RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 RPLP1P05386 114 aaKnown RBP6.99□□□□□ -1.29
PTCH1-216ENST00000548379 RBM25P49756 843 aaKnown RBP6.99□□□□□ -1.29
PTCH1-216ENST00000548379 KCNQ4P56696 695 aa6.99□□□□□ -1.29
PTCH1-216ENST00000548379 EHHADHQ08426 723 aa6.99□□□□□ -1.29
PTCH1-216ENST00000548379 XKR5Q6UX68 686 aa6.99□□□□□ -1.29
PTCH1-216ENST00000548379 PIK3R5Q8WYR1 880 aa6.99□□□□□ -1.29
PTCH1-216ENST00000548379 KCNMB2Q9Y691 235 aa6.99□□□□□ -1.29
PTCH1-216ENST00000548379 EFSO43281 561 aa6.98□□□□□ -1.29
PTCH1-216ENST00000548379 EGFRP00533 1210 aa6.98□□□□□ -1.29
PTCH1-216ENST00000548379 PLCB3Q01970 1234 aa6.98□□□□□ -1.29
PTCH1-216ENST00000548379 TAGLNQ01995 201 aaKnown RBP6.98□□□□□ -1.29
PTCH1-216ENST00000548379 TRIP4Q15650 581 aaPredicted RBP6.98□□□□□ -1.29
PTCH1-216ENST00000548379 PGBD3Q8N328 593 aa6.98□□□□□ -1.29
PTCH1-216ENST00000548379 GIPC2Q8TF65 315 aa6.98□□□□□ -1.29
PTCH1-216ENST00000548379 GAS2L1Q99501 681 aaPredicted RBP6.98□□□□□ -1.29
PTCH1-216ENST00000548379 RTCBQ9Y3I0 505 aaKnown RBP6.98□□□□□ -1.29
PTCH1-216ENST00000548379 FAM157BP0CG42 384 aa6.97□□□□□ -1.29
PTCH1-216ENST00000548379 PCSK2P16519 638 aa6.97□□□□□ -1.29
PTCH1-216ENST00000548379 EAPPQ56P03 285 aaPredicted RBP6.97□□□□□ -1.29
PTCH1-216ENST00000548379 ZCCHC2Q9C0B9 1178 aaKnown RBP6.97□□□□□ -1.29
PTCH1-216ENST00000548379 NEUROD4Q9HD90 331 aa6.97□□□□□ -1.29
PTCH1-216ENST00000548379 NDFIP2Q9NV92 336 aa6.97□□□□□ -1.29
PTCH1-216ENST00000548379 KIAA1522Q9P206 1035 aaPredicted RBP6.97□□□□□ -1.29
PTCH1-216ENST00000548379 GMPR2Q9P2T1 348 aaKnown RBP6.97□□□□□ -1.29
PTCH1-216ENST00000548379 EFHC2Q5JST6 749 aa6.96□□□□□ -1.3
PTCH1-216ENST00000548379 PDE12Q6L8Q7 609 aaKnown RBP6.96□□□□□ -1.3
PTCH1-216ENST00000548379 CCDC155Q8N6L0 562 aa6.96□□□□□ -1.3
PTCH1-216ENST00000548379 GMCL1Q96IK5 515 aa6.96□□□□□ -1.3
PTCH1-216ENST00000548379 NIF3L1Q9GZT8 377 aa6.96□□□□□ -1.3
PTCH1-216ENST00000548379 CUEDC1Q9NWM3 386 aaPredicted RBP6.96□□□□□ -1.3
PTCH1-216ENST00000548379 HCN2Q9UL51 889 aa6.96□□□□□ -1.3
PTCH1-216ENST00000548379 E9PSI1 815 aa6.95□□□□□ -1.3
PTCH1-216ENST00000548379 VAMP1P23763 118 aa6.95□□□□□ -1.3
PTCH1-216ENST00000548379 ENOX2Q16206 610 aaKnown RBP6.95□□□□□ -1.3
PTCH1-216ENST00000548379 DBN1Q16643 649 aa6.95□□□□□ -1.3
PTCH1-216ENST00000548379 ZNF326Q5BKZ1 582 aaKnown RBP6.95□□□□□ -1.3
PTCH1-216ENST00000548379 FIGNL1Q6PIW4 674 aa6.95□□□□□ -1.3
PTCH1-216ENST00000548379 TRIM22Q8IYM9 498 aa6.95□□□□□ -1.3
PTCH1-216ENST00000548379 TMC1Q8TDI8 760 aa6.95□□□□□ -1.3
PTCH1-216ENST00000548379 CEP63Q96MT8 703 aa6.95□□□□□ -1.3
PTCH1-216ENST00000548379 NUCKS1Q9H1E3 243 aaKnown RBP6.95□□□□□ -1.3
PTCH1-216ENST00000548379 BRD7Q9NPI1 651 aa6.95□□□□□ -1.3
PTCH1-216ENST00000548379 USP20Q9Y2K6 914 aa6.95□□□□□ -1.3
PTCH1-216ENST00000548379 PCDHGC4Q9Y5F7 938 aa6.95□□□□□ -1.3
PTCH1-216ENST00000548379 GJA3Q9Y6H8 435 aa6.95□□□□□ -1.3
PTCH1-216ENST00000548379 A6NHS1 94 aa6.94□□□□□ -1.3
PTCH1-216ENST00000548379 H7C1W4 665 aa6.94□□□□□ -1.3
PTCH1-216ENST00000548379 ATXN7O15265 892 aaPredicted RBP6.94□□□□□ -1.3
PTCH1-216ENST00000548379 SNRPBP14678 240 aaKnown RBP6.94□□□□□ -1.3
PTCH1-216ENST00000548379 EPB42P16452 691 aa6.94□□□□□ -1.3
PTCH1-216ENST00000548379 TNP2Q05952 138 aa6.94□□□□□ -1.3
PTCH1-216ENST00000548379 LAMC2Q13753 1193 aa6.94□□□□□ -1.3
PTCH1-216ENST00000548379 FNDC3AQ9Y2H6 1198 aaKnown RBP6.94□□□□□ -1.3
PTCH1-216ENST00000548379 ITGA6P23229 1130 aa6.93□□□□□ -1.3
PTCH1-216ENST00000548379 RIPOR1Q6ZS17 1223 aa6.93□□□□□ -1.3
PTCH1-216ENST00000548379 CMTR1Q8N1G2 835 aaKnown RBP6.93□□□□□ -1.3
PTCH1-216ENST00000548379 ZNF837Q96EG3 531 aaPredicted RBP6.93□□□□□ -1.3
PTCH1-216ENST00000548379 CSRNP1Q96S65 589 aa6.93□□□□□ -1.3
PTCH1-216ENST00000548379 CFHR5Q9BXR6 569 aa6.93□□□□□ -1.3
PTCH1-216ENST00000548379 DNAJC25Q9H1X3 360 aa6.93□□□□□ -1.3
PTCH1-216ENST00000548379 IGSF5Q9NSI5 407 aa6.93□□□□□ -1.3
PTCH1-216ENST00000548379 UBAP1LF5GYI3 381 aa6.92□□□□□ -1.3
PTCH1-216ENST00000548379 BNIP3LO60238 219 aa6.92□□□□□ -1.3
PTCH1-216ENST00000548379 PRPF40AO75400 957 aaKnown RBP6.92□□□□□ -1.3
PTCH1-216ENST00000548379 TNFRSF21O75509 655 aa6.92□□□□□ -1.3
PTCH1-216ENST00000548379 LDHBP07195 334 aaKnown RBP6.92□□□□□ -1.3
PTCH1-216ENST00000548379 NEFLP07196 543 aa6.92□□□□□ -1.3
PTCH1-216ENST00000548379 FGD1P98174 961 aa6.92□□□□□ -1.3
PTCH1-216ENST00000548379 SFSWAPQ12872 951 aaKnown RBP6.92□□□□□ -1.3
PTCH1-216ENST00000548379 ORC1Q13415 861 aa6.92□□□□□ -1.3
PTCH1-216ENST00000548379 C8orf34Q49A92 452 aa6.92□□□□□ -1.3
PTCH1-216ENST00000548379 MRRFQ96E11 262 aaKnown RBP6.92□□□□□ -1.3
PTCH1-216ENST00000548379 ELP3Q9H9T3 547 aa6.92□□□□□ -1.3
PTCH1-216ENST00000548379 KCNH4Q9UQ05 1017 aa6.92□□□□□ -1.3
PTCH1-216ENST00000548379 EIF1AYO14602 144 aaKnown RBP6.91□□□□□ -1.3
PTCH1-216ENST00000548379 XYLBO75191 536 aa6.91□□□□□ -1.3
PTCH1-216ENST00000548379 MAPTP10636 758 aaKnown RBP6.91□□□□□ -1.3
PTCH1-216ENST00000548379 MAPK8P45983 427 aa6.91□□□□□ -1.3
PTCH1-216ENST00000548379 FBF1Q8TES7 1133 aa6.91□□□□□ -1.3
PTCH1-216ENST00000548379 GSX2Q9BZM3 304 aa6.91□□□□□ -1.3
PTCH1-216ENST00000548379 STRN4Q9NRL3 753 aa6.91□□□□□ -1.3
PTCH1-216ENST00000548379 TMEM63CQ9P1W3 806 aa6.91□□□□□ -1.3
PTCH1-216ENST00000548379 WWC3Q9ULE0 1092 aa6.91□□□□□ -1.3
PTCH1-216ENST00000548379 PNMA6FA0A0J9YX94 578 aa6.9□□□□□ -1.3
PTCH1-216ENST00000548379 RANGAP1P46060 587 aaPredicted RBP6.9□□□□□ -1.3
PTCH1-216ENST00000548379 MRPL58Q14197 206 aaKnown RBP6.9□□□□□ -1.3
PTCH1-216ENST00000548379 ALG1LQ6GMV1 187 aa6.9□□□□□ -1.3
PTCH1-216ENST00000548379 NLRP13Q86W25 1043 aa6.9□□□□□ -1.3
PTCH1-216ENST00000548379 TTC16Q8NEE8 873 aa6.9□□□□□ -1.3
PTCH1-216ENST00000548379 SNX29Q8TEQ0 813 aa6.9□□□□□ -1.3
PTCH1-216ENST00000548379 NANOS1Q8WY41 292 aaKnown RBP6.9□□□□□ -1.3
PTCH1-216ENST00000548379 SETDB2Q96T68 719 aa6.9□□□□□ -1.3
PTCH1-216ENST00000548379 CHRDQ9H2X0 955 aa6.9□□□□□ -1.3
PTCH1-216ENST00000548379 ZFYVE28Q9HCC9 887 aa6.9□□□□□ -1.3
PTCH1-216ENST00000548379 FOXD3Q9UJU5 478 aaPredicted RBP6.9□□□□□ -1.3
PTCH1-216ENST00000548379 ATXN7L1Q9ULK2 861 aaPredicted RBP6.9□□□□□ -1.3
PTCH1-216ENST00000548379 DCDC2BA2VCK2 349 aa6.89□□□□□ -1.31
PTCH1-216ENST00000548379 KHNYNO15037 678 aaKnown RBP6.89□□□□□ -1.31
PTCH1-216ENST00000548379 CPNE3O75131 537 aaKnown RBP6.89□□□□□ -1.31
PTCH1-216ENST00000548379 PPFIA3O75145 1194 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms