RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 CYP4X1Q8N118 509 aa8.06□□□□□ -1.12
RAB3IP-213ENST00000550647 SUSD3Q96L08 255 aa8.06□□□□□ -1.12
RAB3IP-213ENST00000550647 SPG7Q9UQ90 795 aa8.06□□□□□ -1.12
RAB3IP-213ENST00000550647 TTC24A2A3L6 582 aaPredicted RBP8.05□□□□□ -1.12
RAB3IP-213ENST00000550647 CTSHP09668 335 aa8.05□□□□□ -1.12
RAB3IP-213ENST00000550647 INPP5BP32019 993 aa8.05□□□□□ -1.12
RAB3IP-213ENST00000550647 PDE12Q6L8Q7 609 aaKnown RBP8.05□□□□□ -1.12
RAB3IP-213ENST00000550647 TINF2Q9BSI4 451 aa8.05□□□□□ -1.12
RAB3IP-213ENST00000550647 C11orf16Q9NQ32 467 aa8.05□□□□□ -1.12
RAB3IP-213ENST00000550647 TATP17735 454 aaPredicted RBP8.04□□□□□ -1.12
RAB3IP-213ENST00000550647 ATP4AP20648 1035 aa8.04□□□□□ -1.12
RAB3IP-213ENST00000550647 IDH3AP50213 366 aa8.04□□□□□ -1.12
RAB3IP-213ENST00000550647 ARSDP51689 593 aa8.04□□□□□ -1.12
RAB3IP-213ENST00000550647 PTPN12Q05209 780 aaKnown RBP8.04□□□□□ -1.12
RAB3IP-213ENST00000550647 TTC16Q8NEE8 873 aa8.04□□□□□ -1.12
RAB3IP-213ENST00000550647 SNX29Q8TEQ0 813 aa8.04□□□□□ -1.12
RAB3IP-213ENST00000550647 FNDC3AQ9Y2H6 1198 aaKnown RBP8.04□□□□□ -1.12
RAB3IP-213ENST00000550647 POTECB2RU33 542 aa8.03□□□□□ -1.12
RAB3IP-213ENST00000550647 C8orf34Q49A92 452 aa8.03□□□□□ -1.12
RAB3IP-213ENST00000550647 C9orf131Q5VYM1 1079 aa8.03□□□□□ -1.12
RAB3IP-213ENST00000550647 INSM2Q96T92 566 aaPredicted RBP8.03□□□□□ -1.12
RAB3IP-213ENST00000550647 NLRP2Q9NX02 1062 aa8.03□□□□□ -1.12
RAB3IP-213ENST00000550647 TNFRSF21O75509 655 aa8.02□□□□□ -1.13
RAB3IP-213ENST00000550647 EIF4BP23588 611 aaKnown RBP8.02□□□□□ -1.13
RAB3IP-213ENST00000550647 LINC00528Q8N1L1 170 aa8.02□□□□□ -1.13
RAB3IP-213ENST00000550647 ZNF280CQ8ND82 737 aa8.02□□□□□ -1.13
RAB3IP-213ENST00000550647 GMLQ99445 158 aa8.02□□□□□ -1.13
RAB3IP-213ENST00000550647 SRCIN1Q9C0H9 1055 aa8.02□□□□□ -1.13
RAB3IP-213ENST00000550647 C12orf49Q9H741 205 aa8.02□□□□□ -1.13
RAB3IP-213ENST00000550647 USP31Q70CQ4 1352 aa8.01□□□□□ -1.13
RAB3IP-213ENST00000550647 NRG2O14511 850 aaPredicted RBP8.01□□□□□ -1.13
RAB3IP-213ENST00000550647 EGFRP00533 1210 aa8.01□□□□□ -1.13
RAB3IP-213ENST00000550647 BTLAQ7Z6A9 289 aa8.01□□□□□ -1.13
RAB3IP-213ENST00000550647 RNF217Q8TC41 542 aa8.01□□□□□ -1.13
RAB3IP-213ENST00000550647 ARMC5Q96C12 935 aa8.01□□□□□ -1.13
RAB3IP-213ENST00000550647 ZIC5Q96T25 663 aa8.01□□□□□ -1.13
RAB3IP-213ENST00000550647 KCNMB2Q9Y691 235 aa8.01□□□□□ -1.13
RAB3IP-213ENST00000550647 A0A1B0GTH6 734 aa8□□□□□ -1.13
RAB3IP-213ENST00000550647 GFRA3O60609 400 aa8□□□□□ -1.13
RAB3IP-213ENST00000550647 CTSOP43234 321 aaPredicted RBP8□□□□□ -1.13
RAB3IP-213ENST00000550647 TRIP4Q15650 581 aaPredicted RBP8□□□□□ -1.13
RAB3IP-213ENST00000550647 TRIM67Q6ZTA4 783 aa8□□□□□ -1.13
RAB3IP-213ENST00000550647 CCDC74AQ96AQ1 378 aa8□□□□□ -1.13
RAB3IP-213ENST00000550647 KLRG1Q96E93 195 aa8□□□□□ -1.13
RAB3IP-213ENST00000550647 HSH2DQ96JZ2 352 aa8□□□□□ -1.13
RAB3IP-213ENST00000550647 CCSER2Q9H7U1 834 aa8□□□□□ -1.13
RAB3IP-213ENST00000550647 ZFYVE28Q9HCC9 887 aa8□□□□□ -1.13
RAB3IP-213ENST00000550647 RTCBQ9Y3I0 505 aaKnown RBP8□□□□□ -1.13
RAB3IP-213ENST00000550647 A6NHS1 94 aa7.99□□□□□ -1.13
RAB3IP-213ENST00000550647 ST13P50502 369 aaKnown RBP7.99□□□□□ -1.13
RAB3IP-213ENST00000550647 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.99□□□□□ -1.13
RAB3IP-213ENST00000550647 HPS1Q92902 700 aa7.99□□□□□ -1.13
RAB3IP-213ENST00000550647 AIDAQ96BJ3 306 aa7.99□□□□□ -1.13
RAB3IP-213ENST00000550647 CRISPLD1Q9H336 500 aa7.99□□□□□ -1.13
RAB3IP-213ENST00000550647 POLMQ9NP87 494 aaPredicted RBP7.99□□□□□ -1.13
RAB3IP-213ENST00000550647 FOXD3Q9UJU5 478 aaPredicted RBP7.99□□□□□ -1.13
RAB3IP-213ENST00000550647 DDX41Q9UJV9 622 aaKnown RBP7.99□□□□□ -1.13
RAB3IP-213ENST00000550647 PDZRN3Q9UPQ7 1066 aa7.99□□□□□ -1.13
RAB3IP-213ENST00000550647 UPP2O95045 317 aa7.98□□□□□ -1.13
RAB3IP-213ENST00000550647 EPB42P16452 691 aa7.98□□□□□ -1.13
RAB3IP-213ENST00000550647 TYRO3Q06418 890 aa7.98□□□□□ -1.13
RAB3IP-213ENST00000550647 ZNF438Q7Z4V0 828 aa7.98□□□□□ -1.13
RAB3IP-213ENST00000550647 OSBPL7Q9BZF2 842 aa7.98□□□□□ -1.13
RAB3IP-213ENST00000550647 ELP3Q9H9T3 547 aa7.98□□□□□ -1.13
RAB3IP-213ENST00000550647 FAM8A1Q9UBU6 413 aa7.98□□□□□ -1.13
RAB3IP-213ENST00000550647 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.98□□□□□ -1.13
RAB3IP-213ENST00000550647 CAPN5O15484 640 aaPredicted RBP7.97□□□□□ -1.13
RAB3IP-213ENST00000550647 GRNP28799 593 aaKnown RBP7.97□□□□□ -1.13
RAB3IP-213ENST00000550647 POU4F2Q12837 409 aa7.97□□□□□ -1.13
RAB3IP-213ENST00000550647 SAMD5Q5TGI4 173 aa7.97□□□□□ -1.13
RAB3IP-213ENST00000550647 USPL1Q5W0Q7 1092 aa7.97□□□□□ -1.13
RAB3IP-213ENST00000550647 Q6ZNB5 142 aa7.97□□□□□ -1.13
RAB3IP-213ENST00000550647 BICDL1Q6ZP65 573 aa7.97□□□□□ -1.13
RAB3IP-213ENST00000550647 LYSMD3Q7Z3D4 306 aa7.97□□□□□ -1.13
RAB3IP-213ENST00000550647 GALNT12Q8IXK2 581 aa7.97□□□□□ -1.13
RAB3IP-213ENST00000550647 UBAP1LF5GYI3 381 aa7.96□□□□□ -1.14
RAB3IP-213ENST00000550647 TNFRSF10AO00220 468 aa7.96□□□□□ -1.14
RAB3IP-213ENST00000550647 PHACTR2O75167 634 aa7.96□□□□□ -1.14
RAB3IP-213ENST00000550647 MSX1P28360 303 aa7.96□□□□□ -1.14
RAB3IP-213ENST00000550647 PHKA2P46019 1235 aa7.96□□□□□ -1.14
RAB3IP-213ENST00000550647 VEGFBP49765 207 aa7.96□□□□□ -1.14
RAB3IP-213ENST00000550647 GNL2Q13823 731 aaKnown RBP7.96□□□□□ -1.14
RAB3IP-213ENST00000550647 ZNF654Q8IZM8 581 aa7.96□□□□□ -1.14
RAB3IP-213ENST00000550647 CHRDQ9H2X0 955 aa7.96□□□□□ -1.14
RAB3IP-213ENST00000550647 CANXP27824 592 aaKnown RBP7.95□□□□□ -1.14
RAB3IP-213ENST00000550647 KCNQ4P56696 695 aa7.95□□□□□ -1.14
RAB3IP-213ENST00000550647 HS2ST1Q7LGA3 356 aa7.95□□□□□ -1.14
RAB3IP-213ENST00000550647 NLRP8Q86W28 1048 aa7.95□□□□□ -1.14
RAB3IP-213ENST00000550647 EPS8L3Q8TE67 593 aaKnown RBP7.95□□□□□ -1.14
RAB3IP-213ENST00000550647 ANKRD24Q8TF21 1146 aa7.95□□□□□ -1.14
RAB3IP-213ENST00000550647 PMEPA1Q969W9 287 aa7.95□□□□□ -1.14
RAB3IP-213ENST00000550647 ACBD3Q9H3P7 528 aa7.95□□□□□ -1.14
RAB3IP-213ENST00000550647 SRA1Q9HD15 236 aaKnown RBP7.95□□□□□ -1.14
RAB3IP-213ENST00000550647 NEUROD4Q9HD90 331 aa7.95□□□□□ -1.14
RAB3IP-213ENST00000550647 TMEM63CQ9P1W3 806 aa7.95□□□□□ -1.14
RAB3IP-213ENST00000550647 A0A1W2PNR3 127 aa7.94□□□□□ -1.14
RAB3IP-213ENST00000550647 TAF1CQ15572 869 aaPredicted RBP7.94□□□□□ -1.14
RAB3IP-213ENST00000550647 PI16Q6UXB8 463 aa7.94□□□□□ -1.14
RAB3IP-213ENST00000550647 LRRC69Q6ZNQ3 347 aa7.94□□□□□ -1.14
RAB3IP-213ENST00000550647 CMTR1Q8N1G2 835 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms