RNA–Protein interactions for RNA: ENST00000549718.5

LINC00661-205, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-205ENST00000549718 XAGE3Q8WTP9 111 aa21.04■□□□□ 0.96
LINC00661-205ENST00000549718 RPGRQ92834 1020 aaKnown RBP21.04■□□□□ 0.96
LINC00661-205ENST00000549718 CHPF2Q9P2E5 772 aa21.04■□□□□ 0.96
LINC00661-205ENST00000549718 HOXB7P09629 217 aa21.03■□□□□ 0.96
LINC00661-205ENST00000549718 VEGFAP15692 232 aaPredicted RBP21.03■□□□□ 0.96
LINC00661-205ENST00000549718 FKBP4Q02790 459 aaKnown RBP eCLIP21.03■□□□□ 0.96
LINC00661-205ENST00000549718 HDGFL1Q5TGJ6 251 aa21.03■□□□□ 0.96
LINC00661-205ENST00000549718 DDX60Q8IY21 1712 aaKnown RBP21.03■□□□□ 0.96
LINC00661-205ENST00000549718 SCN4AP35499 1836 aa21.02■□□□□ 0.96
LINC00661-205ENST00000549718 MBIPQ9NS73 344 aa21.02■□□□□ 0.96
LINC00661-205ENST00000549718 HSP90AB3PQ58FF7 597 aa21.01■□□□□ 0.95
LINC00661-205ENST00000549718 RTKN2Q8IZC4 609 aa21.01■□□□□ 0.95
LINC00661-205ENST00000549718 SMC1BQ8NDV3 1235 aa21.01■□□□□ 0.95
LINC00661-205ENST00000549718 UTP14AQ9BVJ6 771 aaKnown RBP21.01■□□□□ 0.95
LINC00661-205ENST00000549718 ZNF277Q9NRM2 450 aaPredicted RBP21.01■□□□□ 0.95
LINC00661-205ENST00000549718 RNF123Q5XPI4 1314 aa21.01■□□□□ 0.95
LINC00661-205ENST00000549718 POTECB2RU33 542 aa21■□□□□ 0.95
LINC00661-205ENST00000549718 HOXA10P31260 410 aaPredicted RBP21■□□□□ 0.95
LINC00661-205ENST00000549718 C3orf67Q6ZVT6 689 aa21■□□□□ 0.95
LINC00661-205ENST00000549718 ZNF853P0CG23 659 aa20.99■□□□□ 0.95
LINC00661-205ENST00000549718 CCDC184Q52MB2 194 aa20.99■□□□□ 0.95
LINC00661-205ENST00000549718 DUSP27Q5VZP5 1158 aa20.99■□□□□ 0.95
LINC00661-205ENST00000549718 IFT57Q9NWB7 429 aa20.99■□□□□ 0.95
LINC00661-205ENST00000549718 TAF1P21675 1872 aa20.98■□□□□ 0.95
LINC00661-205ENST00000549718 DDNO94850 711 aaPredicted RBP20.98■□□□□ 0.95
LINC00661-205ENST00000549718 CALD1Q05682 793 aaKnown RBP20.98■□□□□ 0.95
LINC00661-205ENST00000549718 NLRP10Q86W26 655 aa20.98■□□□□ 0.95
LINC00661-205ENST00000549718 RBM17Q96I25 401 aaKnown RBP20.98■□□□□ 0.95
LINC00661-205ENST00000549718 CRAMP1Q96RY5 1269 aa20.98■□□□□ 0.95
LINC00661-205ENST00000549718 DBF4Q9UBU7 674 aaPredicted RBP20.98■□□□□ 0.95
LINC00661-205ENST00000549718 COL4A5P29400 1685 aa20.97■□□□□ 0.95
LINC00661-205ENST00000549718 GNAI1P63096 354 aa20.97■□□□□ 0.95
LINC00661-205ENST00000549718 TCIRG1Q13488 830 aa20.97■□□□□ 0.95
LINC00661-205ENST00000549718 NLRP3Q96P20 1036 aa20.97■□□□□ 0.95
LINC00661-205ENST00000549718 PPEF1O14829 653 aaPredicted RBP20.96■□□□□ 0.95
LINC00661-205ENST00000549718 IARSP41252 1262 aaKnown RBP20.96■□□□□ 0.95
LINC00661-205ENST00000549718 SLC10A5Q5PT55 438 aa20.96■□□□□ 0.95
LINC00661-205ENST00000549718 CC2D2BQ6DHV5 1058 aa20.96■□□□□ 0.95
LINC00661-205ENST00000549718 SLC51AQ86UW1 340 aa20.96■□□□□ 0.95
LINC00661-205ENST00000549718 SYNE4Q8N205 404 aa20.96■□□□□ 0.95
LINC00661-205ENST00000549718 PLBD2Q8NHP8 589 aa20.96■□□□□ 0.95
LINC00661-205ENST00000549718 PSMD1Q99460 953 aa20.96■□□□□ 0.95
LINC00661-205ENST00000549718 ZNF541Q9H0D2 1346 aa20.96■□□□□ 0.95
LINC00661-205ENST00000549718 LRRC37AA6NMS7 1700 aa20.95■□□□□ 0.94
LINC00661-205ENST00000549718 HTRA3P83110 453 aa20.94■□□□□ 0.94
LINC00661-205ENST00000549718 HYPKQ9NX55 129 aa20.94■□□□□ 0.94
LINC00661-205ENST00000549718 TRMT112Q9UI30 125 aaKnown RBP20.94■□□□□ 0.94
LINC00661-205ENST00000549718 SH3TC1Q8TE82 1336 aa20.94■□□□□ 0.94
LINC00661-205ENST00000549718 ZNF316A6NFI3 1004 aaPredicted RBP20.93■□□□□ 0.94
LINC00661-205ENST00000549718 TCERG1O14776 1098 aaKnown RBP20.93■□□□□ 0.94
LINC00661-205ENST00000549718 HCLS1P14317 486 aaPredicted RBP20.93■□□□□ 0.94
LINC00661-205ENST00000549718 ANKRD13DQ6ZTN6 518 aa20.93■□□□□ 0.94
LINC00661-205ENST00000549718 L3MBTL3Q96JM7 780 aaPredicted RBP20.93■□□□□ 0.94
LINC00661-205ENST00000549718 ABCC4O15439 1325 aa20.93■□□□□ 0.94
LINC00661-205ENST00000549718 GRIPAP1Q4V328 841 aa20.92■□□□□ 0.94
LINC00661-205ENST00000549718 DNAJC5GQ8N7S2 189 aa20.92■□□□□ 0.94
LINC00661-205ENST00000549718 ZNF428Q96B54 188 aa20.92■□□□□ 0.94
LINC00661-205ENST00000549718 ADAMTSL1Q8N6G6 1762 aa20.92■□□□□ 0.94
LINC00661-205ENST00000549718 IQCA1LA6NCM1 817 aa20.91■□□□□ 0.94
LINC00661-205ENST00000549718 ELL2O00472 640 aaPredicted RBP20.91■□□□□ 0.94
LINC00661-205ENST00000549718 FZD9O00144 591 aa20.9■□□□□ 0.94
LINC00661-205ENST00000549718 JDP2Q8WYK2 163 aa20.9■□□□□ 0.94
LINC00661-205ENST00000549718 ISCA1Q9BUE6 129 aa20.9■□□□□ 0.94
LINC00661-205ENST00000549718 ATP5J2-PTCD1G3V325 749 aa20.89■□□□□ 0.93
LINC00661-205ENST00000549718 POTEIP0CG38 1075 aa20.89■□□□□ 0.93
LINC00661-205ENST00000549718 POTEJP0CG39 1038 aa20.89■□□□□ 0.93
LINC00661-205ENST00000549718 C8orf58Q8NAV2 365 aa20.89■□□□□ 0.93
LINC00661-205ENST00000549718 MRS2Q9HD23 443 aa20.89■□□□□ 0.93
LINC00661-205ENST00000549718 ATP6V0A2Q9Y487 856 aa20.89■□□□□ 0.93
LINC00661-205ENST00000549718 LTBP1Q14766 1721 aa20.88■□□□□ 0.93
LINC00661-205ENST00000549718 ANP32CO43423 234 aa20.88■□□□□ 0.93
LINC00661-205ENST00000549718 GOLGA2Q08379 1002 aa20.88■□□□□ 0.93
LINC00661-205ENST00000549718 TMX4Q9H1E5 349 aaPredicted RBP20.88■□□□□ 0.93
LINC00661-205ENST00000549718 PHAXQ9H814 394 aaKnown RBP20.88■□□□□ 0.93
LINC00661-205ENST00000549718 DUOX1Q9NRD9 1551 aa20.88■□□□□ 0.93
LINC00661-205ENST00000549718 COL4A1P02462 1669 aa20.87■□□□□ 0.93
LINC00661-205ENST00000549718 CCDC27Q2M243 656 aa20.87■□□□□ 0.93
LINC00661-205ENST00000549718 CHADLQ6NUI6 762 aa20.87■□□□□ 0.93
LINC00661-205ENST00000549718 DDX46Q7L014 1031 aaKnown RBP20.87■□□□□ 0.93
LINC00661-205ENST00000549718 LARGE2Q8N3Y3 721 aa20.87■□□□□ 0.93
LINC00661-205ENST00000549718 KLRG1Q96E93 195 aa20.87■□□□□ 0.93
LINC00661-205ENST00000549718 TAF1DQ9H5J8 278 aaPredicted RBP20.87■□□□□ 0.93
LINC00661-205ENST00000549718 GRAPQ13588 217 aa20.86■□□□□ 0.93
LINC00661-205ENST00000549718 RIC3Q7Z5B4 369 aa20.86■□□□□ 0.93
LINC00661-205ENST00000549718 GPC2Q8N158 579 aa20.86■□□□□ 0.93
LINC00661-205ENST00000549718 GRAPLQ8TC17 118 aaPredicted RBP20.86■□□□□ 0.93
LINC00661-205ENST00000549718 TSR2Q969E8 191 aaKnown RBP20.86■□□□□ 0.93
LINC00661-205ENST00000549718 FAM89AQ96GI7 184 aa20.86■□□□□ 0.93
LINC00661-205ENST00000549718 HACL1Q9UJ83 578 aa20.86■□□□□ 0.93
LINC00661-205ENST00000549718 BBOX1O75936 387 aa20.85■□□□□ 0.93
LINC00661-205ENST00000549718 EIF6P56537 245 aaKnown RBP20.85■□□□□ 0.93
LINC00661-205ENST00000549718 WWC1Q8IX03 1113 aa20.85■□□□□ 0.93
LINC00661-205ENST00000549718 TSPYL6Q8N831 410 aa20.85■□□□□ 0.93
LINC00661-205ENST00000549718 MYH3P11055 1940 aa20.84■□□□□ 0.93
LINC00661-205ENST00000549718 PPIP5K2O43314 1243 aa20.84■□□□□ 0.93
LINC00661-205ENST00000549718 TRIM28Q13263 835 aaKnown RBP20.84■□□□□ 0.93
LINC00661-205ENST00000549718 AOC3Q16853 763 aa20.84■□□□□ 0.93
LINC00661-205ENST00000549718 RTL5Q5HYW3 569 aaPredicted RBP20.84■□□□□ 0.93
LINC00661-205ENST00000549718 CCDC30Q5VVM6 783 aa20.84■□□□□ 0.93
LINC00661-205ENST00000549718 LDHDQ86WU2 507 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms