RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 KAZALD1Q96I82 304 aa10.75□□□□□ -0.69
TMEM116-209ENST00000550020 GRPEL1Q9HAV7 217 aa10.75□□□□□ -0.69
TMEM116-209ENST00000550020 GPR108Q9NPR9 543 aa10.75□□□□□ -0.69
TMEM116-209ENST00000550020 FBXO3Q9UK99 471 aa10.75□□□□□ -0.69
TMEM116-209ENST00000550020 PALD1Q9ULE6 856 aa10.75□□□□□ -0.69
TMEM116-209ENST00000550020 PA2G4Q9UQ80 394 aaKnown RBP10.75□□□□□ -0.69
TMEM116-209ENST00000550020 CCDC171Q6TFL3 1326 aa10.75□□□□□ -0.69
TMEM116-209ENST00000550020 C5P01031 1676 aa10.75□□□□□ -0.69
TMEM116-209ENST00000550020 H7C1W4 665 aa10.74□□□□□ -0.69
TMEM116-209ENST00000550020 BRD1O95696 1058 aa10.74□□□□□ -0.69
TMEM116-209ENST00000550020 UBE3BQ7Z3V4 1068 aa10.74□□□□□ -0.69
TMEM116-209ENST00000550020 CHMP4CQ96CF2 233 aa10.74□□□□□ -0.69
TMEM116-209ENST00000550020 EAF2Q96CJ1 260 aaPredicted RBP10.74□□□□□ -0.69
TMEM116-209ENST00000550020 TMOD3Q9NYL9 352 aa10.74□□□□□ -0.69
TMEM116-209ENST00000550020 BRPF3Q9ULD4 1205 aa10.74□□□□□ -0.69
TMEM116-209ENST00000550020 CIAO1O76071 339 aa10.73□□□□□ -0.69
TMEM116-209ENST00000550020 PHF14O94880 888 aa10.73□□□□□ -0.69
TMEM116-209ENST00000550020 IL15P40933 162 aaPredicted RBP10.73□□□□□ -0.69
TMEM116-209ENST00000550020 TNNI3KQ59H18 835 aa10.73□□□□□ -0.69
TMEM116-209ENST00000550020 KIF6Q6ZMV9 814 aa10.73□□□□□ -0.69
TMEM116-209ENST00000550020 ZGPATQ8N5A5 531 aaKnown RBP10.73□□□□□ -0.69
TMEM116-209ENST00000550020 UPF3BQ9BZI7 483 aaKnown RBP10.73□□□□□ -0.69
TMEM116-209ENST00000550020 SIL1Q9H173 461 aa10.73□□□□□ -0.69
TMEM116-209ENST00000550020 ZSWIM6Q9HCJ5 1215 aa10.73□□□□□ -0.69
TMEM116-209ENST00000550020 PDRG1Q9NUG6 133 aa10.73□□□□□ -0.69
TMEM116-209ENST00000550020 FPGT-TNNI3KV9GXZ4 949 aa10.73□□□□□ -0.69
TMEM116-209ENST00000550020 TNS2Q63HR2 1409 aa10.73□□□□□ -0.69
TMEM116-209ENST00000550020 STARD3NLO95772 234 aa10.72□□□□□ -0.69
TMEM116-209ENST00000550020 XRCC6P12956 609 aaKnown RBP eCLIP10.72□□□□□ -0.69
TMEM116-209ENST00000550020 CASTP20810 708 aaKnown RBP10.72□□□□□ -0.69
TMEM116-209ENST00000550020 RFX5P48382 616 aaPredicted RBP10.72□□□□□ -0.69
TMEM116-209ENST00000550020 ZNF445P59923 1031 aa10.72□□□□□ -0.69
TMEM116-209ENST00000550020 PTPN12Q05209 780 aaKnown RBP10.72□□□□□ -0.69
TMEM116-209ENST00000550020 MAP4K1Q92918 833 aa10.72□□□□□ -0.69
TMEM116-209ENST00000550020 JAKMIP1Q96N16 626 aaKnown RBP10.72□□□□□ -0.69
TMEM116-209ENST00000550020 TTC14Q96N46 770 aa10.72□□□□□ -0.69
TMEM116-209ENST00000550020 CCDC8Q9H0W5 538 aaPredicted RBP10.72□□□□□ -0.69
TMEM116-209ENST00000550020 ALDH8A1Q9H2A2 487 aaPredicted RBP10.72□□□□□ -0.69
TMEM116-209ENST00000550020 LMBRD1Q9NUN5 540 aa10.72□□□□□ -0.69
TMEM116-209ENST00000550020 SMC3Q9UQE7 1217 aa10.72□□□□□ -0.69
TMEM116-209ENST00000550020 U3KPZ7 1027 aaPredicted RBP10.72□□□□□ -0.69
TMEM116-209ENST00000550020 PDCP20941 246 aa10.71□□□□□ -0.69
TMEM116-209ENST00000550020 AK2P54819 239 aa10.71□□□□□ -0.69
TMEM116-209ENST00000550020 TRIM28Q13263 835 aaKnown RBP10.71□□□□□ -0.69
TMEM116-209ENST00000550020 NMIQ13287 307 aaPredicted RBP10.71□□□□□ -0.69
TMEM116-209ENST00000550020 NECTIN1Q15223 517 aa10.71□□□□□ -0.69
TMEM116-209ENST00000550020 HSP90AB3PQ58FF7 597 aa10.71□□□□□ -0.69
TMEM116-209ENST00000550020 PRPF40BQ6NWY9 871 aaKnown RBP10.71□□□□□ -0.69
TMEM116-209ENST00000550020 RUFY3Q7L099 469 aa10.71□□□□□ -0.69
TMEM116-209ENST00000550020 DDX54Q8TDD1 881 aaKnown RBP10.71□□□□□ -0.69
TMEM116-209ENST00000550020 CDCA7Q9BWT1 371 aaPredicted RBP10.71□□□□□ -0.69
TMEM116-209ENST00000550020 STRN4Q9NRL3 753 aa10.71□□□□□ -0.69
TMEM116-209ENST00000550020 AKAP2Q9Y2D5 859 aa10.71□□□□□ -0.69
TMEM116-209ENST00000550020 RBM8AQ9Y5S9 174 aaKnown RBP10.71□□□□□ -0.69
TMEM116-209ENST00000550020 AK9Q5TCS8 1911 aa10.7□□□□□ -0.7
TMEM116-209ENST00000550020 KCPQ6ZWJ8 1503 aa10.7□□□□□ -0.7
TMEM116-209ENST00000550020 ZNF335Q9H4Z2 1342 aaPredicted RBP10.7□□□□□ -0.7
TMEM116-209ENST00000550020 ATP5J2-PTCD1G3V325 749 aa10.7□□□□□ -0.7
TMEM116-209ENST00000550020 PTCD1O75127 700 aaKnown RBP10.7□□□□□ -0.7
TMEM116-209ENST00000550020 PRPF40AO75400 957 aaKnown RBP10.7□□□□□ -0.7
TMEM116-209ENST00000550020 HMGB1P09429 215 aaKnown RBP10.7□□□□□ -0.7
TMEM116-209ENST00000550020 CASP7P55210 303 aa10.7□□□□□ -0.7
TMEM116-209ENST00000550020 TFCP2Q12800 502 aa10.7□□□□□ -0.7
TMEM116-209ENST00000550020 TSGA10IPQ3SY00 556 aa10.7□□□□□ -0.7
TMEM116-209ENST00000550020 EPHA10Q5JZY3 1008 aa10.7□□□□□ -0.7
TMEM116-209ENST00000550020 CREB3L3Q68CJ9 461 aa10.7□□□□□ -0.7
TMEM116-209ENST00000550020 BLOC1S2Q6QNY1 142 aa10.7□□□□□ -0.7
TMEM116-209ENST00000550020 LMBR1LQ6UX01 489 aa10.7□□□□□ -0.7
TMEM116-209ENST00000550020 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.7□□□□□ -0.7
TMEM116-209ENST00000550020 TRIM44Q96DX7 344 aaPredicted RBP10.7□□□□□ -0.7
TMEM116-209ENST00000550020 HAUS7Q99871 368 aa10.7□□□□□ -0.7
TMEM116-209ENST00000550020 BOLA2Q9H3K6 86 aa10.7□□□□□ -0.7
TMEM116-209ENST00000550020 XIRP1Q702N8 1843 aaKnown RBP10.7□□□□□ -0.7
TMEM116-209ENST00000550020 ARFGEF2Q9Y6D5 1785 aa10.7□□□□□ -0.7
TMEM116-209ENST00000550020 PAPPAQ13219 1627 aa10.69□□□□□ -0.7
TMEM116-209ENST00000550020 MED23Q9ULK4 1368 aa10.69□□□□□ -0.7
TMEM116-209ENST00000550020 NBPF26B4DH59 902 aa10.69□□□□□ -0.7
TMEM116-209ENST00000550020 EYA2O00167 538 aa10.69□□□□□ -0.7
TMEM116-209ENST00000550020 LETM1O95202 739 aaPredicted RBP10.69□□□□□ -0.7
TMEM116-209ENST00000550020 FOXO4P98177 505 aa10.69□□□□□ -0.7
TMEM116-209ENST00000550020 CCDC173Q0VFZ6 552 aa10.69□□□□□ -0.7
TMEM116-209ENST00000550020 TCIRG1Q13488 830 aa10.69□□□□□ -0.7
TMEM116-209ENST00000550020 NBPF14Q5TI25 921 aa10.69□□□□□ -0.7
TMEM116-209ENST00000550020 NBPF10Q6P3W6 841 aaKnown RBP10.69□□□□□ -0.7
TMEM116-209ENST00000550020 NOL8Q76FK4 1167 aaKnown RBP10.69□□□□□ -0.7
TMEM116-209ENST00000550020 NBPF15Q8N660 670 aa10.69□□□□□ -0.7
TMEM116-209ENST00000550020 HELLSQ9NRZ9 838 aa10.69□□□□□ -0.7
TMEM116-209ENST00000550020 ZDHHC9Q9Y397 364 aa10.69□□□□□ -0.7
TMEM116-209ENST00000550020 CHMP3Q9Y3E7 222 aa10.69□□□□□ -0.7
TMEM116-209ENST00000550020 UBR2Q8IWV8 1755 aa10.69□□□□□ -0.7
TMEM116-209ENST00000550020 NHSL1Q5SYE7 1610 aa10.69□□□□□ -0.7
TMEM116-209ENST00000550020 JCADQ9P266 1359 aa10.68□□□□□ -0.7
TMEM116-209ENST00000550020 SLC27A2O14975 620 aa10.68□□□□□ -0.7
TMEM116-209ENST00000550020 PCCAP05165 728 aaPredicted RBP10.68□□□□□ -0.7
TMEM116-209ENST00000550020 ZSCAN22P10073 491 aaPredicted RBP10.68□□□□□ -0.7
TMEM116-209ENST00000550020 PTH1RQ03431 593 aa10.68□□□□□ -0.7
TMEM116-209ENST00000550020 CCDC57Q2TAC2 916 aa10.68□□□□□ -0.7
TMEM116-209ENST00000550020 ZSCAN23Q3MJ62 389 aa10.68□□□□□ -0.7
TMEM116-209ENST00000550020 MCMDC2Q4G0Z9 681 aa10.68□□□□□ -0.7
TMEM116-209ENST00000550020 RASEFQ8IZ41 740 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms