RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 SLC34A2O95436 690 aa10.67□□□□□ -0.7
TMEM116-205ENST00000547878 TATP17735 454 aaPredicted RBP10.67□□□□□ -0.7
TMEM116-205ENST00000547878 KCNA3P22001 575 aa10.67□□□□□ -0.7
TMEM116-205ENST00000547878 SIK1P57059 783 aa10.67□□□□□ -0.7
TMEM116-205ENST00000547878 SMARCC1Q92922 1105 aaPredicted RBP10.67□□□□□ -0.7
TMEM116-205ENST00000547878 PHACTR3Q96KR7 559 aa10.67□□□□□ -0.7
TMEM116-205ENST00000547878 AXDND1Q5T1B0 1012 aaPredicted RBP10.67□□□□□ -0.7
TMEM116-205ENST00000547878 API5Q9BZZ5 524 aaKnown RBP10.67□□□□□ -0.7
TMEM116-205ENST00000547878 MBIPQ9NS73 344 aa10.67□□□□□ -0.7
TMEM116-205ENST00000547878 PLEKHG2Q9H7P9 1386 aa10.66□□□□□ -0.7
TMEM116-205ENST00000547878 IRX3P78415 501 aaPredicted RBP10.66□□□□□ -0.7
TMEM116-205ENST00000547878 COG3Q96JB2 828 aa10.66□□□□□ -0.7
TMEM116-205ENST00000547878 LNPKQ9C0E8 428 aa10.66□□□□□ -0.7
TMEM116-205ENST00000547878 TWISTNBQ3B726 338 aaPredicted RBP10.65□□□□□ -0.7
TMEM116-205ENST00000547878 RNF181Q9P0P0 153 aa10.65□□□□□ -0.7
TMEM116-205ENST00000547878 ASAP1Q9ULH1 1129 aa10.65□□□□□ -0.7
TMEM116-205ENST00000547878 EMILIN1Q9Y6C2 1016 aa10.65□□□□□ -0.7
TMEM116-205ENST00000547878 RTL1A6NKG5 1358 aa10.65□□□□□ -0.7
TMEM116-205ENST00000547878 ARFGEF1Q9Y6D6 1849 aa10.65□□□□□ -0.7
TMEM116-205ENST00000547878 C4AP0C0L4 1744 aa10.65□□□□□ -0.7
TMEM116-205ENST00000547878 TNRC6CQ9HCJ0 1690 aaKnown RBP10.64□□□□□ -0.71
TMEM116-205ENST00000547878 PTMSP20962 102 aa10.64□□□□□ -0.71
TMEM116-205ENST00000547878 HSP90AB2PQ58FF8 381 aa10.64□□□□□ -0.71
TMEM116-205ENST00000547878 HMGB2P26583 209 aaKnown RBP10.64□□□□□ -0.71
TMEM116-205ENST00000547878 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.64□□□□□ -0.71
TMEM116-205ENST00000547878 SIRT2Q8IXJ6 389 aa10.64□□□□□ -0.71
TMEM116-205ENST00000547878 TSPYL6Q8N831 410 aa10.64□□□□□ -0.71
TMEM116-205ENST00000547878 SMC1BQ8NDV3 1235 aa10.64□□□□□ -0.71
TMEM116-205ENST00000547878 KIF2CQ99661 725 aa10.64□□□□□ -0.71
TMEM116-205ENST00000547878 PTMAP06454 111 aaKnown RBP10.63□□□□□ -0.71
TMEM116-205ENST00000547878 HMGB1P09429 215 aaKnown RBP10.63□□□□□ -0.71
TMEM116-205ENST00000547878 HMOX1P09601 288 aa10.63□□□□□ -0.71
TMEM116-205ENST00000547878 ATP6V1AP38606 617 aa10.63□□□□□ -0.71
TMEM116-205ENST00000547878 INTS3Q68E01 1043 aaKnown RBP10.63□□□□□ -0.71
TMEM116-205ENST00000547878 ZNF622Q969S3 477 aaKnown RBP eCLIP10.63□□□□□ -0.712e-7■□□□□ 10.2
TMEM116-205ENST00000547878 TRIM44Q96DX7 344 aaPredicted RBP10.63□□□□□ -0.71
TMEM116-205ENST00000547878 DCAF5Q96JK2 942 aa10.63□□□□□ -0.71
TMEM116-205ENST00000547878 GYS1P13807 737 aa10.62□□□□□ -0.71
TMEM116-205ENST00000547878 ARHGEF1Q92888 912 aaKnown RBP10.62□□□□□ -0.71
TMEM116-205ENST00000547878 SLC4A9Q96Q91 983 aa10.62□□□□□ -0.71
TMEM116-205ENST00000547878 CCDC87Q9NVE4 849 aa10.62□□□□□ -0.71
TMEM116-205ENST00000547878 SBF1O95248 1867 aa10.62□□□□□ -0.71
TMEM116-205ENST00000547878 PTPRCP08575 1304 aa10.62□□□□□ -0.71
TMEM116-205ENST00000547878 CDC45O75419 566 aa10.61□□□□□ -0.71
TMEM116-205ENST00000547878 RAB3GAP1Q15042 981 aa10.61□□□□□ -0.71
TMEM116-205ENST00000547878 NKX1-1Q15270 411 aaPredicted RBP10.61□□□□□ -0.71
TMEM116-205ENST00000547878 GRIPAP1Q4V328 841 aa10.61□□□□□ -0.71
TMEM116-205ENST00000547878 CLEC17AQ6ZS10 378 aa10.61□□□□□ -0.71
TMEM116-205ENST00000547878 TBC1D9Q6ZT07 1266 aa10.61□□□□□ -0.71
TMEM116-205ENST00000547878 NLGN1Q8N2Q7 840 aa10.61□□□□□ -0.71
TMEM116-205ENST00000547878 THUMPD2Q9BTF0 503 aaKnown RBP10.61□□□□□ -0.71
TMEM116-205ENST00000547878 TRAK2O60296 914 aa10.61□□□□□ -0.71
TMEM116-205ENST00000547878 RASSF7Q02833 373 aa10.61□□□□□ -0.71
TMEM116-205ENST00000547878 TRAPPC3LQ5T215 181 aa10.61□□□□□ -0.71
TMEM116-205ENST00000547878 ANKRD45Q5TZF3 282 aa10.61□□□□□ -0.71
TMEM116-205ENST00000547878 C8orf58Q8NAV2 365 aa10.61□□□□□ -0.71
TMEM116-205ENST00000547878 GBP4Q96PP9 640 aa10.61□□□□□ -0.71
TMEM116-205ENST00000547878 DCTPP1Q9H773 170 aa10.61□□□□□ -0.71
TMEM116-205ENST00000547878 ATG3Q9NT62 314 aa10.61□□□□□ -0.71
TMEM116-205ENST00000547878 KDRP35968 1356 aa10.6□□□□□ -0.71
TMEM116-205ENST00000547878 ESPNB1AK53 854 aa10.6□□□□□ -0.71
TMEM116-205ENST00000547878 K7ELQ4 463 aaPredicted RBP10.6□□□□□ -0.71
TMEM116-205ENST00000547878 CHRNA5P30532 468 aa10.6□□□□□ -0.71
TMEM116-205ENST00000547878 DALRD3Q5D0E6 543 aaKnown RBP10.6□□□□□ -0.71
TMEM116-205ENST00000547878 TMOD3Q9NYL9 352 aa10.6□□□□□ -0.71
TMEM116-205ENST00000547878 PIM2Q9P1W9 311 aa10.6□□□□□ -0.71
TMEM116-205ENST00000547878 RTCBQ9Y3I0 505 aaKnown RBP10.6□□□□□ -0.71
TMEM116-205ENST00000547878 CHL1O00533 1208 aa10.59□□□□□ -0.71
TMEM116-205ENST00000547878 MRE11P49959 708 aa10.59□□□□□ -0.71
TMEM116-205ENST00000547878 RPAP2Q8IXW5 612 aaPredicted RBP10.59□□□□□ -0.71
TMEM116-205ENST00000547878 ANKRD44Q8N8A2 993 aa10.59□□□□□ -0.71
TMEM116-205ENST00000547878 PARP3Q9Y6F1 533 aa10.59□□□□□ -0.71
TMEM116-205ENST00000547878 IBTKQ9P2D0 1353 aaPredicted RBP10.59□□□□□ -0.71
TMEM116-205ENST00000547878 XRCC6P12956 609 aaKnown RBP eCLIP10.58□□□□□ -0.72
TMEM116-205ENST00000547878 ZSCAN20P17040 1043 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-205ENST00000547878 DDR1Q08345 913 aa10.58□□□□□ -0.72
TMEM116-205ENST00000547878 TMEM132AQ24JP5 1023 aa10.58□□□□□ -0.72
TMEM116-205ENST00000547878 SKOR2Q2VWA4 1001 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-205ENST00000547878 YY1AP1Q9H869 796 aa10.58□□□□□ -0.72
TMEM116-205ENST00000547878 ZHX1Q9UKY1 873 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-205ENST00000547878 COL5A3P25940 1745 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-205ENST00000547878 NCAPD2Q15021 1401 aa10.58□□□□□ -0.72
TMEM116-205ENST00000547878 FOXN1O15353 648 aa10.58□□□□□ -0.72
TMEM116-205ENST00000547878 HSP90AB1P08238 724 aaKnown RBP10.58□□□□□ -0.72
TMEM116-205ENST00000547878 GSPT1P15170 499 aaKnown RBP10.58□□□□□ -0.72
TMEM116-205ENST00000547878 EIF4A2Q14240 407 aaKnown RBP10.58□□□□□ -0.72
TMEM116-205ENST00000547878 CNPY4Q8N129 248 aa10.58□□□□□ -0.72
TMEM116-205ENST00000547878 TNPO1Q92973 898 aaKnown RBP10.58□□□□□ -0.72
TMEM116-205ENST00000547878 C1orf115Q9H7X2 142 aa10.58□□□□□ -0.72
TMEM116-205ENST00000547878 SRP68Q9UHB9 627 aaKnown RBP10.58□□□□□ -0.72
TMEM116-205ENST00000547878 FLT4P35916 1363 aa10.58□□□□□ -0.72
TMEM116-205ENST00000547878 KDM6AO15550 1401 aaPredicted RBP10.57□□□□□ -0.72
TMEM116-205ENST00000547878 POTECB2RU33 542 aa10.57□□□□□ -0.72
TMEM116-205ENST00000547878 RABEP1Q15276 862 aa10.57□□□□□ -0.72
TMEM116-205ENST00000547878 TTC22Q5TAA0 569 aa10.57□□□□□ -0.72
TMEM116-205ENST00000547878 TICAM2Q86XR7 235 aa10.57□□□□□ -0.72
TMEM116-205ENST00000547878 PLEKHM2Q8IWE5 1019 aa10.57□□□□□ -0.72
TMEM116-205ENST00000547878 MKRN1Q9UHC7 482 aaKnown RBP10.57□□□□□ -0.72
TMEM116-205ENST00000547878 MYH14Q7Z406 1995 aaKnown RBP10.57□□□□□ -0.72
TMEM116-205ENST00000547878 VEGFAP15692 232 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms