RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 NBPF26B4DH59 902 aa21.14■□□□□ 0.97
SVOP-202ENST00000548229 PRKAR2BP31323 418 aa21.14■□□□□ 0.97
SVOP-202ENST00000548229 SCNN1DP51172 638 aa21.14■□□□□ 0.97
SVOP-202ENST00000548229 GRM1Q13255 1194 aa21.14■□□□□ 0.97
SVOP-202ENST00000548229 CYP4F22Q6NT55 531 aa21.14■□□□□ 0.97
SVOP-202ENST00000548229 NBPF10Q6P3W6 841 aaKnown RBP21.14■□□□□ 0.97
SVOP-202ENST00000548229 NBPF15Q8N660 670 aa21.14■□□□□ 0.97
SVOP-202ENST00000548229 PHACTR3Q96KR7 559 aa21.14■□□□□ 0.97
SVOP-202ENST00000548229 CFAP53Q96M91 514 aa21.14■□□□□ 0.97
SVOP-202ENST00000548229 TMX4Q9H1E5 349 aaPredicted RBP21.14■□□□□ 0.97
SVOP-202ENST00000548229 NUDCQ9Y266 331 aa21.14■□□□□ 0.97
SVOP-202ENST00000548229 ERVV-1B6SEH8 477 aa21.13■□□□□ 0.97
SVOP-202ENST00000548229 HOXA10P31260 410 aaPredicted RBP21.13■□□□□ 0.97
SVOP-202ENST00000548229 EPS15P42566 896 aa21.13■□□□□ 0.97
SVOP-202ENST00000548229 VPS33BQ9H267 617 aa21.13■□□□□ 0.97
SVOP-202ENST00000548229 THSD7BQ9C0I4 1608 aa21.13■□□□□ 0.97
SVOP-202ENST00000548229 SNED1Q8TER0 1413 aa21.12■□□□□ 0.97
SVOP-202ENST00000548229 HTATSF1O43719 755 aaKnown RBP21.12■□□□□ 0.97
SVOP-202ENST00000548229 HLFQ16534 295 aa21.12■□□□□ 0.97
SVOP-202ENST00000548229 CST9Q5W186 159 aa21.12■□□□□ 0.97
SVOP-202ENST00000548229 NIM1KQ8IY84 436 aa21.12■□□□□ 0.97
SVOP-202ENST00000548229 RSPH6AQ9H0K4 717 aa21.12■□□□□ 0.97
SVOP-202ENST00000548229 RBM17Q96I25 401 aaKnown RBP21.11■□□□□ 0.97
SVOP-202ENST00000548229 HHIPL1Q96JK4 782 aa21.11■□□□□ 0.97
SVOP-202ENST00000548229 ADARB2Q9NS39 739 aaKnown RBP21.11■□□□□ 0.97
SVOP-202ENST00000548229 CRAMP1Q96RY5 1269 aa21.1■□□□□ 0.97
SVOP-202ENST00000548229 TRPM7Q96QT4 1865 aa21.09■□□□□ 0.97
SVOP-202ENST00000548229 MCM10Q7L590 875 aa21.09■□□□□ 0.97
SVOP-202ENST00000548229 IBTKQ9P2D0 1353 aaPredicted RBP21.09■□□□□ 0.97
SVOP-202ENST00000548229 TRAF5O00463 557 aa21.08■□□□□ 0.97
SVOP-202ENST00000548229 TAF7Q15545 349 aaPredicted RBP21.08■□□□□ 0.97
SVOP-202ENST00000548229 RIC1Q4ADV7 1423 aa21.08■□□□□ 0.97
SVOP-202ENST00000548229 KIF6Q6ZMV9 814 aa21.08■□□□□ 0.97
SVOP-202ENST00000548229 SAPCD2Q86UD0 394 aa21.08■□□□□ 0.97
SVOP-202ENST00000548229 NUTM1Q86Y26 1132 aa21.08■□□□□ 0.97
SVOP-202ENST00000548229 GPRC5DQ9NZD1 345 aa21.08■□□□□ 0.97
SVOP-202ENST00000548229 PPEF1O14829 653 aaPredicted RBP21.07■□□□□ 0.96
SVOP-202ENST00000548229 BRPF1P55201 1214 aaPredicted RBP21.07■□□□□ 0.96
SVOP-202ENST00000548229 FMR1Q06787 632 aaKnown RBP eCLIP21.07■□□□□ 0.96
SVOP-202ENST00000548229 MAP3K15Q6ZN16 1313 aa21.06■□□□□ 0.96
SVOP-202ENST00000548229 PPIP5K2O43314 1243 aa21.06■□□□□ 0.96
SVOP-202ENST00000548229 AOC2O75106 756 aa21.06■□□□□ 0.96
SVOP-202ENST00000548229 SUPT20HQ8NEM7 779 aa21.06■□□□□ 0.96
SVOP-202ENST00000548229 ZC3H15Q8WU90 426 aaKnown RBP21.06■□□□□ 0.96
SVOP-202ENST00000548229 CFAP44Q96MT7 982 aa21.06■□□□□ 0.96
SVOP-202ENST00000548229 ABCC12Q96J65 1359 aa21.06■□□□□ 0.96
SVOP-202ENST00000548229 LTBP1Q14766 1721 aa21.06■□□□□ 0.96
SVOP-202ENST00000548229 CELF2O95319 508 aaKnown RBP21.05■□□□□ 0.96
SVOP-202ENST00000548229 PNISRQ8TF01 805 aaKnown RBP21.05■□□□□ 0.96
SVOP-202ENST00000548229 MCOLN1Q9GZU1 580 aa21.05■□□□□ 0.96
SVOP-202ENST00000548229 TSKSQ9UJT2 592 aa21.05■□□□□ 0.96
SVOP-202ENST00000548229 COL4A5P29400 1685 aa21.05■□□□□ 0.96
SVOP-202ENST00000548229 U2AF1L5P0DN76 240 aaPredicted RBP21.04■□□□□ 0.96
SVOP-202ENST00000548229 U2AF1Q01081 240 aaKnown RBP eCLIP21.04■□□□□ 0.96
SVOP-202ENST00000548229 PGAP2Q9UHJ9 254 aa21.04■□□□□ 0.96
SVOP-202ENST00000548229 ZNRF3Q9ULT6 936 aa21.04■□□□□ 0.96
SVOP-202ENST00000548229 CDHR2Q9BYE9 1310 aa21.04■□□□□ 0.96
SVOP-202ENST00000548229 CNGB1Q14028 1251 aaPredicted RBP21.03■□□□□ 0.96
SVOP-202ENST00000548229 NGEFQ8N5V2 710 aa21.03■□□□□ 0.96
SVOP-202ENST00000548229 NLRP3Q96P20 1036 aa21.03■□□□□ 0.96
SVOP-202ENST00000548229 PPP1R42Q7Z4L9 355 aa21.02■□□□□ 0.96
SVOP-202ENST00000548229 ATP6V0A2Q9Y487 856 aa21.02■□□□□ 0.96
SVOP-202ENST00000548229 TNRC18O15417 2968 aaPredicted RBP21.01■□□□□ 0.95
SVOP-202ENST00000548229 CXCL9Q07325 125 aa21.01■□□□□ 0.95
SVOP-202ENST00000548229 NOGQ13253 232 aa21.01■□□□□ 0.95
SVOP-202ENST00000548229 DCTN1Q14203 1278 aa21.01■□□□□ 0.95
SVOP-202ENST00000548229 TNIP1Q15025 636 aa21.01■□□□□ 0.95
SVOP-202ENST00000548229 AOC3Q16853 763 aa21.01■□□□□ 0.95
SVOP-202ENST00000548229 SUSD4Q5VX71 490 aa21.01■□□□□ 0.95
SVOP-202ENST00000548229 CDC37L1Q7L3B6 337 aa21.01■□□□□ 0.95
SVOP-202ENST00000548229 TCERG1O14776 1098 aaKnown RBP21■□□□□ 0.95
SVOP-202ENST00000548229 GPTP24298 496 aa21■□□□□ 0.95
SVOP-202ENST00000548229 DGKZQ13574 1117 aa21■□□□□ 0.95
SVOP-202ENST00000548229 PARP10Q53GL7 1025 aa21■□□□□ 0.95
SVOP-202ENST00000548229 ZNF34Q8IZ26 560 aa21■□□□□ 0.95
SVOP-202ENST00000548229 RTFDC1Q9BY42 306 aaPredicted RBP21■□□□□ 0.95
SVOP-202ENST00000548229 RRP7AQ9Y3A4 280 aaKnown RBP21■□□□□ 0.95
SVOP-202ENST00000548229 PDE4DIPQ5VU43 2346 aa21■□□□□ 0.95
SVOP-202ENST00000548229 NUP98P52948 1817 aa20.99■□□□□ 0.95
SVOP-202ENST00000548229 NEFMP07197 916 aa20.99■□□□□ 0.95
SVOP-202ENST00000548229 GMPSP49915 693 aaPredicted RBP20.99■□□□□ 0.95
SVOP-202ENST00000548229 CIAPIN1Q6FI81 312 aa20.99■□□□□ 0.95
SVOP-202ENST00000548229 TTLL7Q6ZT98 887 aa20.99■□□□□ 0.95
SVOP-202ENST00000548229 BCL2L13Q9BXK5 485 aa20.99■□□□□ 0.95
SVOP-202ENST00000548229 GLIS2Q9BZE0 524 aaPredicted RBP20.99■□□□□ 0.95
SVOP-202ENST00000548229 UBN2Q6ZU65 1347 aa20.99■□□□□ 0.95
SVOP-202ENST00000548229 BBOX1O75936 387 aa20.98■□□□□ 0.95
SVOP-202ENST00000548229 NTSR2O95665 410 aa20.98■□□□□ 0.95
SVOP-202ENST00000548229 MIS18AQ9NYP9 233 aa20.98■□□□□ 0.95
SVOP-202ENST00000548229 LAMB4A4D0S4 1761 aa20.97■□□□□ 0.95
SVOP-202ENST00000548229 SLC10A5Q5PT55 438 aa20.97■□□□□ 0.95
SVOP-202ENST00000548229 DPP8Q6V1X1 898 aaPredicted RBP20.97■□□□□ 0.95
SVOP-202ENST00000548229 GIGYF2Q6Y7W6 1299 aaKnown RBP20.97■□□□□ 0.95
SVOP-202ENST00000548229 ZBTB3Q9H5J0 574 aa20.97■□□□□ 0.95
SVOP-202ENST00000548229 ZNF408Q9H9D4 720 aa20.97■□□□□ 0.95
SVOP-202ENST00000548229 CASP8AP2Q9UKL3 1982 aa20.97■□□□□ 0.95
SVOP-202ENST00000548229 H7C1D1 291 aa20.96■□□□□ 0.95
SVOP-202ENST00000548229 MYL6BP14649 208 aa20.96■□□□□ 0.95
SVOP-202ENST00000548229 CCER1Q8TC90 406 aaPredicted RBP20.96■□□□□ 0.95
SVOP-202ENST00000548229 ERBB4Q15303 1308 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms