RNA–Protein interactions for RNA: ENST00000550661.1

PTPRR-210, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 3

Gene PTPRR, Length 1,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-210ENST00000550661 U2AF1Q01081 240 aaKnown RBP eCLIP7.89□□□□□ -1.15
PTPRR-210ENST00000550661 GUCA2AQ02747 115 aa7.89□□□□□ -1.15
PTPRR-210ENST00000550661 USHBP1Q8N6Y0 703 aa7.89□□□□□ -1.15
PTPRR-210ENST00000550661 RAPGEF4Q8WZA2 1011 aa7.89□□□□□ -1.15
PTPRR-210ENST00000550661 THAP11Q96EK4 314 aa7.89□□□□□ -1.15
PTPRR-210ENST00000550661 QTRT2Q9H974 415 aaKnown RBP7.89□□□□□ -1.15
PTPRR-210ENST00000550661 USP35Q9P2H5 1018 aa7.89□□□□□ -1.15
PTPRR-210ENST00000550661 RGS20O76081 388 aa7.88□□□□□ -1.15
PTPRR-210ENST00000550661 RXRBP28702 533 aa7.88□□□□□ -1.15
PTPRR-210ENST00000550661 Q3C1V9 767 aa7.88□□□□□ -1.15
PTPRR-210ENST00000550661 SULT6B1Q6IMI4 303 aa7.88□□□□□ -1.15
PTPRR-210ENST00000550661 BRICD5Q6PL45 260 aa7.88□□□□□ -1.15
PTPRR-210ENST00000550661 RNF19BQ6ZMZ0 732 aa7.88□□□□□ -1.15
PTPRR-210ENST00000550661 AEBP1Q8IUX7 1158 aa7.88□□□□□ -1.15
PTPRR-210ENST00000550661 SLC6A16Q9GZN6 736 aa7.88□□□□□ -1.15
PTPRR-210ENST00000550661 RSPH6AQ9H0K4 717 aa7.88□□□□□ -1.15
PTPRR-210ENST00000550661 SALL2Q9Y467 1007 aaPredicted RBP7.88□□□□□ -1.15
PTPRR-210ENST00000550661 RGPD2P0DJD1 1756 aa7.88□□□□□ -1.15
PTPRR-210ENST00000550661 PCDH11XQ9BZA7 1347 aa7.87□□□□□ -1.15
PTPRR-210ENST00000550661 PCDH11YQ9BZA8 1340 aa7.87□□□□□ -1.15
PTPRR-210ENST00000550661 EP400Q96L91 3159 aa7.87□□□□□ -1.15
PTPRR-210ENST00000550661 TATP17735 454 aaPredicted RBP7.87□□□□□ -1.15
PTPRR-210ENST00000550661 POTEAQ6S8J7 498 aa7.87□□□□□ -1.15
PTPRR-210ENST00000550661 TBC1D2Q9BYX2 928 aa7.87□□□□□ -1.15
PTPRR-210ENST00000550661 PNNQ9H307 717 aaKnown RBP7.87□□□□□ -1.15
PTPRR-210ENST00000550661 SHANK3Q9BYB0 1731 aa7.86□□□□□ -1.15
PTPRR-210ENST00000550661 MAPK8IP3Q9UPT6 1336 aa7.86□□□□□ -1.15
PTPRR-210ENST00000550661 RNF223E7ERA6 249 aa7.86□□□□□ -1.15
PTPRR-210ENST00000550661 PPEF1O14829 653 aaPredicted RBP7.86□□□□□ -1.15
PTPRR-210ENST00000550661 NEFMP07197 916 aa7.86□□□□□ -1.15
PTPRR-210ENST00000550661 HMOX1P09601 288 aa7.86□□□□□ -1.15
PTPRR-210ENST00000550661 FDX1P10109 184 aa7.86□□□□□ -1.15
PTPRR-210ENST00000550661 NDUFV2P19404 249 aa7.86□□□□□ -1.15
PTPRR-210ENST00000550661 PRKAR2BP31323 418 aa7.86□□□□□ -1.15
PTPRR-210ENST00000550661 DIXDC1Q155Q3 683 aa7.86□□□□□ -1.15
PTPRR-210ENST00000550661 AMOTQ4VCS5 1084 aa7.86□□□□□ -1.15
PTPRR-210ENST00000550661 CCDC184Q52MB2 194 aa7.86□□□□□ -1.15
PTPRR-210ENST00000550661 PNISRQ8TF01 805 aaKnown RBP7.86□□□□□ -1.15
PTPRR-210ENST00000550661 GPBP1L1Q9HC44 474 aaPredicted RBP7.86□□□□□ -1.15
PTPRR-210ENST00000550661 BCL9O00512 1426 aa7.86□□□□□ -1.15
PTPRR-210ENST00000550661 MOXD2PA6NHM9 499 aa7.85□□□□□ -1.15
PTPRR-210ENST00000550661 MYT1Q01538 1121 aa7.85□□□□□ -1.15
PTPRR-210ENST00000550661 DDB1Q16531 1140 aa7.85□□□□□ -1.15
PTPRR-210ENST00000550661 SEPT12Q8IYM1 358 aa7.85□□□□□ -1.15
PTPRR-210ENST00000550661 FAM160A2Q8N612 972 aaPredicted RBP7.85□□□□□ -1.15
PTPRR-210ENST00000550661 SPG7Q9UQ90 795 aa7.85□□□□□ -1.15
PTPRR-210ENST00000550661 MRC1P22897 1456 aa7.84□□□□□ -1.15
PTPRR-210ENST00000550661 PLEKHO1Q53GL0 409 aaPredicted RBP7.84□□□□□ -1.15
PTPRR-210ENST00000550661 GAS2L2Q8NHY3 880 aa7.84□□□□□ -1.15
PTPRR-210ENST00000550661 ZCRB1Q8TBF4 217 aaKnown RBP7.84□□□□□ -1.15
PTPRR-210ENST00000550661 PLEKHF1Q96S99 279 aa7.84□□□□□ -1.15
PTPRR-210ENST00000550661 KDM4CQ9H3R0 1056 aa7.84□□□□□ -1.15
PTPRR-210ENST00000550661 ADAMTS8Q9UP79 889 aa7.84□□□□□ -1.15
PTPRR-210ENST00000550661 MAP3K5Q99683 1374 aa7.84□□□□□ -1.16
PTPRR-210ENST00000550661 ADAMTS7Q9UKP4 1686 aa7.83□□□□□ -1.16
PTPRR-210ENST00000550661 EXOC5O00471 708 aa7.83□□□□□ -1.16
PTPRR-210ENST00000550661 MSS51Q4VC12 460 aa7.83□□□□□ -1.16
PTPRR-210ENST00000550661 ZNF530Q6P9A1 599 aaPredicted RBP7.83□□□□□ -1.16
PTPRR-210ENST00000550661 ANKLE1Q8NAG6 615 aa7.83□□□□□ -1.16
PTPRR-210ENST00000550661 SYMPKQ92797 1274 aaKnown RBP7.83□□□□□ -1.16
PTPRR-210ENST00000550661 RUNDC1Q96C34 613 aa7.83□□□□□ -1.16
PTPRR-210ENST00000550661 USB1Q9BQ65 265 aaKnown RBP7.83□□□□□ -1.16
PTPRR-210ENST00000550661 PRKD2Q9BZL6 878 aa7.83□□□□□ -1.16
PTPRR-210ENST00000550661 PRDM9Q9NQV7 894 aa7.83□□□□□ -1.16
PTPRR-210ENST00000550661 PCDHGC3Q9UN70 934 aa7.83□□□□□ -1.16
PTPRR-210ENST00000550661 C6orf229H3BNL8 230 aa7.82□□□□□ -1.16
PTPRR-210ENST00000550661 HSP90AB1P08238 724 aaKnown RBP7.82□□□□□ -1.16
PTPRR-210ENST00000550661 PHKG2P15735 406 aa7.82□□□□□ -1.16
PTPRR-210ENST00000550661 PDE3BQ13370 1112 aa7.82□□□□□ -1.16
PTPRR-210ENST00000550661 AKAP4Q5JQC9 854 aa7.82□□□□□ -1.16
PTPRR-210ENST00000550661 C1orf141Q5JVX7 400 aa7.82□□□□□ -1.16
PTPRR-210ENST00000550661 KRT27Q7Z3Y8 459 aa7.82□□□□□ -1.16
PTPRR-210ENST00000550661 IFNL2Q8IZJ0 200 aa7.82□□□□□ -1.16
PTPRR-210ENST00000550661 NHSQ6T4R5 1651 aa7.82□□□□□ -1.16
PTPRR-210ENST00000550661 DOT1LQ8TEK3 1739 aa7.81□□□□□ -1.16
PTPRR-210ENST00000550661 TOGARAM1Q9Y4F4 1720 aa7.81□□□□□ -1.16
PTPRR-210ENST00000550661 KDM6AO15550 1401 aaPredicted RBP7.81□□□□□ -1.16
PTPRR-210ENST00000550661 CYP27B1O15528 508 aa7.81□□□□□ -1.16
PTPRR-210ENST00000550661 LMOD3Q0VAK6 560 aa7.81□□□□□ -1.16
PTPRR-210ENST00000550661 NEUROD2Q15784 382 aa7.81□□□□□ -1.16
PTPRR-210ENST00000550661 NFE2L2Q16236 605 aa7.81□□□□□ -1.16
PTPRR-210ENST00000550661 MTHFSDQ2M296 383 aaKnown RBP7.81□□□□□ -1.16
PTPRR-210ENST00000550661 RSBN1LQ6PCB5 846 aaPredicted RBP7.81□□□□□ -1.16
PTPRR-210ENST00000550661 CCDC146Q8IYE0 955 aa7.81□□□□□ -1.16
PTPRR-210ENST00000550661 FAM9BQ8IZU0 186 aa7.81□□□□□ -1.16
PTPRR-210ENST00000550661 PHACTR3Q96KR7 559 aa7.81□□□□□ -1.16
PTPRR-210ENST00000550661 BRWD3Q6RI45 1802 aa7.8□□□□□ -1.16
PTPRR-210ENST00000550661 HTATSF1O43719 755 aaKnown RBP7.8□□□□□ -1.16
PTPRR-210ENST00000550661 MYSM1Q5VVJ2 828 aa7.8□□□□□ -1.16
PTPRR-210ENST00000550661 RIC3Q7Z5B4 369 aa7.8□□□□□ -1.16
PTPRR-210ENST00000550661 NGEFQ8N5V2 710 aa7.8□□□□□ -1.16
PTPRR-210ENST00000550661 MARCH10Q8NA82 808 aaPredicted RBP7.8□□□□□ -1.16
PTPRR-210ENST00000550661 DCAF5Q96JK2 942 aa7.8□□□□□ -1.16
PTPRR-210ENST00000550661 CEMIPQ8WUJ3 1361 aa7.8□□□□□ -1.16
PTPRR-210ENST00000550661 GNAT3A8MTJ3 354 aa7.79□□□□□ -1.16
PTPRR-210ENST00000550661 SPTLC1O15269 473 aa7.79□□□□□ -1.16
PTPRR-210ENST00000550661 PRKCSHP14314 528 aaPredicted RBP7.79□□□□□ -1.16
PTPRR-210ENST00000550661 GJA5P36382 358 aa7.79□□□□□ -1.16
PTPRR-210ENST00000550661 TMPOP42166 694 aaKnown RBP7.79□□□□□ -1.16
PTPRR-210ENST00000550661 FAM196AQ6ZSG2 479 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms