RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 HSP90AB3PQ58FF7 597 aa20.34■□□□□ 0.85
DDX54-205ENST00000548786 NLRP10Q86W26 655 aa20.34■□□□□ 0.85
DDX54-205ENST00000548786 CNKSR1Q969H4 720 aa20.34■□□□□ 0.85
DDX54-205ENST00000548786 IBTKQ9P2D0 1353 aaPredicted RBP20.34■□□□□ 0.85
DDX54-205ENST00000548786 EXOSC9Q06265 439 aaKnown RBP20.33■□□□□ 0.85
DDX54-205ENST00000548786 DIEXFQ68CQ4 756 aaKnown RBP20.33■□□□□ 0.85
DDX54-205ENST00000548786 C3orf67Q6ZVT6 689 aa20.33■□□□□ 0.85
DDX54-205ENST00000548786 RIC3Q7Z5B4 369 aa20.33■□□□□ 0.85
DDX54-205ENST00000548786 SYNE4Q8N205 404 aa20.33■□□□□ 0.85
DDX54-205ENST00000548786 RNF181Q9P0P0 153 aa20.33■□□□□ 0.85
DDX54-205ENST00000548786 STK31Q9BXU1 1019 aa20.32■□□□□ 0.84
DDX54-205ENST00000548786 TRMT112Q9UI30 125 aaKnown RBP20.32■□□□□ 0.84
DDX54-205ENST00000548786 KLRG2A4D1S0 409 aaPredicted RBP20.31■□□□□ 0.84
DDX54-205ENST00000548786 CCER2I3L3R5 266 aa20.31■□□□□ 0.84
DDX54-205ENST00000548786 HCLS1P14317 486 aaPredicted RBP20.31■□□□□ 0.84
DDX54-205ENST00000548786 RTL5Q5HYW3 569 aaPredicted RBP20.31■□□□□ 0.84
DDX54-205ENST00000548786 OLFM4Q6UX06 510 aa20.31■□□□□ 0.84
DDX54-205ENST00000548786 RPGRQ92834 1020 aaKnown RBP20.31■□□□□ 0.84
DDX54-205ENST00000548786 NFKBIEO00221 500 aa20.3■□□□□ 0.84
DDX54-205ENST00000548786 PRELPP51888 382 aa20.3■□□□□ 0.84
DDX54-205ENST00000548786 MYH16Q9H6N6 1097 aa20.3■□□□□ 0.84
DDX54-205ENST00000548786 G2E3Q7L622 706 aa20.29■□□□□ 0.84
DDX54-205ENST00000548786 MIER1Q8N108 512 aa20.29■□□□□ 0.84
DDX54-205ENST00000548786 MYD88Q99836 296 aa20.29■□□□□ 0.84
DDX54-205ENST00000548786 GPBP1L1Q9HC44 474 aaPredicted RBP20.29■□□□□ 0.84
DDX54-205ENST00000548786 SLC4A2P04920 1241 aa20.28■□□□□ 0.84
DDX54-205ENST00000548786 CRY2Q49AN0 593 aa20.28■□□□□ 0.84
DDX54-205ENST00000548786 SLC51AQ86UW1 340 aa20.28■□□□□ 0.84
DDX54-205ENST00000548786 ISCA1Q9BUE6 129 aa20.28■□□□□ 0.84
DDX54-205ENST00000548786 SBF1O95248 1867 aa20.28■□□□□ 0.84
DDX54-205ENST00000548786 RIC1Q4ADV7 1423 aa20.27■□□□□ 0.84
DDX54-205ENST00000548786 FAM89AQ96GI7 184 aa20.27■□□□□ 0.84
DDX54-205ENST00000548786 NLRP3Q96P20 1036 aa20.27■□□□□ 0.84
DDX54-205ENST00000548786 CHMP4AQ9BY43 222 aa20.27■□□□□ 0.84
DDX54-205ENST00000548786 MAP3K2Q9Y2U5 619 aa20.27■□□□□ 0.84
DDX54-205ENST00000548786 SH3TC1Q8TE82 1336 aa20.27■□□□□ 0.83
DDX54-205ENST00000548786 ZNF521Q96K83 1311 aa20.27■□□□□ 0.83
DDX54-205ENST00000548786 DDX58O95786 925 aaKnown RBP20.26■□□□□ 0.83
DDX54-205ENST00000548786 LMNB1P20700 586 aa20.26■□□□□ 0.83
DDX54-205ENST00000548786 ALDH1B1P30837 517 aa20.26■□□□□ 0.83
DDX54-205ENST00000548786 LAMB2P55268 1798 aa20.26■□□□□ 0.83
DDX54-205ENST00000548786 FER1L6Q2WGJ9 1857 aa20.25■□□□□ 0.83
DDX54-205ENST00000548786 CCDC88AQ3V6T2 1871 aa20.25■□□□□ 0.83
DDX54-205ENST00000548786 PI4KAP2A4QPH2 592 aa20.25■□□□□ 0.83
DDX54-205ENST00000548786 VAMP4O75379 141 aa20.25■□□□□ 0.83
DDX54-205ENST00000548786 PI4KAP1Q8N8J0 262 aa20.25■□□□□ 0.83
DDX54-205ENST00000548786 JARID2Q92833 1246 aaPredicted RBP20.25■□□□□ 0.83
DDX54-205ENST00000548786 RBM17Q96I25 401 aaKnown RBP20.25■□□□□ 0.83
DDX54-205ENST00000548786 TAOK3Q9H2K8 898 aa20.25■□□□□ 0.83
DDX54-205ENST00000548786 RNF123Q5XPI4 1314 aa20.25■□□□□ 0.83
DDX54-205ENST00000548786 CCDC93Q567U6 631 aa20.24■□□□□ 0.83
DDX54-205ENST00000548786 C7orf43Q8WVR3 580 aa20.24■□□□□ 0.83
DDX54-205ENST00000548786 TIAM2Q8IVF5 1701 aa20.24■□□□□ 0.83
DDX54-205ENST00000548786 SLC10A5Q5PT55 438 aa20.23■□□□□ 0.83
DDX54-205ENST00000548786 SOGA3Q5TF21 947 aa20.23■□□□□ 0.83
DDX54-205ENST00000548786 DDX60Q8IY21 1712 aaKnown RBP20.23■□□□□ 0.83
DDX54-205ENST00000548786 METTL22Q9BUU2 404 aaPredicted RBP20.23■□□□□ 0.83
DDX54-205ENST00000548786 PPEF1O14829 653 aaPredicted RBP20.22■□□□□ 0.83
DDX54-205ENST00000548786 HOXA10P31260 410 aaPredicted RBP20.22■□□□□ 0.83
DDX54-205ENST00000548786 FLIIQ13045 1269 aa20.22■□□□□ 0.83
DDX54-205ENST00000548786 KSR2Q6VAB6 950 aa20.22■□□□□ 0.83
DDX54-205ENST00000548786 ABCC4O15439 1325 aa20.22■□□□□ 0.83
DDX54-205ENST00000548786 FKBP5Q13451 457 aaPredicted RBP20.21■□□□□ 0.83
DDX54-205ENST00000548786 CDCA7LQ96GN5 454 aa20.21■□□□□ 0.83
DDX54-205ENST00000548786 IRS4O14654 1257 aaPredicted RBP20.2■□□□□ 0.82
DDX54-205ENST00000548786 CWF19L2Q2TBE0 894 aaKnown RBP20.2■□□□□ 0.82
DDX54-205ENST00000548786 CRAMP1Q96RY5 1269 aa20.2■□□□□ 0.82
DDX54-205ENST00000548786 NMRK2Q9NPI5 230 aa20.2■□□□□ 0.82
DDX54-205ENST00000548786 ZNF277Q9NRM2 450 aaPredicted RBP20.2■□□□□ 0.82
DDX54-205ENST00000548786 CWC25Q9NXE8 425 aaPredicted RBP20.2■□□□□ 0.82
DDX54-205ENST00000548786 TRIM28Q13263 835 aaKnown RBP20.19■□□□□ 0.82
DDX54-205ENST00000548786 TAF1P21675 1872 aa20.19■□□□□ 0.82
DDX54-205ENST00000548786 E9PSI1 815 aa20.18■□□□□ 0.82
DDX54-205ENST00000548786 IGKV5-2P06315 115 aa20.18■□□□□ 0.82
DDX54-205ENST00000548786 FKBP4Q02790 459 aaKnown RBP eCLIP20.18■□□□□ 0.82
DDX54-205ENST00000548786 NEXNQ0ZGT2 675 aa20.18■□□□□ 0.82
DDX54-205ENST00000548786 DDX46Q7L014 1031 aaKnown RBP20.18■□□□□ 0.82
DDX54-205ENST00000548786 ZBTB38Q8NAP3 1195 aaPredicted RBP20.18■□□□□ 0.82
DDX54-205ENST00000548786 CCDC191Q8NCU4 936 aa20.18■□□□□ 0.82
DDX54-205ENST00000548786 LTBP3Q9NS15 1303 aa20.18■□□□□ 0.82
DDX54-205ENST00000548786 RTKN2Q8IZC4 609 aa20.17■□□□□ 0.82
DDX54-205ENST00000548786 CCDC85AQ96PX6 553 aaPredicted RBP20.17■□□□□ 0.82
DDX54-205ENST00000548786 SLFN5Q08AF3 891 aa20.16■□□□□ 0.82
DDX54-205ENST00000548786 F6X3S4 739 aa20.15■□□□□ 0.82
DDX54-205ENST00000548786 PCCAP05165 728 aaPredicted RBP20.15■□□□□ 0.82
DDX54-205ENST00000548786 C1QTNF8P60827 252 aa20.15■□□□□ 0.82
DDX54-205ENST00000548786 DNAAF4Q8WXU2 420 aa20.15■□□□□ 0.82
DDX54-205ENST00000548786 KDM2BQ8NHM5 1336 aa20.15■□□□□ 0.82
DDX54-205ENST00000548786 COL4A1P02462 1669 aa20.15■□□□□ 0.82
DDX54-205ENST00000548786 DICER1Q9UPY3 1922 aaKnown RBP20.14■□□□□ 0.81
DDX54-205ENST00000548786 NEURL1BA8MQ27 555 aa20.14■□□□□ 0.81
DDX54-205ENST00000548786 KIF3CO14782 793 aa20.14■□□□□ 0.81
DDX54-205ENST00000548786 GRAPQ13588 217 aa20.14■□□□□ 0.81
DDX54-205ENST00000548786 GRAPLQ8TC17 118 aaPredicted RBP20.14■□□□□ 0.81
DDX54-205ENST00000548786 RRAGCQ9HB90 399 aa20.14■□□□□ 0.81
DDX54-205ENST00000548786 SNED1Q8TER0 1413 aa20.13■□□□□ 0.81
DDX54-205ENST00000548786 BCL2L13Q9BXK5 485 aa20.13■□□□□ 0.81
DDX54-205ENST00000548786 TMX4Q9H1E5 349 aaPredicted RBP20.13■□□□□ 0.81
DDX54-205ENST00000548786 ATP6V0A2Q9Y487 856 aa20.13■□□□□ 0.81
DDX54-205ENST00000548786 CACNA1FO60840 1977 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms