RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 DDNO94850 711 aaPredicted RBP20.8■□□□□ 0.92
COX6A1-203ENST00000550009 RBM46Q8TBY0 533 aaKnown RBP20.8■□□□□ 0.92
COX6A1-203ENST00000550009 NYXQ9GZU5 481 aa20.8■□□□□ 0.92
COX6A1-203ENST00000550009 ZNF853P0CG23 659 aa20.79■□□□□ 0.92
COX6A1-203ENST00000550009 CCDC93Q567U6 631 aa20.79■□□□□ 0.92
COX6A1-203ENST00000550009 DUSP27Q5VZP5 1158 aa20.79■□□□□ 0.92
COX6A1-203ENST00000550009 C16orf71Q8IYS4 520 aaPredicted RBP20.79■□□□□ 0.92
COX6A1-203ENST00000550009 DDX21Q9NR30 783 aaKnown RBP eCLIP20.79■□□□□ 0.92
COX6A1-203ENST00000550009 ZC3H4Q9UPT8 1303 aaKnown RBP20.78■□□□□ 0.92
COX6A1-203ENST00000550009 IBTKQ9P2D0 1353 aaPredicted RBP20.78■□□□□ 0.92
COX6A1-203ENST00000550009 ELL2O00472 640 aaPredicted RBP20.78■□□□□ 0.92
COX6A1-203ENST00000550009 POTEIP0CG38 1075 aa20.78■□□□□ 0.92
COX6A1-203ENST00000550009 POTEJP0CG39 1038 aa20.78■□□□□ 0.92
COX6A1-203ENST00000550009 HDGFL1Q5TGJ6 251 aa20.78■□□□□ 0.92
COX6A1-203ENST00000550009 CFAP44Q96MT7 982 aa20.78■□□□□ 0.92
COX6A1-203ENST00000550009 ZNF541Q9H0D2 1346 aa20.78■□□□□ 0.92
COX6A1-203ENST00000550009 HCLS1P14317 486 aaPredicted RBP20.76■□□□□ 0.91
COX6A1-203ENST00000550009 FKBP4Q02790 459 aaKnown RBP eCLIP20.76■□□□□ 0.91
COX6A1-203ENST00000550009 NLRP10Q86W26 655 aa20.76■□□□□ 0.91
COX6A1-203ENST00000550009 RIC1Q4ADV7 1423 aa20.76■□□□□ 0.91
COX6A1-203ENST00000550009 VEGFAP15692 232 aaPredicted RBP20.75■□□□□ 0.91
COX6A1-203ENST00000550009 DNAJC5GQ8N7S2 189 aa20.75■□□□□ 0.91
COX6A1-203ENST00000550009 C8orf58Q8NAV2 365 aa20.75■□□□□ 0.91
COX6A1-203ENST00000550009 RPGRQ92834 1020 aaKnown RBP20.75■□□□□ 0.91
COX6A1-203ENST00000550009 UTP14AQ9BVJ6 771 aaKnown RBP20.75■□□□□ 0.91
COX6A1-203ENST00000550009 ATP5J2-PTCD1G3V325 749 aa20.74■□□□□ 0.91
COX6A1-203ENST00000550009 ALDH1B1P30837 517 aa20.74■□□□□ 0.91
COX6A1-203ENST00000550009 HOXA10P31260 410 aaPredicted RBP20.74■□□□□ 0.91
COX6A1-203ENST00000550009 TCIRG1Q13488 830 aa20.74■□□□□ 0.91
COX6A1-203ENST00000550009 PPP1R42Q7Z4L9 355 aa20.74■□□□□ 0.91
COX6A1-203ENST00000550009 TSPYL6Q8N831 410 aa20.74■□□□□ 0.91
COX6A1-203ENST00000550009 SCN4AP35499 1836 aa20.74■□□□□ 0.91
COX6A1-203ENST00000550009 SOGA3Q5TF21 947 aa20.73■□□□□ 0.91
COX6A1-203ENST00000550009 PHAXQ9H814 394 aaKnown RBP20.73■□□□□ 0.91
COX6A1-203ENST00000550009 LTBP1Q14766 1721 aa20.73■□□□□ 0.91
COX6A1-203ENST00000550009 ZNF316A6NFI3 1004 aaPredicted RBP20.72■□□□□ 0.91
COX6A1-203ENST00000550009 APLP1P51693 650 aa20.72■□□□□ 0.91
COX6A1-203ENST00000550009 PARP10Q53GL7 1025 aa20.72■□□□□ 0.91
COX6A1-203ENST00000550009 TSR2Q969E8 191 aaKnown RBP20.72■□□□□ 0.91
COX6A1-203ENST00000550009 ABCC4O15439 1325 aa20.72■□□□□ 0.91
COX6A1-203ENST00000550009 IARSP41252 1262 aaKnown RBP20.71■□□□□ 0.91
COX6A1-203ENST00000550009 RTL5Q5HYW3 569 aaPredicted RBP20.71■□□□□ 0.91
COX6A1-203ENST00000550009 SLC10A5Q5PT55 438 aa20.71■□□□□ 0.91
COX6A1-203ENST00000550009 IFT57Q9NWB7 429 aa20.71■□□□□ 0.91
COX6A1-203ENST00000550009 PPEF1O14829 653 aaPredicted RBP20.7■□□□□ 0.9
COX6A1-203ENST00000550009 FSTL1Q12841 308 aa20.7■□□□□ 0.9
COX6A1-203ENST00000550009 DPY19L2Q6NUT2 758 aa20.7■□□□□ 0.9
COX6A1-203ENST00000550009 RTKN2Q8IZC4 609 aa20.7■□□□□ 0.9
COX6A1-203ENST00000550009 TRMT112Q9UI30 125 aaKnown RBP20.7■□□□□ 0.9
COX6A1-203ENST00000550009 ZEB1P37275 1124 aaPredicted RBP20.69■□□□□ 0.9
COX6A1-203ENST00000550009 ANKRD13DQ6ZTN6 518 aa20.69■□□□□ 0.9
COX6A1-203ENST00000550009 PLBD2Q8NHP8 589 aa20.69■□□□□ 0.9
COX6A1-203ENST00000550009 RBM17Q96I25 401 aaKnown RBP20.69■□□□□ 0.9
COX6A1-203ENST00000550009 NLRP3Q96P20 1036 aa20.69■□□□□ 0.9
COX6A1-203ENST00000550009 CRAMP1Q96RY5 1269 aa20.69■□□□□ 0.9
COX6A1-203ENST00000550009 ISCA1Q9BUE6 129 aa20.69■□□□□ 0.9
COX6A1-203ENST00000550009 DBF4Q9UBU7 674 aaPredicted RBP20.69■□□□□ 0.9
COX6A1-203ENST00000550009 HOXB7P09629 217 aa20.68■□□□□ 0.9
COX6A1-203ENST00000550009 GNAI1P63096 354 aa20.68■□□□□ 0.9
COX6A1-203ENST00000550009 SMC1BQ8NDV3 1235 aa20.68■□□□□ 0.9
COX6A1-203ENST00000550009 JARID2Q92833 1246 aaPredicted RBP20.68■□□□□ 0.9
COX6A1-203ENST00000550009 FAM89AQ96GI7 184 aa20.68■□□□□ 0.9
COX6A1-203ENST00000550009 SALL2Q9Y467 1007 aaPredicted RBP20.68■□□□□ 0.9
COX6A1-203ENST00000550009 ADAMTSL1Q8N6G6 1762 aa20.67■□□□□ 0.9
COX6A1-203ENST00000550009 SPEF2Q9C093 1822 aa20.67■□□□□ 0.9
COX6A1-203ENST00000550009 FZD9O00144 591 aa20.66■□□□□ 0.9
COX6A1-203ENST00000550009 HSP90AB3PQ58FF7 597 aa20.66■□□□□ 0.9
COX6A1-203ENST00000550009 PSMD1Q99460 953 aa20.66■□□□□ 0.9
COX6A1-203ENST00000550009 MRS2Q9HD23 443 aa20.66■□□□□ 0.9
COX6A1-203ENST00000550009 LRRC37AA6NMS7 1700 aa20.66■□□□□ 0.9
COX6A1-203ENST00000550009 DUOX1Q9NRD9 1551 aa20.65■□□□□ 0.9
COX6A1-203ENST00000550009 RNF123Q5XPI4 1314 aa20.65■□□□□ 0.9
COX6A1-203ENST00000550009 SH3TC1Q8TE82 1336 aa20.65■□□□□ 0.9
COX6A1-203ENST00000550009 HYPKQ9NX55 129 aa20.65■□□□□ 0.9
COX6A1-203ENST00000550009 WWC1Q8IX03 1113 aa20.64■□□□□ 0.89
COX6A1-203ENST00000550009 TAF1DQ9H5J8 278 aaPredicted RBP20.64■□□□□ 0.89
COX6A1-203ENST00000550009 AOC3Q16853 763 aa20.63■□□□□ 0.89
COX6A1-203ENST00000550009 L3MBTL3Q96JM7 780 aaPredicted RBP20.63■□□□□ 0.89
COX6A1-203ENST00000550009 MYD88Q99836 296 aa20.63■□□□□ 0.89
COX6A1-203ENST00000550009 ATP6V0A2Q9Y487 856 aa20.63■□□□□ 0.89
COX6A1-203ENST00000550009 MYH3P11055 1940 aa20.63■□□□□ 0.89
COX6A1-203ENST00000550009 RIC3Q7Z5B4 369 aa20.62■□□□□ 0.89
COX6A1-203ENST00000550009 GJA3Q9Y6H8 435 aa20.62■□□□□ 0.89
COX6A1-203ENST00000550009 G2E3Q7L622 706 aa20.61■□□□□ 0.89
COX6A1-203ENST00000550009 LARGE2Q8N3Y3 721 aa20.61■□□□□ 0.89
COX6A1-203ENST00000550009 CELF1Q92879 486 aaKnown RBP20.61■□□□□ 0.89
COX6A1-203ENST00000550009 ANP32CO43423 234 aa20.6■□□□□ 0.89
COX6A1-203ENST00000550009 EAPPQ56P03 285 aaPredicted RBP20.6■□□□□ 0.89
COX6A1-203ENST00000550009 CHADLQ6NUI6 762 aa20.6■□□□□ 0.89
COX6A1-203ENST00000550009 KLRG1Q96E93 195 aa20.6■□□□□ 0.89
COX6A1-203ENST00000550009 CACNA1FO60840 1977 aa20.59■□□□□ 0.89
COX6A1-203ENST00000550009 PPIP5K2O43314 1243 aa20.59■□□□□ 0.89
COX6A1-203ENST00000550009 CALD1Q05682 793 aaKnown RBP20.59■□□□□ 0.89
COX6A1-203ENST00000550009 GRAPQ13588 217 aa20.59■□□□□ 0.89
COX6A1-203ENST00000550009 CC2D2BQ6DHV5 1058 aa20.59■□□□□ 0.89
COX6A1-203ENST00000550009 GRAPLQ8TC17 118 aaPredicted RBP20.59■□□□□ 0.89
COX6A1-203ENST00000550009 SPINK5Q9NQ38 1064 aaPredicted RBP20.59■□□□□ 0.89
COX6A1-203ENST00000550009 SCN9AQ15858 1988 aa20.59■□□□□ 0.89
COX6A1-203ENST00000550009 IRS4O14654 1257 aaPredicted RBP20.58■□□□□ 0.89
COX6A1-203ENST00000550009 DDX46Q7L014 1031 aaKnown RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms