RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 U2AF1Q01081 240 aaKnown RBP eCLIP20.6■□□□□ 0.89
TCHP-208ENST00000549550 CRY2Q49AN0 593 aa20.6■□□□□ 0.89
TCHP-208ENST00000549550 GJA3Q9Y6H8 435 aa20.6■□□□□ 0.89
TCHP-208ENST00000549550 MAP2K1Q02750 393 aaPredicted RBP20.59■□□□□ 0.89
TCHP-208ENST00000549550 NUTM1Q86Y26 1132 aa20.59■□□□□ 0.89
TCHP-208ENST00000549550 NYXQ9GZU5 481 aa20.59■□□□□ 0.89
TCHP-208ENST00000549550 DDX21Q9NR30 783 aaKnown RBP eCLIP20.59■□□□□ 0.89
TCHP-208ENST00000549550 EIF6P56537 245 aaKnown RBP20.58■□□□□ 0.89
TCHP-208ENST00000549550 HTATSF1O43719 755 aaKnown RBP20.57■□□□□ 0.88
TCHP-208ENST00000549550 LMOD1P29536 600 aaPredicted RBP20.57■□□□□ 0.88
TCHP-208ENST00000549550 TAF7Q15545 349 aaPredicted RBP20.57■□□□□ 0.88
TCHP-208ENST00000549550 CC2D2BQ6DHV5 1058 aa20.57■□□□□ 0.88
TCHP-208ENST00000549550 NGEFQ8N5V2 710 aa20.57■□□□□ 0.88
TCHP-208ENST00000549550 ABHD8Q96I13 439 aa20.57■□□□□ 0.88
TCHP-208ENST00000549550 MIS18AQ9NYP9 233 aa20.57■□□□□ 0.88
TCHP-208ENST00000549550 RPGRQ92834 1020 aaKnown RBP20.56■□□□□ 0.88
TCHP-208ENST00000549550 RIC1Q4ADV7 1423 aa20.55■□□□□ 0.88
TCHP-208ENST00000549550 EPS15P42566 896 aa20.55■□□□□ 0.88
TCHP-208ENST00000549550 SCNN1DP51172 638 aa20.55■□□□□ 0.88
TCHP-208ENST00000549550 FMR1Q06787 632 aaKnown RBP eCLIP20.55■□□□□ 0.88
TCHP-208ENST00000549550 MAP3K15Q6ZN16 1313 aa20.54■□□□□ 0.88
TCHP-208ENST00000549550 ERVV-1B6SEH8 477 aa20.54■□□□□ 0.88
TCHP-208ENST00000549550 HOXA10P31260 410 aaPredicted RBP20.54■□□□□ 0.88
TCHP-208ENST00000549550 SLC51AQ86UW1 340 aa20.54■□□□□ 0.88
TCHP-208ENST00000549550 LARGE2Q8N3Y3 721 aa20.54■□□□□ 0.88
TCHP-208ENST00000549550 GPTP24298 496 aa20.53■□□□□ 0.88
TCHP-208ENST00000549550 PPP2R1AP30153 589 aa20.53■□□□□ 0.88
TCHP-208ENST00000549550 KIF6Q6ZMV9 814 aa20.53■□□□□ 0.88
TCHP-208ENST00000549550 PAXIP1Q6ZW49 1069 aaPredicted RBP20.53■□□□□ 0.88
TCHP-208ENST00000549550 CAPNS2Q96L46 248 aa20.53■□□□□ 0.88
TCHP-208ENST00000549550 IBTKQ9P2D0 1353 aaPredicted RBP20.53■□□□□ 0.88
TCHP-208ENST00000549550 UBN2Q6ZU65 1347 aa20.53■□□□□ 0.88
TCHP-208ENST00000549550 GRM1Q13255 1194 aa20.52■□□□□ 0.88
TCHP-208ENST00000549550 GRIPAP1Q4V328 841 aa20.52■□□□□ 0.88
TCHP-208ENST00000549550 TTLL7Q6ZT98 887 aa20.52■□□□□ 0.88
TCHP-208ENST00000549550 RRP7AQ9Y3A4 280 aaKnown RBP20.52■□□□□ 0.88
TCHP-208ENST00000549550 TRAF5O00463 557 aa20.51■□□□□ 0.87
TCHP-208ENST00000549550 TCERG1O14776 1098 aaKnown RBP20.51■□□□□ 0.87
TCHP-208ENST00000549550 PPEF1O14829 653 aaPredicted RBP20.51■□□□□ 0.87
TCHP-208ENST00000549550 ECE1P42892 770 aa20.51■□□□□ 0.87
TCHP-208ENST00000549550 FAM161AQ3B820 660 aa20.51■□□□□ 0.87
TCHP-208ENST00000549550 CYP4F22Q6NT55 531 aa20.51■□□□□ 0.87
TCHP-208ENST00000549550 USP50Q70EL3 339 aaPredicted RBP20.51■□□□□ 0.87
TCHP-208ENST00000549550 CRAMP1Q96RY5 1269 aa20.51■□□□□ 0.87
TCHP-208ENST00000549550 ZBTB3Q9H5J0 574 aa20.51■□□□□ 0.87
TCHP-208ENST00000549550 LAMB2P55268 1798 aa20.51■□□□□ 0.87
TCHP-208ENST00000549550 MYL6BP14649 208 aa20.5■□□□□ 0.87
TCHP-208ENST00000549550 SUSD4Q5VX71 490 aa20.5■□□□□ 0.87
TCHP-208ENST00000549550 CST9Q5W186 159 aa20.5■□□□□ 0.87
TCHP-208ENST00000549550 NIM1KQ8IY84 436 aa20.5■□□□□ 0.87
TCHP-208ENST00000549550 RBM17Q96I25 401 aaKnown RBP20.5■□□□□ 0.87
TCHP-208ENST00000549550 GPR101Q96P66 508 aaPredicted RBP20.5■□□□□ 0.87
TCHP-208ENST00000549550 BEGAINQ9BUH8 593 aa20.5■□□□□ 0.87
TCHP-208ENST00000549550 PPIP5K2O43314 1243 aa20.48■□□□□ 0.87
TCHP-208ENST00000549550 NTSR2O95665 410 aa20.48■□□□□ 0.87
TCHP-208ENST00000549550 C3orf67Q6ZVT6 689 aa20.48■□□□□ 0.87
TCHP-208ENST00000549550 PNISRQ8TF01 805 aaKnown RBP20.48■□□□□ 0.87
TCHP-208ENST00000549550 TLL2Q9Y6L7 1015 aa20.48■□□□□ 0.87
TCHP-208ENST00000549550 ANKRD36CQ5JPF3 1778 aa20.48■□□□□ 0.87
TCHP-208ENST00000549550 CASP8AP2Q9UKL3 1982 aa20.47■□□□□ 0.87
TCHP-208ENST00000549550 EIF4A1P60842 406 aaKnown RBP20.47■□□□□ 0.87
TCHP-208ENST00000549550 DDX10Q13206 875 aaKnown RBP20.47■□□□□ 0.87
TCHP-208ENST00000549550 AOC3Q16853 763 aa20.47■□□□□ 0.87
TCHP-208ENST00000549550 ZNF34Q8IZ26 560 aa20.47■□□□□ 0.87
TCHP-208ENST00000549550 GPRC5DQ9NZD1 345 aa20.47■□□□□ 0.87
TCHP-208ENST00000549550 ADARB2Q9NS39 739 aaKnown RBP20.46■□□□□ 0.87
TCHP-208ENST00000549550 TSKSQ9UJT2 592 aa20.46■□□□□ 0.87
TCHP-208ENST00000549550 CCDC85CA6NKD9 419 aa20.45■□□□□ 0.86
TCHP-208ENST00000549550 AOC2O75106 756 aa20.45■□□□□ 0.86
TCHP-208ENST00000549550 SLC34A2O95436 690 aa20.45■□□□□ 0.86
TCHP-208ENST00000549550 GIGYF2Q6Y7W6 1299 aaKnown RBP20.45■□□□□ 0.86
TCHP-208ENST00000549550 TAF1P21675 1872 aa20.44■□□□□ 0.86
TCHP-208ENST00000549550 NEFMP07197 916 aa20.44■□□□□ 0.86
TCHP-208ENST00000549550 PPP1R42Q7Z4L9 355 aa20.44■□□□□ 0.86
TCHP-208ENST00000549550 TMX4Q9H1E5 349 aaPredicted RBP20.44■□□□□ 0.86
TCHP-208ENST00000549550 ATP6V0A2Q9Y487 856 aa20.44■□□□□ 0.86
TCHP-208ENST00000549550 MAP2K2P36507 400 aa20.43■□□□□ 0.86
TCHP-208ENST00000549550 CXCL9Q07325 125 aa20.43■□□□□ 0.86
TCHP-208ENST00000549550 NLRP3Q96P20 1036 aa20.43■□□□□ 0.86
TCHP-208ENST00000549550 THUMPD2Q9BTF0 503 aaKnown RBP20.43■□□□□ 0.86
TCHP-208ENST00000549550 VPS33BQ9H267 617 aa20.43■□□□□ 0.86
TCHP-208ENST00000549550 CELF2O95319 508 aaKnown RBP20.42■□□□□ 0.86
TCHP-208ENST00000549550 SAPCD2Q86UD0 394 aa20.42■□□□□ 0.86
TCHP-208ENST00000549550 ZNRF3Q9ULT6 936 aa20.42■□□□□ 0.86
TCHP-208ENST00000549550 ABCC4O15439 1325 aa20.42■□□□□ 0.86
TCHP-208ENST00000549550 TNRC18O15417 2968 aaPredicted RBP20.41■□□□□ 0.86
TCHP-208ENST00000549550 GMPSP49915 693 aaPredicted RBP20.41■□□□□ 0.86
TCHP-208ENST00000549550 MLLT1Q03111 559 aaPredicted RBP20.41■□□□□ 0.86
TCHP-208ENST00000549550 PARP10Q53GL7 1025 aa20.41■□□□□ 0.86
TCHP-208ENST00000549550 SUPT20HQ8NEM7 779 aa20.41■□□□□ 0.86
TCHP-208ENST00000549550 GLIS2Q9BZE0 524 aaPredicted RBP20.41■□□□□ 0.86
TCHP-208ENST00000549550 ERBB4Q15303 1308 aa20.41■□□□□ 0.86
TCHP-208ENST00000549550 RTFDC1Q9BY42 306 aaPredicted RBP20.4■□□□□ 0.86
TCHP-208ENST00000549550 RGS19P49795 217 aa20.39■□□□□ 0.85
TCHP-208ENST00000549550 NFE2L2Q16236 605 aa20.39■□□□□ 0.85
TCHP-208ENST00000549550 SLC10A5Q5PT55 438 aa20.39■□□□□ 0.85
TCHP-208ENST00000549550 PLEKHF1Q96S99 279 aa20.39■□□□□ 0.85
TCHP-208ENST00000549550 UTP14AQ9BVJ6 771 aaKnown RBP20.39■□□□□ 0.85
TCHP-208ENST00000549550 POLR2AP24928 1970 aaKnown RBP20.39■□□□□ 0.85
TCHP-208ENST00000549550 CDHR2Q9BYE9 1310 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms