RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 H0YIN7 160 aa24.73■■□□□ 1.55
DDX54-207ENST00000550016 ERFEQ4G0M1 354 aa24.73■■□□□ 1.55
DDX54-207ENST00000550016 C2CD5Q86YS7 1000 aa24.73■■□□□ 1.55
DDX54-207ENST00000550016 MYD88Q99836 296 aa24.73■■□□□ 1.55
DDX54-207ENST00000550016 COL11A2P13942 1736 aaPredicted RBP24.72■■□□□ 1.55
DDX54-207ENST00000550016 RNF123Q5XPI4 1314 aa24.72■■□□□ 1.55
DDX54-207ENST00000550016 ALDH1L2Q3SY69 923 aa24.72■■□□□ 1.55
DDX54-207ENST00000550016 MRPL50Q8N5N7 158 aaKnown RBP24.72■■□□□ 1.55
DDX54-207ENST00000550016 SSH1Q8WYL5 1049 aa24.72■■□□□ 1.55
DDX54-207ENST00000550016 PIM2Q9P1W9 311 aa24.72■■□□□ 1.55
DDX54-207ENST00000550016 ARFGEF1Q9Y6D6 1849 aa24.72■■□□□ 1.55
DDX54-207ENST00000550016 TRMT112Q9UI30 125 aaKnown RBP24.71■■□□□ 1.55
DDX54-207ENST00000550016 CACNA1SQ13698 1873 aa24.7■■□□□ 1.55
DDX54-207ENST00000550016 NEXNQ0ZGT2 675 aa24.7■■□□□ 1.54
DDX54-207ENST00000550016 WWC3Q9ULE0 1092 aa24.7■■□□□ 1.54
DDX54-207ENST00000550016 ABCC12Q96J65 1359 aa24.69■■□□□ 1.54
DDX54-207ENST00000550016 KLRG2A4D1S0 409 aaPredicted RBP24.69■■□□□ 1.54
DDX54-207ENST00000550016 YBX3P16989 372 aaKnown RBP eCLIP24.69■■□□□ 1.54
DDX54-207ENST00000550016 SLC10A5Q5PT55 438 aa24.69■■□□□ 1.54
DDX54-207ENST00000550016 CCDC191Q8NCU4 936 aa24.69■■□□□ 1.54
DDX54-207ENST00000550016 DNAAF4Q8WXU2 420 aa24.69■■□□□ 1.54
DDX54-207ENST00000550016 RIC1Q4ADV7 1423 aa24.69■■□□□ 1.54
DDX54-207ENST00000550016 TNRC6CQ9HCJ0 1690 aaKnown RBP24.69■■□□□ 1.54
DDX54-207ENST00000550016 LAMB2P55268 1798 aa24.68■■□□□ 1.54
DDX54-207ENST00000550016 SH3TC1Q8TE82 1336 aa24.67■■□□□ 1.54
DDX54-207ENST00000550016 CHD4Q14839 1912 aa24.67■■□□□ 1.54
DDX54-207ENST00000550016 SRGNP10124 158 aa24.67■■□□□ 1.54
DDX54-207ENST00000550016 DALRD3Q5D0E6 543 aaKnown RBP24.67■■□□□ 1.54
DDX54-207ENST00000550016 SMC4Q9NTJ3 1288 aa24.67■■□□□ 1.54
DDX54-207ENST00000550016 CWC25Q9NXE8 425 aaPredicted RBP24.67■■□□□ 1.54
DDX54-207ENST00000550016 DDX60Q8IY21 1712 aaKnown RBP24.66■■□□□ 1.54
DDX54-207ENST00000550016 GRIN3BO60391 1043 aa24.66■■□□□ 1.54
DDX54-207ENST00000550016 IGKV5-2P06315 115 aa24.66■■□□□ 1.54
DDX54-207ENST00000550016 STYK1Q6J9G0 422 aa24.66■■□□□ 1.54
DDX54-207ENST00000550016 SYNE4Q8N205 404 aa24.66■■□□□ 1.54
DDX54-207ENST00000550016 ZNF622Q969S3 477 aaKnown RBP eCLIP24.66■■□□□ 1.542e-6■■□□□ 14
DDX54-207ENST00000550016 BCL2L13Q9BXK5 485 aa24.66■■□□□ 1.54
DDX54-207ENST00000550016 BCS1LQ9Y276 419 aa24.66■■□□□ 1.54
DDX54-207ENST00000550016 TTLL6Q8N841 843 aa24.65■■□□□ 1.54
DDX54-207ENST00000550016 FAM89AQ96GI7 184 aa24.65■■□□□ 1.54
DDX54-207ENST00000550016 MASTLQ96GX5 879 aa24.65■■□□□ 1.54
DDX54-207ENST00000550016 SLX4Q8IY92 1834 aa24.64■■□□□ 1.54
DDX54-207ENST00000550016 F6X3S4 739 aa24.64■■□□□ 1.54
DDX54-207ENST00000550016 NPR1P16066 1061 aa24.64■■□□□ 1.54
DDX54-207ENST00000550016 RARSP54136 660 aaKnown RBP24.64■■□□□ 1.54
DDX54-207ENST00000550016 ZBTB38Q8NAP3 1195 aaPredicted RBP24.64■■□□□ 1.54
DDX54-207ENST00000550016 NLRP3Q96P20 1036 aa24.64■■□□□ 1.54
DDX54-207ENST00000550016 PTPRCP08575 1304 aa24.63■■□□□ 1.53
DDX54-207ENST00000550016 NEURL1BA8MQ27 555 aa24.63■■□□□ 1.53
DDX54-207ENST00000550016 HCLS1P14317 486 aaPredicted RBP24.63■■□□□ 1.53
DDX54-207ENST00000550016 BRPF1P55201 1214 aaPredicted RBP24.63■■□□□ 1.53
DDX54-207ENST00000550016 CWF19L2Q2TBE0 894 aaKnown RBP24.63■■□□□ 1.53
DDX54-207ENST00000550016 CRY2Q49AN0 593 aa24.63■■□□□ 1.53
DDX54-207ENST00000550016 LINS1Q8NG48 757 aa24.63■■□□□ 1.53
DDX54-207ENST00000550016 CNKSR1Q969H4 720 aa24.63■■□□□ 1.53
DDX54-207ENST00000550016 PCCAP05165 728 aaPredicted RBP24.62■■□□□ 1.53
DDX54-207ENST00000550016 MYH3P11055 1940 aa24.61■■□□□ 1.53
DDX54-207ENST00000550016 RTL5Q5HYW3 569 aaPredicted RBP24.61■■□□□ 1.53
DDX54-207ENST00000550016 C3orf67Q6ZVT6 689 aa24.6■■□□□ 1.53
DDX54-207ENST00000550016 RPGRQ92834 1020 aaKnown RBP24.6■■□□□ 1.53
DDX54-207ENST00000550016 IRS4O14654 1257 aaPredicted RBP24.59■■□□□ 1.53
DDX54-207ENST00000550016 HSP90B1P14625 803 aaKnown RBP24.59■■□□□ 1.53
DDX54-207ENST00000550016 ALDH1B1P30837 517 aa24.59■■□□□ 1.53
DDX54-207ENST00000550016 GCKRQ14397 625 aa24.59■■□□□ 1.53
DDX54-207ENST00000550016 BEND3Q5T5X7 828 aa24.59■■□□□ 1.53
DDX54-207ENST00000550016 HOXA10P31260 410 aaPredicted RBP24.58■■□□□ 1.53
DDX54-207ENST00000550016 SLC4A10Q6U841 1118 aa24.58■■□□□ 1.53
DDX54-207ENST00000550016 JARID2Q92833 1246 aaPredicted RBP24.58■■□□□ 1.53
DDX54-207ENST00000550016 RBM17Q96I25 401 aaKnown RBP24.57■■□□□ 1.52
DDX54-207ENST00000550016 NOB1Q9ULX3 412 aaKnown RBP24.57■■□□□ 1.52
DDX54-207ENST00000550016 TAF1P21675 1872 aa24.57■■□□□ 1.52
DDX54-207ENST00000550016 H7C1W4 665 aa24.56■■□□□ 1.52
DDX54-207ENST00000550016 PRPF40BQ6NWY9 871 aaKnown RBP24.56■■□□□ 1.52
DDX54-207ENST00000550016 CRAMP1Q96RY5 1269 aa24.56■■□□□ 1.52
DDX54-207ENST00000550016 CDHR2Q9BYE9 1310 aa24.56■■□□□ 1.52
DDX54-207ENST00000550016 ALDH1L1O75891 902 aa24.55■■□□□ 1.52
DDX54-207ENST00000550016 ARHGAP27Q6ZUM4 889 aa24.55■■□□□ 1.52
DDX54-207ENST00000550016 SRCIN1Q9C0H9 1055 aa24.55■■□□□ 1.52
DDX54-207ENST00000550016 KIF16BQ96L93 1317 aa24.55■■□□□ 1.52
DDX54-207ENST00000550016 GOLGB1Q14789 3259 aaKnown RBP24.54■■□□□ 1.52
DDX54-207ENST00000550016 CCDC88AQ3V6T2 1871 aa24.54■■□□□ 1.52
DDX54-207ENST00000550016 PDE8AO60658 829 aa24.54■■□□□ 1.52
DDX54-207ENST00000550016 BCAR3O75815 825 aa24.54■■□□□ 1.52
DDX54-207ENST00000550016 SF3B3Q15393 1217 aaKnown RBP24.54■■□□□ 1.52
DDX54-207ENST00000550016 UBE3BQ7Z3V4 1068 aa24.54■■□□□ 1.52
DDX54-207ENST00000550016 SBF1O95248 1867 aa24.53■■□□□ 1.52
DDX54-207ENST00000550016 FER1L6Q2WGJ9 1857 aa24.53■■□□□ 1.52
DDX54-207ENST00000550016 ARHGAP45Q92619 1136 aa24.53■■□□□ 1.52
DDX54-207ENST00000550016 API5Q9BZZ5 524 aaKnown RBP24.53■■□□□ 1.52
DDX54-207ENST00000550016 IPO8O15397 1037 aaKnown RBP24.52■■□□□ 1.52
DDX54-207ENST00000550016 C21orf2O43822 256 aa24.52■■□□□ 1.52
DDX54-207ENST00000550016 DDX46Q7L014 1031 aaKnown RBP24.52■■□□□ 1.52
DDX54-207ENST00000550016 ZNF219Q9P2Y4 722 aaPredicted RBP24.52■■□□□ 1.52
DDX54-207ENST00000550016 C7orf43Q8WVR3 580 aa24.51■■□□□ 1.51
DDX54-207ENST00000550016 YTHDC1Q96MU7 727 aaKnown RBP24.51■■□□□ 1.51
DDX54-207ENST00000550016 CASP7P55210 303 aa24.5■■□□□ 1.51
DDX54-207ENST00000550016 SOGA3Q5TF21 947 aa24.5■■□□□ 1.51
DDX54-207ENST00000550016 GRM8O00222 908 aa24.49■■□□□ 1.51
DDX54-207ENST00000550016 C9orf78Q9NZ63 289 aaPredicted RBP24.49■■□□□ 1.51
DDX54-207ENST00000550016 ABCC4O15439 1325 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms