RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 CCDC24Q8N4L8 307 aa22.58■■□□□ 1.21
RAPGEF3-220ENST00000549347 MYD88Q99836 296 aa22.58■■□□□ 1.21
RAPGEF3-220ENST00000549347 UTP14AQ9BVJ6 771 aaKnown RBP22.58■■□□□ 1.21
RAPGEF3-220ENST00000549347 PDZRN3Q9UPQ7 1066 aa22.58■■□□□ 1.21
RAPGEF3-220ENST00000549347 A0A0G2JLW4 131 aa22.57■■□□□ 1.2
RAPGEF3-220ENST00000549347 KCNA3P22001 575 aa22.57■■□□□ 1.2
RAPGEF3-220ENST00000549347 PDE6BP35913 854 aa22.57■■□□□ 1.2
RAPGEF3-220ENST00000549347 GTF2E1P29083 439 aaPredicted RBP22.56■■□□□ 1.2
RAPGEF3-220ENST00000549347 CHRNA5P30532 468 aa22.56■■□□□ 1.2
RAPGEF3-220ENST00000549347 ERFEQ4G0M1 354 aa22.56■■□□□ 1.2
RAPGEF3-220ENST00000549347 DNAAF4Q8WXU2 420 aa22.56■■□□□ 1.2
RAPGEF3-220ENST00000549347 BCL2L13Q9BXK5 485 aa22.56■■□□□ 1.2
RAPGEF3-220ENST00000549347 SMC4Q9NTJ3 1288 aa22.56■■□□□ 1.2
RAPGEF3-220ENST00000549347 CACNA1SQ13698 1873 aa22.56■■□□□ 1.2
RAPGEF3-220ENST00000549347 PTPRCP08575 1304 aa22.56■■□□□ 1.2
RAPGEF3-220ENST00000549347 KLRG2A4D1S0 409 aaPredicted RBP22.55■■□□□ 1.2
RAPGEF3-220ENST00000549347 RARSP54136 660 aaKnown RBP22.55■■□□□ 1.2
RAPGEF3-220ENST00000549347 BRPF1P55201 1214 aaPredicted RBP22.55■■□□□ 1.2
RAPGEF3-220ENST00000549347 NEXNQ0ZGT2 675 aa22.55■■□□□ 1.2
RAPGEF3-220ENST00000549347 CCDC191Q8NCU4 936 aa22.55■■□□□ 1.2
RAPGEF3-220ENST00000549347 SH3TC1Q8TE82 1336 aa22.55■■□□□ 1.2
RAPGEF3-220ENST00000549347 IGKV5-2P06315 115 aa22.54■■□□□ 1.2
RAPGEF3-220ENST00000549347 C2CD5Q86YS7 1000 aa22.54■■□□□ 1.2
RAPGEF3-220ENST00000549347 TRMT112Q9UI30 125 aaKnown RBP22.54■■□□□ 1.2
RAPGEF3-220ENST00000549347 H0YIN7 160 aa22.53■■□□□ 1.2
RAPGEF3-220ENST00000549347 CWC25Q9NXE8 425 aaPredicted RBP22.53■■□□□ 1.2
RAPGEF3-220ENST00000549347 F6X3S4 739 aa22.52■■□□□ 1.2
RAPGEF3-220ENST00000549347 SRGNP10124 158 aa22.52■■□□□ 1.2
RAPGEF3-220ENST00000549347 SLC10A5Q5PT55 438 aa22.52■■□□□ 1.2
RAPGEF3-220ENST00000549347 PIM2Q9P1W9 311 aa22.52■■□□□ 1.2
RAPGEF3-220ENST00000549347 NEURL1BA8MQ27 555 aa22.51■■□□□ 1.19
RAPGEF3-220ENST00000549347 YBX3P16989 372 aaKnown RBP eCLIP22.51■■□□□ 1.19
RAPGEF3-220ENST00000549347 CRY2Q49AN0 593 aa22.51■■□□□ 1.19
RAPGEF3-220ENST00000549347 ZBTB38Q8NAP3 1195 aaPredicted RBP22.51■■□□□ 1.19
RAPGEF3-220ENST00000549347 LINS1Q8NG48 757 aa22.51■■□□□ 1.19
RAPGEF3-220ENST00000549347 CWF19L2Q2TBE0 894 aaKnown RBP22.5■■□□□ 1.19
RAPGEF3-220ENST00000549347 STYK1Q6J9G0 422 aa22.5■■□□□ 1.19
RAPGEF3-220ENST00000549347 GOLGB1Q14789 3259 aaKnown RBP22.5■■□□□ 1.19
RAPGEF3-220ENST00000549347 KIF16BQ96L93 1317 aa22.5■■□□□ 1.19
RAPGEF3-220ENST00000549347 MYH3P11055 1940 aa22.49■■□□□ 1.19
RAPGEF3-220ENST00000549347 PCCAP05165 728 aaPredicted RBP22.49■■□□□ 1.19
RAPGEF3-220ENST00000549347 GPR162Q16538 588 aa22.49■■□□□ 1.19
RAPGEF3-220ENST00000549347 BEND3Q5T5X7 828 aa22.49■■□□□ 1.19
RAPGEF3-220ENST00000549347 SYNE4Q8N205 404 aa22.49■■□□□ 1.19
RAPGEF3-220ENST00000549347 FAM89AQ96GI7 184 aa22.49■■□□□ 1.19
RAPGEF3-220ENST00000549347 MASTLQ96GX5 879 aa22.49■■□□□ 1.19
RAPGEF3-220ENST00000549347 WWC3Q9ULE0 1092 aa22.49■■□□□ 1.19
RAPGEF3-220ENST00000549347 DCAF8L1A6NGE4 600 aa22.48■■□□□ 1.19
RAPGEF3-220ENST00000549347 PELP1Q8IZL8 1130 aaKnown RBP22.48■■□□□ 1.19
RAPGEF3-220ENST00000549347 SLX4Q8IY92 1834 aa22.47■■□□□ 1.19
RAPGEF3-220ENST00000549347 NPR1P16066 1061 aa22.47■■□□□ 1.19
RAPGEF3-220ENST00000549347 DALRD3Q5D0E6 543 aaKnown RBP22.47■■□□□ 1.19
RAPGEF3-220ENST00000549347 C3orf67Q6ZVT6 689 aa22.47■■□□□ 1.19
RAPGEF3-220ENST00000549347 NLRP3Q96P20 1036 aa22.47■■□□□ 1.19
RAPGEF3-220ENST00000549347 BCS1LQ9Y276 419 aa22.47■■□□□ 1.19
RAPGEF3-220ENST00000549347 CDHR2Q9BYE9 1310 aa22.47■■□□□ 1.19
RAPGEF3-220ENST00000549347 HCLS1P14317 486 aaPredicted RBP22.46■■□□□ 1.19
RAPGEF3-220ENST00000549347 GCKRQ14397 625 aa22.46■■□□□ 1.19
RAPGEF3-220ENST00000549347 TTLL6Q8N841 843 aa22.46■■□□□ 1.19
RAPGEF3-220ENST00000549347 CNKSR1Q969H4 720 aa22.46■■□□□ 1.19
RAPGEF3-220ENST00000549347 ZNF622Q969S3 477 aaKnown RBP eCLIP22.46■■□□□ 1.19
RAPGEF3-220ENST00000549347 IRS4O14654 1257 aaPredicted RBP22.45■■□□□ 1.18
RAPGEF3-220ENST00000549347 NOB1Q9ULX3 412 aaKnown RBP22.45■■□□□ 1.18
RAPGEF3-220ENST00000549347 GRIN3BO60391 1043 aa22.44■■□□□ 1.18
RAPGEF3-220ENST00000549347 ALDH1L1O75891 902 aa22.44■■□□□ 1.18
RAPGEF3-220ENST00000549347 HSP90B1P14625 803 aaKnown RBP22.44■■□□□ 1.18
RAPGEF3-220ENST00000549347 HOXA10P31260 410 aaPredicted RBP22.44■■□□□ 1.18
RAPGEF3-220ENST00000549347 CHD4Q14839 1912 aa22.44■■□□□ 1.18
RAPGEF3-220ENST00000549347 RTL5Q5HYW3 569 aaPredicted RBP22.44■■□□□ 1.18
RAPGEF3-220ENST00000549347 SLC4A10Q6U841 1118 aa22.44■■□□□ 1.18
RAPGEF3-220ENST00000549347 ARHGAP45Q92619 1136 aa22.44■■□□□ 1.18
RAPGEF3-220ENST00000549347 H7C1W4 665 aa22.43■■□□□ 1.18
RAPGEF3-220ENST00000549347 BCAR3O75815 825 aa22.43■■□□□ 1.18
RAPGEF3-220ENST00000549347 RPGRQ92834 1020 aaKnown RBP22.43■■□□□ 1.18
RAPGEF3-220ENST00000549347 YTHDC1Q96MU7 727 aaKnown RBP22.43■■□□□ 1.18
RAPGEF3-220ENST00000549347 API5Q9BZZ5 524 aaKnown RBP22.43■■□□□ 1.18
RAPGEF3-220ENST00000549347 SRCIN1Q9C0H9 1055 aa22.43■■□□□ 1.18
RAPGEF3-220ENST00000549347 CASP7P55210 303 aa22.42■■□□□ 1.18
RAPGEF3-220ENST00000549347 PRPF40BQ6NWY9 871 aaKnown RBP22.42■■□□□ 1.18
RAPGEF3-220ENST00000549347 FER1L6Q2WGJ9 1857 aa22.41■■□□□ 1.18
RAPGEF3-220ENST00000549347 SF3B3Q15393 1217 aaKnown RBP22.41■■□□□ 1.18
RAPGEF3-220ENST00000549347 UBE3BQ7Z3V4 1068 aa22.41■■□□□ 1.18
RAPGEF3-220ENST00000549347 UTRNP46939 3433 aa22.4■■□□□ 1.18
RAPGEF3-220ENST00000549347 ABCC4O15439 1325 aa22.4■■□□□ 1.18
RAPGEF3-220ENST00000549347 PDE8AO60658 829 aa22.4■■□□□ 1.18
RAPGEF3-220ENST00000549347 ALDH1B1P30837 517 aa22.4■■□□□ 1.18
RAPGEF3-220ENST00000549347 JARID2Q92833 1246 aaPredicted RBP22.4■■□□□ 1.18
RAPGEF3-220ENST00000549347 RBM17Q96I25 401 aaKnown RBP22.4■■□□□ 1.18
RAPGEF3-220ENST00000549347 CRAMP1Q96RY5 1269 aa22.4■■□□□ 1.18
RAPGEF3-220ENST00000549347 TAF1P21675 1872 aa22.4■■□□□ 1.18
RAPGEF3-220ENST00000549347 LRRC37AA6NMS7 1700 aa22.4■■□□□ 1.18
RAPGEF3-220ENST00000549347 GRM8O00222 908 aa22.39■■□□□ 1.17
RAPGEF3-220ENST00000549347 PLA2G12BQ9BX93 195 aa22.39■■□□□ 1.17
RAPGEF3-220ENST00000549347 COL4A1P02462 1669 aa22.39■■□□□ 1.17
RAPGEF3-220ENST00000549347 IPO8O15397 1037 aaKnown RBP22.38■■□□□ 1.17
RAPGEF3-220ENST00000549347 UTYO14607 1347 aa22.37■■□□□ 1.17
RAPGEF3-220ENST00000549347 TRIM27P14373 513 aa22.37■■□□□ 1.17
RAPGEF3-220ENST00000549347 CTSWP56202 376 aa22.37■■□□□ 1.17
RAPGEF3-220ENST00000549347 ATF7IPQ6VMQ6 1270 aa22.37■■□□□ 1.17
RAPGEF3-220ENST00000549347 SNED1Q8TER0 1413 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms