RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 AGLP35573 1532 aa27.39■■□□□ 1.98
NPAS3-206ENST00000548645 KCNJ4P48050 445 aa27.39■■□□□ 1.98
NPAS3-206ENST00000548645 CLSTN2Q9H4D0 955 aa27.39■■□□□ 1.98
NPAS3-206ENST00000548645 CREB3L3Q68CJ9 461 aa27.39■■□□□ 1.97
NPAS3-206ENST00000548645 CCDC112Q8NEF3 446 aa27.39■■□□□ 1.97
NPAS3-206ENST00000548645 NRBP1Q9UHY1 535 aa27.39■■□□□ 1.97
NPAS3-206ENST00000548645 FAM173BQ6P4H8 233 aa27.38■■□□□ 1.97
NPAS3-206ENST00000548645 EVI5LQ96CN4 794 aa27.38■■□□□ 1.97
NPAS3-206ENST00000548645 RBM8AQ9Y5S9 174 aaKnown RBP27.38■■□□□ 1.97
NPAS3-206ENST00000548645 PODXL2Q9NZ53 605 aa27.38■■□□□ 1.97
NPAS3-206ENST00000548645 CTNNA3Q9UI47 895 aa27.38■■□□□ 1.97
NPAS3-206ENST00000548645 ANKRD1Q15327 319 aa27.37■■□□□ 1.97
NPAS3-206ENST00000548645 DDX54Q8TDD1 881 aaKnown RBP27.37■■□□□ 1.97
NPAS3-206ENST00000548645 BEND3Q5T5X7 828 aa27.37■■□□□ 1.97
NPAS3-206ENST00000548645 DNAAF4Q8WXU2 420 aa27.37■■□□□ 1.97
NPAS3-206ENST00000548645 CHD2O14647 1828 aaKnown RBP27.36■■□□□ 1.97
NPAS3-206ENST00000548645 ADGRL3Q9HAR2 1447 aa27.36■■□□□ 1.97
NPAS3-206ENST00000548645 CAVIN2O95810 425 aa27.36■■□□□ 1.97
NPAS3-206ENST00000548645 ZNF165P49910 485 aa27.36■■□□□ 1.97
NPAS3-206ENST00000548645 TPD52L1Q16890 204 aaPredicted RBP27.36■■□□□ 1.97
NPAS3-206ENST00000548645 CLIP2Q9UDT6 1046 aa27.35■■□□□ 1.97
NPAS3-206ENST00000548645 HIP1O00291 1037 aa27.35■■□□□ 1.97
NPAS3-206ENST00000548645 IFIT2P09913 472 aaKnown RBP27.35■■□□□ 1.97
NPAS3-206ENST00000548645 LEO1Q8WVC0 666 aaPredicted RBP27.35■■□□□ 1.97
NPAS3-206ENST00000548645 MAP4K1Q92918 833 aa27.35■■□□□ 1.97
NPAS3-206ENST00000548645 CHMP4AQ9BY43 222 aa27.34■■□□□ 1.97
NPAS3-206ENST00000548645 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.34■■□□□ 1.97
NPAS3-206ENST00000548645 TFIP11Q9UBB9 837 aaKnown RBP27.34■■□□□ 1.97
NPAS3-206ENST00000548645 CDC25BP30305 580 aa27.34■■□□□ 1.97
NPAS3-206ENST00000548645 GABPB1Q06547 395 aaPredicted RBP27.34■■□□□ 1.97
NPAS3-206ENST00000548645 MTX1Q13505 466 aa27.34■■□□□ 1.97
NPAS3-206ENST00000548645 ERC1Q8IUD2 1116 aa27.33■■□□□ 1.97
NPAS3-206ENST00000548645 EIF2S2P20042 333 aaKnown RBP27.33■■□□□ 1.97
NPAS3-206ENST00000548645 RNF20Q5VTR2 975 aa27.33■■□□□ 1.97
NPAS3-206ENST00000548645 BLOC1S2Q6QNY1 142 aa27.33■■□□□ 1.97
NPAS3-206ENST00000548645 CACTINQ8WUQ7 758 aaKnown RBP27.33■■□□□ 1.97
NPAS3-206ENST00000548645 DDX41Q9UJV9 622 aaKnown RBP27.33■■□□□ 1.97
NPAS3-206ENST00000548645 PI4KAP2A4QPH2 592 aa27.32■■□□□ 1.96
NPAS3-206ENST00000548645 PI4KAP1Q8N8J0 262 aa27.32■■□□□ 1.96
NPAS3-206ENST00000548645 SLC27A2O14975 620 aa27.32■■□□□ 1.96
NPAS3-206ENST00000548645 BICD2Q8TD16 824 aa27.32■■□□□ 1.96
NPAS3-206ENST00000548645 PTPRUQ92729 1446 aa27.32■■□□□ 1.96
NPAS3-206ENST00000548645 DNAJC25Q9H1X3 360 aa27.31■■□□□ 1.96
NPAS3-206ENST00000548645 ALDH8A1Q9H2A2 487 aaPredicted RBP27.31■■□□□ 1.96
NPAS3-206ENST00000548645 TAF3Q5VWG9 929 aa27.31■■□□□ 1.96
NPAS3-206ENST00000548645 LARP1Q6PKG0 1096 aaKnown RBP27.31■■□□□ 1.96
NPAS3-206ENST00000548645 ZNF771Q7L3S4 317 aaPredicted RBP27.3■■□□□ 1.96
NPAS3-206ENST00000548645 NR1I2O75469 434 aa27.3■■□□□ 1.96
NPAS3-206ENST00000548645 CEP135Q66GS9 1140 aa27.3■■□□□ 1.96
NPAS3-206ENST00000548645 NEMFO60524 1076 aa27.3■■□□□ 1.96
NPAS3-206ENST00000548645 IGSF3O75054 1194 aa27.29■■□□□ 1.96
NPAS3-206ENST00000548645 PLPPR3Q6T4P5 718 aa27.29■■□□□ 1.96
NPAS3-206ENST00000548645 HOXB7P09629 217 aa27.29■■□□□ 1.96
NPAS3-206ENST00000548645 RPS6KB1P23443 525 aa27.28■■□□□ 1.96
NPAS3-206ENST00000548645 NMIQ13287 307 aaPredicted RBP27.28■■□□□ 1.96
NPAS3-206ENST00000548645 FAM227BQ96M60 508 aa27.28■■□□□ 1.96
NPAS3-206ENST00000548645 CHPF2Q9P2E5 772 aa27.28■■□□□ 1.96
NPAS3-206ENST00000548645 MORC2Q9Y6X9 1032 aaPredicted RBP27.28■■□□□ 1.96
NPAS3-206ENST00000548645 SNRKQ9NRH2 765 aa27.28■■□□□ 1.96
NPAS3-206ENST00000548645 GOLGA6L19H0YKK7 550 aa27.27■■□□□ 1.96
NPAS3-206ENST00000548645 CCDC144BQ3MJ40 725 aa27.27■■□□□ 1.96
NPAS3-206ENST00000548645 CCDC144CPQ8IYA2 1237 aa27.27■■□□□ 1.96
NPAS3-206ENST00000548645 ESF1Q9H501 851 aaKnown RBP27.27■■□□□ 1.96
NPAS3-206ENST00000548645 SARM1Q6SZW1 724 aa27.27■■□□□ 1.96
NPAS3-206ENST00000548645 AACSQ86V21 672 aa27.27■■□□□ 1.96
NPAS3-206ENST00000548645 PGBD1Q96JS3 809 aa27.27■■□□□ 1.96
NPAS3-206ENST00000548645 GIGYF1O75420 1035 aaPredicted RBP27.27■■□□□ 1.96
NPAS3-206ENST00000548645 NAA30Q147X3 362 aaPredicted RBP27.26■■□□□ 1.95
NPAS3-206ENST00000548645 LRRC8AQ8IWT6 810 aa27.26■■□□□ 1.95
NPAS3-206ENST00000548645 HDAC5Q9UQL6 1122 aa27.26■■□□□ 1.95
NPAS3-206ENST00000548645 NGDNQ8NEJ9 315 aaKnown RBP27.26■■□□□ 1.95
NPAS3-206ENST00000548645 ZNF592Q92610 1267 aa27.26■■□□□ 1.95
NPAS3-206ENST00000548645 EIF4A1P60842 406 aaKnown RBP27.25■■□□□ 1.95
NPAS3-206ENST00000548645 KIF18AQ8NI77 898 aa27.25■■□□□ 1.95
NPAS3-206ENST00000548645 HOXC9P31274 260 aa27.25■■□□□ 1.95
NPAS3-206ENST00000548645 RBM6P78332 1123 aaKnown RBP27.25■■□□□ 1.95
NPAS3-206ENST00000548645 TOB2Q14106 344 aaPredicted RBP27.25■■□□□ 1.95
NPAS3-206ENST00000548645 MRFAP1L1Q96HT8 127 aa27.25■■□□□ 1.95
NPAS3-206ENST00000548645 TCEANC2Q96MN5 208 aa27.25■■□□□ 1.95
NPAS3-206ENST00000548645 DNAJC5Q9H3Z4 198 aa27.24■■□□□ 1.95
NPAS3-206ENST00000548645 C9orf78Q9NZ63 289 aaPredicted RBP27.24■■□□□ 1.95
NPAS3-206ENST00000548645 HMG20BQ9P0W2 317 aa27.23■■□□□ 1.95
NPAS3-206ENST00000548645 ADAMTS13Q76LX8 1427 aa27.23■■□□□ 1.95
NPAS3-206ENST00000548645 ZNF397Q8NF99 534 aaPredicted RBP27.23■■□□□ 1.95
NPAS3-206ENST00000548645 TMEM2Q9UHN6 1383 aa27.23■■□□□ 1.95
NPAS3-206ENST00000548645 COL9A3Q14050 684 aaPredicted RBP27.23■■□□□ 1.95
NPAS3-206ENST00000548645 IQCB1Q15051 598 aa27.23■■□□□ 1.95
NPAS3-206ENST00000548645 PTPN14Q15678 1187 aa27.23■■□□□ 1.95
NPAS3-206ENST00000548645 PA2G4Q9UQ80 394 aaKnown RBP27.23■■□□□ 1.95
NPAS3-206ENST00000548645 STK3Q13188 491 aa27.22■■□□□ 1.95
NPAS3-206ENST00000548645 CFAP45Q9UL16 551 aa27.22■■□□□ 1.95
NPAS3-206ENST00000548645 NWD1Q149M9 1564 aa27.22■■□□□ 1.95
NPAS3-206ENST00000548645 ADCY9O60503 1353 aa27.22■■□□□ 1.95
NPAS3-206ENST00000548645 NPHP4O75161 1426 aaPredicted RBP27.22■■□□□ 1.95
NPAS3-206ENST00000548645 ALDH1L1O75891 902 aa27.21■■□□□ 1.95
NPAS3-206ENST00000548645 NLRP6P59044 892 aa27.21■■□□□ 1.95
NPAS3-206ENST00000548645 CTAGE5O15320 804 aa27.21■■□□□ 1.95
NPAS3-206ENST00000548645 ZSCAN16Q9H4T2 348 aaPredicted RBP27.21■■□□□ 1.95
NPAS3-206ENST00000548645 CEMIPQ8WUJ3 1361 aa27.21■■□□□ 1.95
NPAS3-206ENST00000548645 RESTQ13127 1097 aa27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms