RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 TFCP2L1Q9NZI6 479 aa10.11□□□□□ -0.79
CCDC65-203ENST00000547861 PNPLA7Q6ZV29 1317 aa10.11□□□□□ -0.79
CCDC65-203ENST00000547861 PHKG2P15735 406 aa10.1□□□□□ -0.79
CCDC65-203ENST00000547861 PYGBP11216 843 aa10.1□□□□□ -0.79
CCDC65-203ENST00000547861 KLHL34Q8N239 644 aa10.1□□□□□ -0.79
CCDC65-203ENST00000547861 SLC16A10Q8TF71 515 aa10.1□□□□□ -0.79
CCDC65-203ENST00000547861 DDRGK1Q96HY6 314 aa10.1□□□□□ -0.79
CCDC65-203ENST00000547861 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.1□□□□□ -0.79
CCDC65-203ENST00000547861 CHPF2Q9P2E5 772 aa10.1□□□□□ -0.79
CCDC65-203ENST00000547861 CCNL1Q9UK58 526 aaPredicted RBP10.1□□□□□ -0.79
CCDC65-203ENST00000547861 SPG7Q9UQ90 795 aa10.1□□□□□ -0.79
CCDC65-203ENST00000547861 LY75O60449 1722 aa10.1□□□□□ -0.79
CCDC65-203ENST00000547861 QSER1Q2KHR3 1735 aa10.1□□□□□ -0.79
CCDC65-203ENST00000547861 EIF2S2P20042 333 aaKnown RBP10.09□□□□□ -0.79
CCDC65-203ENST00000547861 POLD1P28340 1107 aa10.09□□□□□ -0.79
CCDC65-203ENST00000547861 ANKRD45Q5TZF3 282 aa10.09□□□□□ -0.79
CCDC65-203ENST00000547861 RPAP2Q8IXW5 612 aaPredicted RBP10.09□□□□□ -0.79
CCDC65-203ENST00000547861 PHAXQ9H814 394 aaKnown RBP10.09□□□□□ -0.79
CCDC65-203ENST00000547861 CHD4Q14839 1912 aa10.08□□□□□ -0.8
CCDC65-203ENST00000547861 ADCY9O60503 1353 aa10.08□□□□□ -0.8
CCDC65-203ENST00000547861 DCTPP1Q9H773 170 aa10.08□□□□□ -0.8
CCDC65-203ENST00000547861 TJP1Q07157 1748 aa10.08□□□□□ -0.8
CCDC65-203ENST00000547861 CYP27B1O15528 508 aa10.07□□□□□ -0.8
CCDC65-203ENST00000547861 IFNL2Q8IZJ0 200 aa10.07□□□□□ -0.8
CCDC65-203ENST00000547861 ZNF784Q8NCA9 323 aaPredicted RBP10.07□□□□□ -0.8
CCDC65-203ENST00000547861 SLC52A2Q9HAB3 445 aa10.07□□□□□ -0.8
CCDC65-203ENST00000547861 KCPQ6ZWJ8 1503 aa10.07□□□□□ -0.8
CCDC65-203ENST00000547861 GIGYF1O75420 1035 aaPredicted RBP10.07□□□□□ -0.8
CCDC65-203ENST00000547861 GPR162Q16538 588 aa10.07□□□□□ -0.8
CCDC65-203ENST00000547861 CHMP4AQ9BY43 222 aa10.07□□□□□ -0.8
CCDC65-203ENST00000547861 FBXO3Q9UK99 471 aa10.07□□□□□ -0.8
CCDC65-203ENST00000547861 PCDHB8Q9UN66 801 aa10.07□□□□□ -0.8
CCDC65-203ENST00000547861 PCDH11XQ9BZA7 1347 aa10.06□□□□□ -0.8
CCDC65-203ENST00000547861 PCDH11YQ9BZA8 1340 aa10.06□□□□□ -0.8
CCDC65-203ENST00000547861 COL24A1Q17RW2 1714 aa10.06□□□□□ -0.8
CCDC65-203ENST00000547861 PRAMEF22A3QJZ6 481 aa10.06□□□□□ -0.8
CCDC65-203ENST00000547861 ANXA1P04083 346 aa10.06□□□□□ -0.8
CCDC65-203ENST00000547861 GNAI2P04899 355 aa10.06□□□□□ -0.8
CCDC65-203ENST00000547861 GNAI3P08754 354 aa10.06□□□□□ -0.8
CCDC65-203ENST00000547861 HMMRO75330 724 aa10.05□□□□□ -0.8
CCDC65-203ENST00000547861 BMP2KLQ5H9B9 411 aa10.05□□□□□ -0.8
CCDC65-203ENST00000547861 COL23A1Q86Y22 540 aaPredicted RBP10.05□□□□□ -0.8
CCDC65-203ENST00000547861 DCAF5Q96JK2 942 aa10.05□□□□□ -0.8
CCDC65-203ENST00000547861 ANKRD36CQ5JPF3 1778 aa10.05□□□□□ -0.8
CCDC65-203ENST00000547861 SLC39A6Q13433 755 aa10.04□□□□□ -0.8
CCDC65-203ENST00000547861 PROSER3Q2NL68 480 aa10.04□□□□□ -0.8
CCDC65-203ENST00000547861 MSL1Q68DK7 614 aa10.04□□□□□ -0.8
CCDC65-203ENST00000547861 ZNF790Q6PG37 636 aa10.04□□□□□ -0.8
CCDC65-203ENST00000547861 NLGN2Q8NFZ4 835 aa10.04□□□□□ -0.8
CCDC65-203ENST00000547861 DNAAF4Q8WXU2 420 aa10.04□□□□□ -0.8
CCDC65-203ENST00000547861 TBC1D32Q96NH3 1257 aa10.04□□□□□ -0.8
CCDC65-203ENST00000547861 DBF4Q9UBU7 674 aaPredicted RBP10.04□□□□□ -0.8
CCDC65-203ENST00000547861 PALLDQ8WX93 1383 aa10.04□□□□□ -0.8
CCDC65-203ENST00000547861 HSP90AB1P08238 724 aaKnown RBP10.04□□□□□ -0.8
CCDC65-203ENST00000547861 TMEM121BQ9BXQ6 578 aaPredicted RBP10.04□□□□□ -0.8
CCDC65-203ENST00000547861 SRCIN1Q9C0H9 1055 aa10.04□□□□□ -0.8
CCDC65-203ENST00000547861 UPF2Q9HAU5 1272 aaKnown RBP10.04□□□□□ -0.8
CCDC65-203ENST00000547861 LRRFIP2Q9Y608 721 aaKnown RBP10.04□□□□□ -0.8
CCDC65-203ENST00000547861 PI4KAP2A4QPH2 592 aa10.03□□□□□ -0.8
CCDC65-203ENST00000547861 UBTFL1P0CB47 393 aaPredicted RBP10.03□□□□□ -0.8
CCDC65-203ENST00000547861 BEND3Q5T5X7 828 aa10.03□□□□□ -0.8
CCDC65-203ENST00000547861 PLEKHM2Q8IWE5 1019 aa10.03□□□□□ -0.8
CCDC65-203ENST00000547861 PI4KAP1Q8N8J0 262 aa10.03□□□□□ -0.8
CCDC65-203ENST00000547861 NFATC2IPQ8NCF5 419 aa10.03□□□□□ -0.8
CCDC65-203ENST00000547861 USP44Q9H0E7 712 aa10.03□□□□□ -0.8
CCDC65-203ENST00000547861 TAF1LQ8IZX4 1826 aa10.03□□□□□ -0.8
CCDC65-203ENST00000547861 PNMA6EA0A0J9YXQ4 647 aa10.02□□□□□ -0.8
CCDC65-203ENST00000547861 TULP1O00294 542 aaPredicted RBP10.02□□□□□ -0.8
CCDC65-203ENST00000547861 SNPHO15079 494 aa10.02□□□□□ -0.8
CCDC65-203ENST00000547861 SMARCA5O60264 1052 aaPredicted RBP10.02□□□□□ -0.8
CCDC65-203ENST00000547861 MFAP1P55081 439 aaKnown RBP10.02□□□□□ -0.8
CCDC65-203ENST00000547861 PIGBQ92521 554 aa10.02□□□□□ -0.8
CCDC65-203ENST00000547861 SMARCC1Q92922 1105 aaPredicted RBP10.02□□□□□ -0.8
CCDC65-203ENST00000547861 DDX21Q9NR30 783 aaKnown RBP eCLIP10.02□□□□□ -0.8
CCDC65-203ENST00000547861 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.02□□□□□ -0.8
CCDC65-203ENST00000547861 IBTKQ9P2D0 1353 aaPredicted RBP10.02□□□□□ -0.81
CCDC65-203ENST00000547861 APBB1O00213 710 aa10.02□□□□□ -0.81
CCDC65-203ENST00000547861 GSPT1P15170 499 aaKnown RBP10.02□□□□□ -0.81
CCDC65-203ENST00000547861 ATP8B2P98198 1209 aa10.02□□□□□ -0.81
CCDC65-203ENST00000547861 PDIA6Q15084 440 aa10.02□□□□□ -0.81
CCDC65-203ENST00000547861 TTC22Q5TAA0 569 aa10.02□□□□□ -0.81
CCDC65-203ENST00000547861 FLAD1Q8NFF5 587 aa10.02□□□□□ -0.81
CCDC65-203ENST00000547861 OTUD7AQ8TE49 926 aaPredicted RBP10.02□□□□□ -0.81
CCDC65-203ENST00000547861 ZNF496Q96IT1 587 aaPredicted RBP10.02□□□□□ -0.81
CCDC65-203ENST00000547861 HYPKQ9NX55 129 aa10.02□□□□□ -0.81
CCDC65-203ENST00000547861 MYH3P11055 1940 aa10.01□□□□□ -0.81
CCDC65-203ENST00000547861 CABP4P57796 275 aa10.01□□□□□ -0.81
CCDC65-203ENST00000547861 NKX1-1Q15270 411 aaPredicted RBP10.01□□□□□ -0.81
CCDC65-203ENST00000547861 TTC5Q8N0Z6 440 aa10.01□□□□□ -0.81
CCDC65-203ENST00000547861 AK7Q96M32 723 aa10.01□□□□□ -0.81
CCDC65-203ENST00000547861 EXOC6BQ9Y2D4 811 aa10.01□□□□□ -0.81
CCDC65-203ENST00000547861 MAP3K2Q9Y2U5 619 aa10.01□□□□□ -0.81
CCDC65-203ENST00000547861 YBX3P16989 372 aaKnown RBP eCLIP10□□□□□ -0.81
CCDC65-203ENST00000547861 HMGB2P26583 209 aaKnown RBP10□□□□□ -0.81
CCDC65-203ENST00000547861 KSR2Q6VAB6 950 aa10□□□□□ -0.81
CCDC65-203ENST00000547861 SMIM5Q71RC9 77 aa10□□□□□ -0.81
CCDC65-203ENST00000547861 C16orf71Q8IYS4 520 aaPredicted RBP10□□□□□ -0.81
CCDC65-203ENST00000547861 UBE2Q2Q8WVN8 375 aa10□□□□□ -0.81
CCDC65-203ENST00000547861 FMNL2Q96PY5 1086 aa10□□□□□ -0.81
CCDC65-203ENST00000547861 PODXL2Q9NZ53 605 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms