RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-204ENST00000547310 ZNF417Q8TAU3 575 aa8.83□□□□□ -1
LGR5-204ENST00000547310 TP53INP1Q96A56 240 aa8.83□□□□□ -1
LGR5-204ENST00000547310 ARXQ96QS3 562 aa8.83□□□□□ -1
LGR5-204ENST00000547310 ZNF587Q96SQ5 575 aaPredicted RBP8.83□□□□□ -1
LGR5-204ENST00000547310 SSBP4Q9BWG4 385 aaPredicted RBP8.83□□□□□ -1
LGR5-204ENST00000547310 ZNF358Q9NW07 568 aa8.83□□□□□ -1
LGR5-204ENST00000547310 STAU1O95793 577 aaKnown RBP8.82□□□□□ -1
LGR5-204ENST00000547310 FAM157BP0CG42 384 aa8.82□□□□□ -1
LGR5-204ENST00000547310 NID1P14543 1247 aa8.82□□□□□ -1
LGR5-204ENST00000547310 ATP4AP20648 1035 aa8.82□□□□□ -1
LGR5-204ENST00000547310 SMTNP53814 917 aa8.82□□□□□ -1
LGR5-204ENST00000547310 PSME1Q06323 249 aa8.82□□□□□ -1
LGR5-204ENST00000547310 LAMC2Q13753 1193 aa8.82□□□□□ -1
LGR5-204ENST00000547310 ANKMY2Q8IV38 441 aa8.82□□□□□ -1
LGR5-204ENST00000547310 KHNYNO15037 678 aaKnown RBP8.81□□□□□ -1
LGR5-204ENST00000547310 IRAK1P51617 712 aa8.81□□□□□ -1
LGR5-204ENST00000547310 EPHA4P54764 986 aa8.81□□□□□ -1
LGR5-204ENST00000547310 SEC13P55735 322 aa8.81□□□□□ -1
LGR5-204ENST00000547310 MICALL1Q8N3F8 863 aa8.81□□□□□ -1
LGR5-204ENST00000547310 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.81□□□□□ -1
LGR5-204ENST00000547310 ZNF594Q96JF6 807 aaPredicted RBP8.81□□□□□ -1
LGR5-204ENST00000547310 CDK2AP1O14519 115 aa8.8□□□□□ -1
LGR5-204ENST00000547310 SIN3BO75182 1162 aa8.8□□□□□ -1
LGR5-204ENST00000547310 MARK1Q9P0L2 795 aa8.8□□□□□ -1
LGR5-204ENST00000547310 STARD13Q9Y3M8 1113 aa8.8□□□□□ -1
LGR5-204ENST00000547310 RBM19Q9Y4C8 960 aaKnown RBP8.8□□□□□ -1
LGR5-204ENST00000547310 A0A1W2PNR3 127 aa8.79□□□□□ -1
LGR5-204ENST00000547310 A6NJY4 79 aa8.79□□□□□ -1
LGR5-204ENST00000547310 DPYDQ12882 1025 aa8.79□□□□□ -1
LGR5-204ENST00000547310 TLR1Q15399 786 aa8.79□□□□□ -1
LGR5-204ENST00000547310 SLC51AQ86UW1 340 aa8.79□□□□□ -1
LGR5-204ENST00000547310 PCMTD2Q9NV79 361 aa8.79□□□□□ -1
LGR5-204ENST00000547310 IQSEC3Q9UPP2 1182 aaPredicted RBP8.79□□□□□ -1
LGR5-204ENST00000547310 CDCA8Q53HL2 280 aa8.78□□□□□ -1
LGR5-204ENST00000547310 SYT9Q86SS6 491 aa8.78□□□□□ -1
LGR5-204ENST00000547310 ZNF295-AS1Q8N0V1 137 aa8.78□□□□□ -1
LGR5-204ENST00000547310 SCHIP1Q9P0W5 487 aaPredicted RBP8.78□□□□□ -1
LGR5-204ENST00000547310 NOVA2Q9UNW9 492 aaKnown RBP8.78□□□□□ -1
LGR5-204ENST00000547310 RNF114Q9Y508 228 aa8.78□□□□□ -1
LGR5-204ENST00000547310 TAL1P17542 331 aaPredicted RBP8.77□□□□□ -1.01
LGR5-204ENST00000547310 SAMD5Q5TGI4 173 aa8.77□□□□□ -1.01
LGR5-204ENST00000547310 FAM200AQ8TCP9 573 aa8.77□□□□□ -1.01
LGR5-204ENST00000547310 SERTAD1Q9UHV2 236 aa8.77□□□□□ -1.01
LGR5-204ENST00000547310 ZMIZ1Q9ULJ6 1067 aa8.77□□□□□ -1.01
LGR5-204ENST00000547310 SFI1A8K8P3 1242 aa8.76□□□□□ -1.01
LGR5-204ENST00000547310 EFSO43281 561 aa8.76□□□□□ -1.01
LGR5-204ENST00000547310 PLA2G4AP47712 749 aa8.76□□□□□ -1.01
LGR5-204ENST00000547310 TNFRSF25Q93038 417 aa8.76□□□□□ -1.01
LGR5-204ENST00000547310 ALBP02768 609 aa8.75□□□□□ -1.01
LGR5-204ENST00000547310 SWI5Q1ZZU3 235 aa8.75□□□□□ -1.01
LGR5-204ENST00000547310 ACIN1Q9UKV3 1341 aaKnown RBP8.75□□□□□ -1.01
LGR5-204ENST00000547310 FAM69CQ0P6D2 419 aa8.74□□□□□ -1.01
LGR5-204ENST00000547310 TRAPPC3LQ5T215 181 aa8.74□□□□□ -1.01
LGR5-204ENST00000547310 POTEAQ6S8J7 498 aa8.74□□□□□ -1.01
LGR5-204ENST00000547310 C20orf204Q6ZNR8 217 aa8.74□□□□□ -1.01
LGR5-204ENST00000547310 C8orf86Q6ZUL3 223 aa8.74□□□□□ -1.01
LGR5-204ENST00000547310 TNS4Q8IZW8 715 aa8.74□□□□□ -1.01
LGR5-204ENST00000547310 TSEN2Q8NCE0 465 aaKnown RBP8.74□□□□□ -1.01
LGR5-204ENST00000547310 GAS2L2Q8NHY3 880 aa8.74□□□□□ -1.01
LGR5-204ENST00000547310 STRN4Q9NRL3 753 aa8.74□□□□□ -1.01
LGR5-204ENST00000547310 ARSJQ5FYB0 599 aaPredicted RBP8.73□□□□□ -1.01
LGR5-204ENST00000547310 STAG2Q8N3U4 1231 aa8.73□□□□□ -1.01
LGR5-204ENST00000547310 ARID3AQ99856 593 aa8.73□□□□□ -1.01
LGR5-204ENST00000547310 NIFKQ9BYG3 293 aaKnown RBP8.73□□□□□ -1.01
LGR5-204ENST00000547310 A0A0A0MRY4 1105 aa8.72□□□□□ -1.01
LGR5-204ENST00000547310 TEAD4Q15561 434 aa8.72□□□□□ -1.01
LGR5-204ENST00000547310 STK32AQ8WU08 396 aa8.72□□□□□ -1.01
LGR5-204ENST00000547310 AIDAQ96BJ3 306 aa8.72□□□□□ -1.01
LGR5-204ENST00000547310 USP3Q9Y6I4 520 aa8.72□□□□□ -1.01
LGR5-204ENST00000547310 HIRAP54198 1017 aaPredicted RBP8.71□□□□□ -1.02
LGR5-204ENST00000547310 TMEM164Q5U3C3 297 aa8.71□□□□□ -1.02
LGR5-204ENST00000547310 SLC9A9Q8IVB4 645 aa8.71□□□□□ -1.02
LGR5-204ENST00000547310 ZIC5Q96T25 663 aa8.71□□□□□ -1.02
LGR5-204ENST00000547310 C21orf2O43822 256 aa8.7□□□□□ -1.02
LGR5-204ENST00000547310 IGFBP4P22692 258 aa8.7□□□□□ -1.02
LGR5-204ENST00000547310 WEE1P30291 646 aa8.7□□□□□ -1.02
LGR5-204ENST00000547310 CD97P48960 835 aa8.7□□□□□ -1.02
LGR5-204ENST00000547310 KRTAP4-11Q9BYQ6 195 aa8.7□□□□□ -1.02
LGR5-204ENST00000547310 TSPAN10Q9H1Z9 355 aaPredicted RBP8.7□□□□□ -1.02
LGR5-204ENST00000547310 ZDHHC3Q9NYG2 299 aa8.7□□□□□ -1.02
LGR5-204ENST00000547310 PSMA6P60900 246 aaKnown RBP8.69□□□□□ -1.02
LGR5-204ENST00000547310 CLP1Q92989 425 aaKnown RBP8.69□□□□□ -1.02
LGR5-204ENST00000547310 HINFPQ9BQA5 517 aa8.69□□□□□ -1.02
LGR5-204ENST00000547310 ATAD2Q6PL18 1390 aa8.69□□□□□ -1.02
LGR5-204ENST00000547310 TMEM88BA6NKF7 163 aa8.68□□□□□ -1.02
LGR5-204ENST00000547310 RAC1P63000 192 aa8.68□□□□□ -1.02
LGR5-204ENST00000547310 NBPF1Q3BBV0 1214 aa8.68□□□□□ -1.02
LGR5-204ENST00000547310 SHISA2Q6UWI4 295 aa8.68□□□□□ -1.02
LGR5-204ENST00000547310 USTQ9Y2C2 406 aa8.68□□□□□ -1.02
LGR5-204ENST00000547310 EML1O00423 815 aa8.67□□□□□ -1.02
LGR5-204ENST00000547310 TATP17735 454 aaPredicted RBP8.67□□□□□ -1.02
LGR5-204ENST00000547310 NOS2P35228 1153 aa8.67□□□□□ -1.02
LGR5-204ENST00000547310 JAG1P78504 1218 aa8.67□□□□□ -1.02
LGR5-204ENST00000547310 ILDR2Q71H61 639 aa8.67□□□□□ -1.02
LGR5-204ENST00000547310 ZDHHC1Q8WTX9 485 aa8.67□□□□□ -1.02
LGR5-204ENST00000547310 CABP1Q9NZU7 370 aa8.67□□□□□ -1.02
LGR5-204ENST00000547310 GJA3Q9Y6H8 435 aa8.67□□□□□ -1.02
LGR5-204ENST00000547310 OAS3Q9Y6K5 1087 aaKnown RBP8.67□□□□□ -1.02
LGR5-204ENST00000547310 SERTM1A2A2V5 107 aa8.66□□□□□ -1.02
LGR5-204ENST00000547310 FOXO3O43524 673 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms