RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 ADGRL3Q9HAR2 1447 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 RBM6P78332 1123 aaKnown RBP0.73□□□□□ -2.29
CEP290-203ENST00000547691 PURBQ96QR8 312 aaKnown RBP0.73□□□□□ -2.29
CEP290-203ENST00000547691 AFDNP55196 1824 aaKnown RBP0.73□□□□□ -2.29
CEP290-203ENST00000547691 TAF1LQ8IZX4 1826 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 NRXN1Q9ULB1 1477 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 TIAM2Q8IVF5 1701 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 NRXN2Q9P2S2 1712 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 KCNA6P17658 529 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 CAMK2BQ13554 666 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 PROX2Q3B8N5 592 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 COL27A1Q8IZC6 1860 aaPredicted RBP0.73□□□□□ -2.29
CEP290-203ENST00000547691 TMEM94Q12767 1356 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 MTUS2Q5JR59 1369 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 RXRBP28702 533 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 C1QTNF8P60827 252 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 ZNF800Q2TB10 664 aaPredicted RBP eCLIP0.73□□□□□ -2.29
CEP290-203ENST00000547691 PHF8Q9UPP1 1060 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 TLL2Q9Y6L7 1015 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 SMG6Q86US8 1419 aaKnown RBP0.73□□□□□ -2.29
CEP290-203ENST00000547691 SOS2Q07890 1332 aaPredicted RBP0.73□□□□□ -2.29
CEP290-203ENST00000547691 MEGF6O75095 1541 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 SSC5DA1L4H1 1573 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 TRIM6-TRIM34B2RNG4 842 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 C4AP0C0L4 1744 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 C4BP0C0L5 1744 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 EHBP1Q8NDI1 1231 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 BCORQ6W2J9 1755 aa0.73□□□□□ -2.29
CEP290-203ENST00000547691 CHD7Q9P2D1 2997 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 EIF4EBP3O60516 100 aaPredicted RBP0.72□□□□□ -2.29
CEP290-203ENST00000547691 CELA2BP08218 269 aaPredicted RBP0.72□□□□□ -2.29
CEP290-203ENST00000547691 CEBPAP49715 358 aaPredicted RBP0.72□□□□□ -2.29
CEP290-203ENST00000547691 NCANO14594 1321 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 BRD4O60885 1362 aaPredicted RBP0.72□□□□□ -2.29
CEP290-203ENST00000547691 DBX1A6NMT0 343 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 SIAH2O43255 324 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 AMHP03971 560 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 EFCAB2Q5VUJ9 269 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 USP51Q70EK9 711 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 RBM33Q96EV2 1170 aaKnown RBP0.72□□□□□ -2.29
CEP290-203ENST00000547691 MFRPQ9BY79 579 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 PALD1Q9ULE6 856 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 DICER1Q9UPY3 1922 aaKnown RBP0.72□□□□□ -2.29
CEP290-203ENST00000547691 MSH6P52701 1360 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 COL5A3P25940 1745 aaPredicted RBP0.72□□□□□ -2.29
CEP290-203ENST00000547691 BIN1O00499 593 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 WNT7AO00755 349 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 HNRNPUQ00839 825 aaKnown RBP eCLIP0.72□□□□□ -2.29
CEP290-203ENST00000547691 ANKLE2Q86XL3 938 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 HPS1Q92902 700 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 NAF1Q96HR8 494 aaKnown RBP0.72□□□□□ -2.29
CEP290-203ENST00000547691 ZFP42Q96MM3 310 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 ANKRD26Q9UPS8 1709 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 C1QTNF9BB2RNN3 333 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 BMP1P13497 986 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 ATXN1P54253 815 aaKnown RBP0.72□□□□□ -2.29
CEP290-203ENST00000547691 JAG1P78504 1218 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 RNF19BQ6ZMZ0 732 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 SERINC5Q86VE9 423 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 THEMISQ8N1K5 641 aaPredicted RBP0.72□□□□□ -2.29
CEP290-203ENST00000547691 GIMAP7Q8NHV1 300 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 EPAS1Q99814 870 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 STK24Q9Y6E0 443 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 AFF2P51816 1311 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 KIAA1109Q2LD37 5005 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 BTAF1O14981 1849 aa0.72□□□□□ -2.29
CEP290-203ENST00000547691 SSTR4P31391 388 aa0.71□□□□□ -2.29
CEP290-203ENST00000547691 ZNF784Q8NCA9 323 aaPredicted RBP0.71□□□□□ -2.29
CEP290-203ENST00000547691 FAM198AQ9UFP1 575 aa0.71□□□□□ -2.29
CEP290-203ENST00000547691 DNAH3Q8TD57 4116 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 KDM3BQ7LBC6 1761 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 CCDC144AA2RUR9 1427 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 DUOX1Q9NRD9 1551 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 ARID1BQ8NFD5 2236 aaPredicted RBP0.71□□□□□ -2.3
CEP290-203ENST00000547691 PPFIA2O75334 1257 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 FARP2O94887 1054 aaPredicted RBP0.71□□□□□ -2.3
CEP290-203ENST00000547691 ZNF865P0CJ78 1059 aaPredicted RBP0.71□□□□□ -2.3
CEP290-203ENST00000547691 SRSF11Q05519 484 aaKnown RBP0.71□□□□□ -2.3
CEP290-203ENST00000547691 MRPL14Q6P1L8 145 aaKnown RBP0.71□□□□□ -2.3
CEP290-203ENST00000547691 LYPD4Q6UWN0 246 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 ZNF592Q92610 1267 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 ZIC5Q96T25 663 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 PHF24Q9UPV7 400 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 MAP2P11137 1827 aaKnown RBP0.71□□□□□ -2.3
CEP290-203ENST00000547691 SBF1O95248 1867 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 SBNO1A3KN83 1393 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 KDM6AO15550 1401 aaPredicted RBP0.71□□□□□ -2.3
CEP290-203ENST00000547691 ADGRB1O14514 1584 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 UBR3Q6ZT12 1888 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 EVI5O60447 810 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 GTF2E1P29083 439 aaPredicted RBP0.71□□□□□ -2.3
CEP290-203ENST00000547691 PURAQ00577 322 aaKnown RBP0.71□□□□□ -2.3
CEP290-203ENST00000547691 TRIM28Q13263 835 aaKnown RBP0.71□□□□□ -2.3
CEP290-203ENST00000547691 IFNLR1Q8IU57 520 aaPredicted RBP0.71□□□□□ -2.3
CEP290-203ENST00000547691 GMCL1Q96IK5 515 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 CAMKK2Q96RR4 588 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 SPSB2Q99619 263 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 GPR20Q99678 358 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 ADAM33Q9BZ11 813 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 ANGEL1Q9UNK9 670 aaKnown RBP0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms