	□□□□□ -0.49
TUBA1A-208	ENST00000550811	POTEG	Q6S5H5	508 aa		12.02	□□□□□ -0.49
TUBA1A-208	ENST00000550811	CLEC4G	Q6UXB4	293 aa		12.02	□□□□□ -0.49
TUBA1A-208	ENST00000550811	COL23A1	Q86Y22	540 aa	Predicted RBP	12.02	□□□□□ -0.49
TUBA1A-208	ENST00000550811	IFNL1	Q8IU54	200 aa		12.02	□□□□□ -0.49
TUBA1A-208	ENST00000550811	ITPRIP	Q8IWB1	547 aa		12.02	□□□□□ -0.49
TUBA1A-208	ENST00000550811	TMEM57	Q8N5G2	664 aa		12.02	□□□□□ -0.49
TUBA1A-208	ENST00000550811	LINS1	Q8NG48	757 aa		12.02	□□□□□ -0.49
TUBA1A-208	ENST00000550811	SRCIN1	Q9C0H9	1055 aa		12.02	□□□□□ -0.49
TUBA1A-208	ENST00000550811	CRISPLD2	Q9H0B8	497 aa		12.02	□□□□□ -0.49
TUBA1A-208	ENST00000550811	NEFL	P07196	543 aa		12.01	□□□□□ -0.49
TUBA1A-208	ENST00000550811	TCIRG1	Q13488	830 aa		12.01	□□□□□ -0.49
TUBA1A-208	ENST00000550811	MVP	Q14764	893 aa	Known RBP	12.01	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms