RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 USP16Q9Y5T5 823 aa18.13■□□□□ 0.49
CCDC59-202ENST00000547758 CC2D1BQ5T0F9 858 aaKnown RBP18.12■□□□□ 0.49
CCDC59-202ENST00000547758 TPTE2Q6XPS3 522 aa18.12■□□□□ 0.49
CCDC59-202ENST00000547758 SYNE4Q8N205 404 aa18.12■□□□□ 0.49
CCDC59-202ENST00000547758 SPDYE1Q8NFV5 336 aaPredicted RBP18.12■□□□□ 0.49
CCDC59-202ENST00000547758 NUP98P52948 1817 aa18.12■□□□□ 0.49
CCDC59-202ENST00000547758 NIP7Q9Y221 180 aaKnown RBP eCLIP18.11■□□□□ 0.49
CCDC59-202ENST00000547758 SNED1Q8TER0 1413 aa18.11■□□□□ 0.49
CCDC59-202ENST00000547758 LAMB4A4D0S4 1761 aa18.11■□□□□ 0.49
CCDC59-202ENST00000547758 COL4A5P29400 1685 aa18.1■□□□□ 0.49
CCDC59-202ENST00000547758 PRAMEF22A3QJZ6 481 aa18.1■□□□□ 0.49
CCDC59-202ENST00000547758 ALDH1B1P30837 517 aa18.1■□□□□ 0.49
CCDC59-202ENST00000547758 DDX21Q9NR30 783 aaKnown RBP eCLIP18.1■□□□□ 0.49
CCDC59-202ENST00000547758 KIF7Q2M1P5 1343 aa18.09■□□□□ 0.49
CCDC59-202ENST00000547758 FAM177BA6PVY3 158 aa18.09■□□□□ 0.49
CCDC59-202ENST00000547758 RGL2O15211 777 aa18.09■□□□□ 0.49
CCDC59-202ENST00000547758 PER1O15534 1290 aaPredicted RBP18.09■□□□□ 0.49
CCDC59-202ENST00000547758 JDP2Q8WYK2 163 aa18.09■□□□□ 0.49
CCDC59-202ENST00000547758 PSMD1Q99460 953 aa18.09■□□□□ 0.49
CCDC59-202ENST00000547758 SNRPA1P09661 255 aaKnown RBP18.08■□□□□ 0.48
CCDC59-202ENST00000547758 LMOD1P29536 600 aaPredicted RBP18.07■□□□□ 0.48
CCDC59-202ENST00000547758 ECE1P42892 770 aa18.07■□□□□ 0.48
CCDC59-202ENST00000547758 EIF6P56537 245 aaKnown RBP18.07■□□□□ 0.48
CCDC59-202ENST00000547758 PAXIP1Q6ZW49 1069 aaPredicted RBP18.07■□□□□ 0.48
CCDC59-202ENST00000547758 CAPNS2Q96L46 248 aa18.07■□□□□ 0.48
CCDC59-202ENST00000547758 BEGAINQ9BUH8 593 aa18.07■□□□□ 0.48
CCDC59-202ENST00000547758 GJA3Q9Y6H8 435 aa18.07■□□□□ 0.48
CCDC59-202ENST00000547758 CASP8AP2Q9UKL3 1982 aa18.07■□□□□ 0.48
CCDC59-202ENST00000547758 CCDC85CA6NKD9 419 aa18.06■□□□□ 0.48
CCDC59-202ENST00000547758 NBPF26B4DH59 902 aa18.06■□□□□ 0.48
CCDC59-202ENST00000547758 GTF2E1P29083 439 aaPredicted RBP18.06■□□□□ 0.48
CCDC59-202ENST00000547758 NBPF10Q6P3W6 841 aaKnown RBP18.06■□□□□ 0.48
CCDC59-202ENST00000547758 NBPF15Q8N660 670 aa18.06■□□□□ 0.48
CCDC59-202ENST00000547758 PHACTR3Q96KR7 559 aa18.06■□□□□ 0.48
CCDC59-202ENST00000547758 PCGF6Q9BYE7 350 aa18.06■□□□□ 0.48
CCDC59-202ENST00000547758 PRKAR2BP31323 418 aa18.05■□□□□ 0.48
CCDC59-202ENST00000547758 MLLT1Q03111 559 aaPredicted RBP18.05■□□□□ 0.48
CCDC59-202ENST00000547758 FMR1Q06787 632 aaKnown RBP eCLIP18.05■□□□□ 0.48
CCDC59-202ENST00000547758 CRY2Q49AN0 593 aa18.05■□□□□ 0.48
CCDC59-202ENST00000547758 CYP4F22Q6NT55 531 aa18.05■□□□□ 0.48
CCDC59-202ENST00000547758 ABCC12Q96J65 1359 aa18.04■□□□□ 0.48
CCDC59-202ENST00000547758 SCNN1DP51172 638 aa18.04■□□□□ 0.48
CCDC59-202ENST00000547758 GRM1Q13255 1194 aa18.04■□□□□ 0.48
CCDC59-202ENST00000547758 HLFQ16534 295 aa18.04■□□□□ 0.48
CCDC59-202ENST00000547758 CC2D2BQ6DHV5 1058 aa18.04■□□□□ 0.48
CCDC59-202ENST00000547758 GPR101Q96P66 508 aaPredicted RBP18.04■□□□□ 0.48
CCDC59-202ENST00000547758 NPC1L1Q9UHC9 1359 aa18.04■□□□□ 0.48
CCDC59-202ENST00000547758 EPS15P42566 896 aa18.03■□□□□ 0.48
CCDC59-202ENST00000547758 RGS19P49795 217 aa18.03■□□□□ 0.48
CCDC59-202ENST00000547758 RSPH6AQ9H0K4 717 aa18.03■□□□□ 0.48
CCDC59-202ENST00000547758 CST9Q5W186 159 aa18.02■□□□□ 0.48
CCDC59-202ENST00000547758 USP50Q70EL3 339 aaPredicted RBP18.02■□□□□ 0.48
CCDC59-202ENST00000547758 MCM10Q7L590 875 aa18.02■□□□□ 0.48
CCDC59-202ENST00000547758 LARGE2Q8N3Y3 721 aa18.02■□□□□ 0.48
CCDC59-202ENST00000547758 RTF1Q92541 710 aaKnown RBP18.02■□□□□ 0.48
CCDC59-202ENST00000547758 NYXQ9GZU5 481 aa18.02■□□□□ 0.48
CCDC59-202ENST00000547758 TLL2Q9Y6L7 1015 aa18.02■□□□□ 0.48
CCDC59-202ENST00000547758 PDE4DIPQ5VU43 2346 aa18.01■□□□□ 0.47
CCDC59-202ENST00000547758 RIC1Q4ADV7 1423 aa18.01■□□□□ 0.47
CCDC59-202ENST00000547758 TRAF5O00463 557 aa18.01■□□□□ 0.47
CCDC59-202ENST00000547758 PRKAR2AP13861 404 aaKnown RBP18.01■□□□□ 0.47
CCDC59-202ENST00000547758 CNGB1Q14028 1251 aaPredicted RBP18.01■□□□□ 0.47
CCDC59-202ENST00000547758 NUTM1Q86Y26 1132 aa18.01■□□□□ 0.47
CCDC59-202ENST00000547758 TSKSQ9UJT2 592 aa18.01■□□□□ 0.47
CCDC59-202ENST00000547758 DLG5Q8TDM6 1919 aa18■□□□□ 0.47
CCDC59-202ENST00000547758 KDM3BQ7LBC6 1761 aa18■□□□□ 0.47
CCDC59-202ENST00000547758 GRIPAP1Q4V328 841 aa18■□□□□ 0.47
CCDC59-202ENST00000547758 RPGRQ92834 1020 aaKnown RBP18■□□□□ 0.47
CCDC59-202ENST00000547758 AOC2O75106 756 aa17.99■□□□□ 0.47
CCDC59-202ENST00000547758 HOXA10P31260 410 aaPredicted RBP17.99■□□□□ 0.47
CCDC59-202ENST00000547758 MAP2K2P36507 400 aa17.99■□□□□ 0.47
CCDC59-202ENST00000547758 NIM1KQ8IY84 436 aa17.98■□□□□ 0.47
CCDC59-202ENST00000547758 IBTKQ9P2D0 1353 aaPredicted RBP17.98■□□□□ 0.47
CCDC59-202ENST00000547758 ERVV-1B6SEH8 477 aa17.97■□□□□ 0.47
CCDC59-202ENST00000547758 EVX2Q03828 476 aa17.97■□□□□ 0.47
CCDC59-202ENST00000547758 DCTN1Q14203 1278 aa17.97■□□□□ 0.47
CCDC59-202ENST00000547758 SLC51AQ86UW1 340 aa17.97■□□□□ 0.47
CCDC59-202ENST00000547758 CFAP53Q96M91 514 aa17.97■□□□□ 0.47
CCDC59-202ENST00000547758 ADARB2Q9NS39 739 aaKnown RBP17.97■□□□□ 0.47
CCDC59-202ENST00000547758 TNRC18O15417 2968 aaPredicted RBP17.97■□□□□ 0.47
CCDC59-202ENST00000547758 PPEF1O14829 653 aaPredicted RBP17.96■□□□□ 0.47
CCDC59-202ENST00000547758 CA12O43570 354 aa17.96■□□□□ 0.47
CCDC59-202ENST00000547758 SAPCD2Q86UD0 394 aa17.96■□□□□ 0.47
CCDC59-202ENST00000547758 NGEFQ8N5V2 710 aa17.96■□□□□ 0.47
CCDC59-202ENST00000547758 RBM17Q96I25 401 aaKnown RBP17.96■□□□□ 0.47
CCDC59-202ENST00000547758 CRAMP1Q96RY5 1269 aa17.96■□□□□ 0.47
CCDC59-202ENST00000547758 MCOLN1Q9GZU1 580 aa17.96■□□□□ 0.47
CCDC59-202ENST00000547758 GPRC5DQ9NZD1 345 aa17.96■□□□□ 0.47
CCDC59-202ENST00000547758 MAP3K15Q6ZN16 1313 aa17.96■□□□□ 0.46
CCDC59-202ENST00000547758 LAMB2P55268 1798 aa17.95■□□□□ 0.46
CCDC59-202ENST00000547758 TCERG1O14776 1098 aaKnown RBP17.95■□□□□ 0.46
CCDC59-202ENST00000547758 PPIP5K2O43314 1243 aa17.95■□□□□ 0.46
CCDC59-202ENST00000547758 CELF2O95319 508 aaKnown RBP17.95■□□□□ 0.46
CCDC59-202ENST00000547758 CFAP44Q96MT7 982 aa17.95■□□□□ 0.46
CCDC59-202ENST00000547758 PCDH10Q9P2E7 1040 aa17.95■□□□□ 0.46
CCDC59-202ENST00000547758 NUDCQ9Y266 331 aa17.95■□□□□ 0.46
CCDC59-202ENST00000547758 UBN2Q6ZU65 1347 aa17.95■□□□□ 0.46
CCDC59-202ENST00000547758 HTATSF1O43719 755 aaKnown RBP17.94■□□□□ 0.46
CCDC59-202ENST00000547758 GPTP24298 496 aa17.94■□□□□ 0.46
CCDC59-202ENST00000547758 TAF7Q15545 349 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms