RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 IBTKQ9P2D0 1353 aaPredicted RBP18.1■□□□□ 0.49
CDX2-202ENST00000548877 ERVV-1B6SEH8 477 aa18.1■□□□□ 0.49
CDX2-202ENST00000548877 USP50Q70EL3 339 aaPredicted RBP18.1■□□□□ 0.49
CDX2-202ENST00000548877 CAPNS2Q96L46 248 aa18.1■□□□□ 0.49
CDX2-202ENST00000548877 ABCC12Q96J65 1359 aa18.09■□□□□ 0.49
CDX2-202ENST00000548877 LMOD1P29536 600 aaPredicted RBP18.09■□□□□ 0.49
CDX2-202ENST00000548877 MCM10Q7L590 875 aa18.09■□□□□ 0.49
CDX2-202ENST00000548877 RTF1Q92541 710 aaKnown RBP18.09■□□□□ 0.49
CDX2-202ENST00000548877 FAM177BA6PVY3 158 aa18.08■□□□□ 0.48
CDX2-202ENST00000548877 GTF2E1P29083 439 aaPredicted RBP18.08■□□□□ 0.48
CDX2-202ENST00000548877 FAM161AQ3B820 660 aa18.08■□□□□ 0.48
CDX2-202ENST00000548877 CST9Q5W186 159 aa18.08■□□□□ 0.48
CDX2-202ENST00000548877 CFAP53Q96M91 514 aa18.08■□□□□ 0.48
CDX2-202ENST00000548877 MAP2K2P36507 400 aa18.07■□□□□ 0.48
CDX2-202ENST00000548877 EPS15P42566 896 aa18.07■□□□□ 0.48
CDX2-202ENST00000548877 TAF7Q15545 349 aaPredicted RBP18.07■□□□□ 0.48
CDX2-202ENST00000548877 GPR101Q96P66 508 aaPredicted RBP18.07■□□□□ 0.48
CDX2-202ENST00000548877 CRAMP1Q96RY5 1269 aa18.07■□□□□ 0.48
CDX2-202ENST00000548877 VPS33BQ9H267 617 aa18.07■□□□□ 0.48
CDX2-202ENST00000548877 NUDCQ9Y266 331 aa18.07■□□□□ 0.48
CDX2-202ENST00000548877 GJA3Q9Y6H8 435 aa18.07■□□□□ 0.48
CDX2-202ENST00000548877 TLL2Q9Y6L7 1015 aa18.07■□□□□ 0.48
CDX2-202ENST00000548877 MAP3K15Q6ZN16 1313 aa18.06■□□□□ 0.48
CDX2-202ENST00000548877 FMR1Q06787 632 aaKnown RBP eCLIP18.05■□□□□ 0.48
CDX2-202ENST00000548877 NUTM1Q86Y26 1132 aa18.05■□□□□ 0.48
CDX2-202ENST00000548877 LARGE2Q8N3Y3 721 aa18.05■□□□□ 0.48
CDX2-202ENST00000548877 HHIPL1Q96JK4 782 aa18.05■□□□□ 0.48
CDX2-202ENST00000548877 BEGAINQ9BUH8 593 aa18.05■□□□□ 0.48
CDX2-202ENST00000548877 KDM3BQ7LBC6 1761 aa18.04■□□□□ 0.48
CDX2-202ENST00000548877 MLLT1Q03111 559 aaPredicted RBP18.04■□□□□ 0.48
CDX2-202ENST00000548877 DCTN1Q14203 1278 aa18.04■□□□□ 0.48
CDX2-202ENST00000548877 CYP4F22Q6NT55 531 aa18.04■□□□□ 0.48
CDX2-202ENST00000548877 RPGRQ92834 1020 aaKnown RBP18.04■□□□□ 0.48
CDX2-202ENST00000548877 PGAP2Q9UHJ9 254 aa18.04■□□□□ 0.48
CDX2-202ENST00000548877 CA12O43570 354 aa18.03■□□□□ 0.48
CDX2-202ENST00000548877 RBM17Q96I25 401 aaKnown RBP18.03■□□□□ 0.48
CDX2-202ENST00000548877 ADARB2Q9NS39 739 aaKnown RBP18.03■□□□□ 0.48
CDX2-202ENST00000548877 GPRC5DQ9NZD1 345 aa18.03■□□□□ 0.48
CDX2-202ENST00000548877 UBN2Q6ZU65 1347 aa18.02■□□□□ 0.48
CDX2-202ENST00000548877 TRAF5O00463 557 aa18.02■□□□□ 0.48
CDX2-202ENST00000548877 U2AF1L5P0DN76 240 aaPredicted RBP18.02■□□□□ 0.48
CDX2-202ENST00000548877 U2AF1Q01081 240 aaKnown RBP eCLIP18.02■□□□□ 0.48
CDX2-202ENST00000548877 SAPCD2Q86UD0 394 aa18.02■□□□□ 0.48
CDX2-202ENST00000548877 NIM1KQ8IY84 436 aa18.02■□□□□ 0.48
CDX2-202ENST00000548877 ZNF34Q8IZ26 560 aa18.02■□□□□ 0.48
CDX2-202ENST00000548877 PNISRQ8TF01 805 aaKnown RBP18.02■□□□□ 0.48
CDX2-202ENST00000548877 PPEF1O14829 653 aaPredicted RBP18.01■□□□□ 0.47
CDX2-202ENST00000548877 SUSD4Q5VX71 490 aa18.01■□□□□ 0.47
CDX2-202ENST00000548877 TTLL7Q6ZT98 887 aa18.01■□□□□ 0.47
CDX2-202ENST00000548877 RTFDC1Q9BY42 306 aaPredicted RBP18.01■□□□□ 0.47
CDX2-202ENST00000548877 DLG5Q8TDM6 1919 aa18■□□□□ 0.47
CDX2-202ENST00000548877 CCDC85CA6NKD9 419 aa18■□□□□ 0.47
CDX2-202ENST00000548877 NTSR2O95665 410 aa18■□□□□ 0.47
CDX2-202ENST00000548877 SLC10A5Q5PT55 438 aa18■□□□□ 0.47
CDX2-202ENST00000548877 KIF6Q6ZMV9 814 aa18■□□□□ 0.47
CDX2-202ENST00000548877 CCER1Q8TC90 406 aaPredicted RBP18■□□□□ 0.47
CDX2-202ENST00000548877 ATP6V0A2Q9Y487 856 aa18■□□□□ 0.47
CDX2-202ENST00000548877 CDHR2Q9BYE9 1310 aa17.99■□□□□ 0.47
CDX2-202ENST00000548877 BRPF1P55201 1214 aaPredicted RBP17.99■□□□□ 0.47
CDX2-202ENST00000548877 EIF4A1P60842 406 aaKnown RBP17.99■□□□□ 0.47
CDX2-202ENST00000548877 GIGYF2Q6Y7W6 1299 aaKnown RBP17.99■□□□□ 0.47
CDX2-202ENST00000548877 PAXIP1Q6ZW49 1069 aaPredicted RBP17.99■□□□□ 0.47
CDX2-202ENST00000548877 ZC3H15Q8WU90 426 aaKnown RBP17.99■□□□□ 0.47
CDX2-202ENST00000548877 MIS18AQ9NYP9 233 aa17.99■□□□□ 0.47
CDX2-202ENST00000548877 PCDH10Q9P2E7 1040 aa17.99■□□□□ 0.47
CDX2-202ENST00000548877 ZNRF3Q9ULT6 936 aa17.99■□□□□ 0.47
CDX2-202ENST00000548877 CASP8AP2Q9UKL3 1982 aa17.99■□□□□ 0.47
CDX2-202ENST00000548877 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
CDX2-202ENST00000548877 PPIP5K2O43314 1243 aa17.98■□□□□ 0.47
CDX2-202ENST00000548877 AOC2O75106 756 aa17.98■□□□□ 0.47
CDX2-202ENST00000548877 PPP2R1AP30153 589 aa17.98■□□□□ 0.47
CDX2-202ENST00000548877 CXCL9Q07325 125 aa17.98■□□□□ 0.47
CDX2-202ENST00000548877 C3orf67Q6ZVT6 689 aa17.98■□□□□ 0.47
CDX2-202ENST00000548877 SLC51AQ86UW1 340 aa17.98■□□□□ 0.47
CDX2-202ENST00000548877 GPTP24298 496 aa17.97■□□□□ 0.47
CDX2-202ENST00000548877 CNGB1Q14028 1251 aaPredicted RBP17.97■□□□□ 0.47
CDX2-202ENST00000548877 PARP10Q53GL7 1025 aa17.97■□□□□ 0.47
CDX2-202ENST00000548877 PPP1R42Q7Z4L9 355 aa17.97■□□□□ 0.47
CDX2-202ENST00000548877 NGEFQ8N5V2 710 aa17.97■□□□□ 0.47
CDX2-202ENST00000548877 SUPT20HQ8NEM7 779 aa17.97■□□□□ 0.47
CDX2-202ENST00000548877 NLRP3Q96P20 1036 aa17.97■□□□□ 0.47
CDX2-202ENST00000548877 RRP7AQ9Y3A4 280 aaKnown RBP17.97■□□□□ 0.47
CDX2-202ENST00000548877 CELF2O95319 508 aaKnown RBP17.96■□□□□ 0.47
CDX2-202ENST00000548877 AOC3Q16853 763 aa17.96■□□□□ 0.47
CDX2-202ENST00000548877 MCOLN1Q9GZU1 580 aa17.96■□□□□ 0.47
CDX2-202ENST00000548877 ANKRD36CQ5JPF3 1778 aa17.96■□□□□ 0.47
CDX2-202ENST00000548877 GMPSP49915 693 aaPredicted RBP17.95■□□□□ 0.46
CDX2-202ENST00000548877 GRM1Q13255 1194 aa17.95■□□□□ 0.46
CDX2-202ENST00000548877 LRP10Q7Z4F1 713 aa17.95■□□□□ 0.46
CDX2-202ENST00000548877 TMX4Q9H1E5 349 aaPredicted RBP17.95■□□□□ 0.46
CDX2-202ENST00000548877 ZBTB3Q9H5J0 574 aa17.95■□□□□ 0.46
CDX2-202ENST00000548877 TNRC18O15417 2968 aaPredicted RBP17.94■□□□□ 0.46
CDX2-202ENST00000548877 BBOX1O75936 387 aa17.94■□□□□ 0.46
CDX2-202ENST00000548877 KIAA2012Q0VF49 1180 aa17.94■□□□□ 0.46
CDX2-202ENST00000548877 SP8Q8IXZ3 490 aa17.94■□□□□ 0.46
CDX2-202ENST00000548877 GLIS2Q9BZE0 524 aaPredicted RBP17.94■□□□□ 0.46
CDX2-202ENST00000548877 TSKSQ9UJT2 592 aa17.94■□□□□ 0.46
CDX2-202ENST00000548877 MYL6BP14649 208 aa17.93■□□□□ 0.46
CDX2-202ENST00000548877 HIRAP54198 1017 aaPredicted RBP17.93■□□□□ 0.46
CDX2-202ENST00000548877 CIAPIN1Q6FI81 312 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms