RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 ABCC12Q96J65 1359 aa30.91■■■□□ 2.54
RBFOX1-209ENST00000547427 CACNA1FO60840 1977 aa30.9■■■□□ 2.54
RBFOX1-209ENST00000547427 SLC4A2P04920 1241 aa30.9■■■□□ 2.54
RBFOX1-209ENST00000547427 VAMP4O75379 141 aa30.89■■■□□ 2.54
RBFOX1-209ENST00000547427 NPR1P16066 1061 aa30.89■■■□□ 2.54
RBFOX1-209ENST00000547427 TRMT112Q9UI30 125 aaKnown RBP30.89■■■□□ 2.54
RBFOX1-209ENST00000547427 TNRC6CQ9HCJ0 1690 aaKnown RBP30.88■■■□□ 2.53
RBFOX1-209ENST00000547427 KLRG2A4D1S0 409 aaPredicted RBP30.88■■■□□ 2.53
RBFOX1-209ENST00000547427 ATP5J2-PTCD1G3V325 749 aa30.88■■■□□ 2.53
RBFOX1-209ENST00000547427 ZNF219Q9P2Y4 722 aaPredicted RBP30.88■■■□□ 2.53
RBFOX1-209ENST00000547427 RNF123Q5XPI4 1314 aa30.88■■■□□ 2.53
RBFOX1-209ENST00000547427 E9PSI1 815 aa30.87■■■□□ 2.53
RBFOX1-209ENST00000547427 ZNF428Q96B54 188 aa30.86■■■□□ 2.53
RBFOX1-209ENST00000547427 SLX4Q8IY92 1834 aa30.85■■■□□ 2.53
RBFOX1-209ENST00000547427 RIC1Q4ADV7 1423 aa30.85■■■□□ 2.53
RBFOX1-209ENST00000547427 RPGRQ92834 1020 aaKnown RBP30.85■■■□□ 2.53
RBFOX1-209ENST00000547427 MYD88Q99836 296 aa30.85■■■□□ 2.53
RBFOX1-209ENST00000547427 ISCA1Q9BUE6 129 aa30.85■■■□□ 2.53
RBFOX1-209ENST00000547427 PRPF40BQ6NWY9 871 aaKnown RBP30.84■■■□□ 2.53
RBFOX1-209ENST00000547427 NLRP3Q96P20 1036 aa30.84■■■□□ 2.53
RBFOX1-209ENST00000547427 SH3TC1Q8TE82 1336 aa30.83■■■□□ 2.53
RBFOX1-209ENST00000547427 C21orf2O43822 256 aa30.83■■■□□ 2.53
RBFOX1-209ENST00000547427 ALDH1B1P30837 517 aa30.83■■■□□ 2.53
RBFOX1-209ENST00000547427 MAP3K2Q9Y2U5 619 aa30.83■■■□□ 2.53
RBFOX1-209ENST00000547427 KSR2Q6VAB6 950 aa30.82■■■□□ 2.52
RBFOX1-209ENST00000547427 G2E3Q7L622 706 aa30.82■■■□□ 2.52
RBFOX1-209ENST00000547427 PI4KAP2A4QPH2 592 aa30.81■■■□□ 2.52
RBFOX1-209ENST00000547427 SLFN5Q08AF3 891 aa30.81■■■□□ 2.52
RBFOX1-209ENST00000547427 CRY2Q49AN0 593 aa30.81■■■□□ 2.52
RBFOX1-209ENST00000547427 SLC10A5Q5PT55 438 aa30.81■■■□□ 2.52
RBFOX1-209ENST00000547427 PI4KAP1Q8N8J0 262 aa30.81■■■□□ 2.52
RBFOX1-209ENST00000547427 ZNF784Q8NCA9 323 aaPredicted RBP30.81■■■□□ 2.52
RBFOX1-209ENST00000547427 METTL22Q9BUU2 404 aaPredicted RBP30.81■■■□□ 2.52
RBFOX1-209ENST00000547427 FLIIQ13045 1269 aa30.8■■■□□ 2.52
RBFOX1-209ENST00000547427 TRIM28Q13263 835 aaKnown RBP30.8■■■□□ 2.52
RBFOX1-209ENST00000547427 HCLS1P14317 486 aaPredicted RBP30.79■■■□□ 2.52
RBFOX1-209ENST00000547427 NEXNQ0ZGT2 675 aa30.79■■■□□ 2.52
RBFOX1-209ENST00000547427 FKBP5Q13451 457 aaPredicted RBP30.79■■■□□ 2.52
RBFOX1-209ENST00000547427 SYNE4Q8N205 404 aa30.79■■■□□ 2.52
RBFOX1-209ENST00000547427 RBM17Q96I25 401 aaKnown RBP30.79■■■□□ 2.52
RBFOX1-209ENST00000547427 SOGA3Q5TF21 947 aa30.78■■■□□ 2.52
RBFOX1-209ENST00000547427 FAM89AQ96GI7 184 aa30.78■■■□□ 2.52
RBFOX1-209ENST00000547427 CDCA7LQ96GN5 454 aa30.78■■■□□ 2.52
RBFOX1-209ENST00000547427 SBF1O95248 1867 aa30.78■■■□□ 2.52
RBFOX1-209ENST00000547427 LAMB2P55268 1798 aa30.77■■■□□ 2.52
RBFOX1-209ENST00000547427 RASSF7Q02833 373 aa30.77■■■□□ 2.52
RBFOX1-209ENST00000547427 RTL5Q5HYW3 569 aaPredicted RBP30.77■■■□□ 2.52
RBFOX1-209ENST00000547427 C9orf131Q5VYM1 1079 aa30.76■■■□□ 2.51
RBFOX1-209ENST00000547427 C3orf67Q6ZVT6 689 aa30.76■■■□□ 2.51
RBFOX1-209ENST00000547427 CCDC191Q8NCU4 936 aa30.76■■■□□ 2.51
RBFOX1-209ENST00000547427 ADCY9O60503 1353 aa30.76■■■□□ 2.51
RBFOX1-209ENST00000547427 CCDC88AQ3V6T2 1871 aa30.76■■■□□ 2.51
RBFOX1-209ENST00000547427 CWC25Q9NXE8 425 aaPredicted RBP30.75■■■□□ 2.51
RBFOX1-209ENST00000547427 RNF181Q9P0P0 153 aa30.75■■■□□ 2.51
RBFOX1-209ENST00000547427 FER1L6Q2WGJ9 1857 aa30.74■■■□□ 2.51
RBFOX1-209ENST00000547427 HOXA10P31260 410 aaPredicted RBP30.74■■■□□ 2.51
RBFOX1-209ENST00000547427 DDX60Q8IY21 1712 aaKnown RBP30.73■■■□□ 2.51
RBFOX1-209ENST00000547427 ZBTB38Q8NAP3 1195 aaPredicted RBP30.73■■■□□ 2.51
RBFOX1-209ENST00000547427 CRAMP1Q96RY5 1269 aa30.73■■■□□ 2.51
RBFOX1-209ENST00000547427 CCDC93Q567U6 631 aa30.72■■■□□ 2.51
RBFOX1-209ENST00000547427 NFKBIEO00221 500 aa30.71■■■□□ 2.51
RBFOX1-209ENST00000547427 IRS4O14654 1257 aaPredicted RBP30.71■■■□□ 2.51
RBFOX1-209ENST00000547427 HSP90B1P14625 803 aaKnown RBP30.71■■■□□ 2.51
RBFOX1-209ENST00000547427 LMNB1P20700 586 aa30.71■■■□□ 2.51
RBFOX1-209ENST00000547427 HNRNPUQ00839 825 aaKnown RBP eCLIP30.71■■■□□ 2.51
RBFOX1-209ENST00000547427 C7orf43Q8WVR3 580 aa30.7■■■□□ 2.51
RBFOX1-209ENST00000547427 DNAAF4Q8WXU2 420 aa30.7■■■□□ 2.51
RBFOX1-209ENST00000547427 PCCAP05165 728 aaPredicted RBP30.69■■■□□ 2.5
RBFOX1-209ENST00000547427 DDX46Q7L014 1031 aaKnown RBP30.69■■■□□ 2.5
RBFOX1-209ENST00000547427 ZNF526Q8TF50 670 aaPredicted RBP30.69■■■□□ 2.5
RBFOX1-209ENST00000547427 TAOK3Q9H2K8 898 aa30.69■■■□□ 2.5
RBFOX1-209ENST00000547427 IGKV5-2P06315 115 aa30.68■■■□□ 2.5
RBFOX1-209ENST00000547427 CWF19L2Q2TBE0 894 aaKnown RBP30.68■■■□□ 2.5
RBFOX1-209ENST00000547427 PPEF1O14829 653 aaPredicted RBP30.67■■■□□ 2.5
RBFOX1-209ENST00000547427 OLFM4Q6UX06 510 aa30.67■■■□□ 2.5
RBFOX1-209ENST00000547427 TRMT2AQ8IZ69 625 aaKnown RBP30.67■■■□□ 2.5
RBFOX1-209ENST00000547427 RTKN2Q8IZC4 609 aa30.67■■■□□ 2.5
RBFOX1-209ENST00000547427 TMX4Q9H1E5 349 aaPredicted RBP30.67■■■□□ 2.5
RBFOX1-209ENST00000547427 JARID2Q92833 1246 aaPredicted RBP30.66■■■□□ 2.5
RBFOX1-209ENST00000547427 GPBP1L1Q9HC44 474 aaPredicted RBP30.66■■■□□ 2.5
RBFOX1-209ENST00000547427 ABCC4O15439 1325 aa30.66■■■□□ 2.5
RBFOX1-209ENST00000547427 NEURL1BA8MQ27 555 aa30.65■■■□□ 2.5
RBFOX1-209ENST00000547427 LTBP3Q9NS15 1303 aa30.65■■■□□ 2.5
RBFOX1-209ENST00000547427 CC2D2BQ6DHV5 1058 aa30.64■■■□□ 2.5
RBFOX1-209ENST00000547427 TAF1P21675 1872 aa30.63■■■□□ 2.49
RBFOX1-209ENST00000547427 F6X3S4 739 aa30.63■■■□□ 2.49
RBFOX1-209ENST00000547427 SF3B3Q15393 1217 aaKnown RBP30.63■■■□□ 2.49
RBFOX1-209ENST00000547427 LINS1Q8NG48 757 aa30.63■■■□□ 2.49
RBFOX1-209ENST00000547427 DICER1Q9UPY3 1922 aaKnown RBP30.63■■■□□ 2.49
RBFOX1-209ENST00000547427 BBOX1O75936 387 aa30.62■■■□□ 2.49
RBFOX1-209ENST00000547427 PRELPP51888 382 aa30.62■■■□□ 2.49
RBFOX1-209ENST00000547427 FKBP4Q02790 459 aaKnown RBP eCLIP30.62■■■□□ 2.49
RBFOX1-209ENST00000547427 TIAM2Q8IVF5 1701 aa30.61■■■□□ 2.49
RBFOX1-209ENST00000547427 PDE8AO60658 829 aa30.61■■■□□ 2.49
RBFOX1-209ENST00000547427 GRAPQ13588 217 aa30.61■■■□□ 2.49
RBFOX1-209ENST00000547427 MRPL50Q8N5N7 158 aaKnown RBP30.61■■■□□ 2.49
RBFOX1-209ENST00000547427 GRAPLQ8TC17 118 aaPredicted RBP30.61■■■□□ 2.49
RBFOX1-209ENST00000547427 SSH1Q8WYL5 1049 aa30.61■■■□□ 2.49
RBFOX1-209ENST00000547427 CT47B1P0C2W7 299 aaPredicted RBP30.6■■■□□ 2.49
RBFOX1-209ENST00000547427 GCKRQ14397 625 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms