RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 CWF19L2Q2TBE0 894 aaKnown RBP29.39■■■□□ 2.29
SMARCD1-203ENST00000547247 CWC25Q9NXE8 425 aaPredicted RBP29.39■■■□□ 2.29
SMARCD1-203ENST00000547247 NRXN2Q9P2S2 1712 aa29.38■■■□□ 2.29
SMARCD1-203ENST00000547247 NTSR2O95665 410 aa29.38■■■□□ 2.29
SMARCD1-203ENST00000547247 TRIM27P14373 513 aa29.38■■■□□ 2.29
SMARCD1-203ENST00000547247 GTF2E1P29083 439 aaPredicted RBP29.38■■■□□ 2.29
SMARCD1-203ENST00000547247 PRR5LQ6MZQ0 368 aa29.38■■■□□ 2.29
SMARCD1-203ENST00000547247 SRCIN1Q9C0H9 1055 aa29.37■■■□□ 2.29
SMARCD1-203ENST00000547247 TRMT112Q9UI30 125 aaKnown RBP29.37■■■□□ 2.29
SMARCD1-203ENST00000547247 PXDNLA1KZ92 1463 aa29.35■■■□□ 2.29
SMARCD1-203ENST00000547247 ST5P78524 1137 aa29.35■■■□□ 2.29
SMARCD1-203ENST00000547247 SYT17Q9BSW7 474 aa29.35■■■□□ 2.29
SMARCD1-203ENST00000547247 RNF123Q5XPI4 1314 aa29.35■■■□□ 2.29
SMARCD1-203ENST00000547247 NUTM1Q86Y26 1132 aa29.35■■■□□ 2.29
SMARCD1-203ENST00000547247 ALDH1L1O75891 902 aa29.34■■■□□ 2.29
SMARCD1-203ENST00000547247 GCKRQ14397 625 aa29.33■■■□□ 2.29
SMARCD1-203ENST00000547247 CCDC24Q8N4L8 307 aa29.33■■■□□ 2.29
SMARCD1-203ENST00000547247 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.33■■■□□ 2.29
SMARCD1-203ENST00000547247 CLUAP1Q96AJ1 413 aa29.33■■■□□ 2.29
SMARCD1-203ENST00000547247 ABCC4O15439 1325 aa29.33■■■□□ 2.29
SMARCD1-203ENST00000547247 CCT4P50991 539 aaKnown RBP29.32■■■□□ 2.28
SMARCD1-203ENST00000547247 ERFEQ4G0M1 354 aa29.32■■■□□ 2.28
SMARCD1-203ENST00000547247 ZBTB38Q8NAP3 1195 aaPredicted RBP29.32■■■□□ 2.28
SMARCD1-203ENST00000547247 TNNQ9UQP3 1299 aa29.32■■■□□ 2.28
SMARCD1-203ENST00000547247 SH3TC1Q8TE82 1336 aa29.32■■■□□ 2.28
SMARCD1-203ENST00000547247 C10orf71Q711Q0 1435 aa29.32■■■□□ 2.28
SMARCD1-203ENST00000547247 FAM89AQ96GI7 184 aa29.31■■■□□ 2.28
SMARCD1-203ENST00000547247 CD2APQ9Y5K6 639 aa29.31■■■□□ 2.28
SMARCD1-203ENST00000547247 PCCAP05165 728 aaPredicted RBP29.3■■■□□ 2.28
SMARCD1-203ENST00000547247 FTSJ3Q8IY81 847 aaKnown RBP29.3■■■□□ 2.28
SMARCD1-203ENST00000547247 DZIP1LQ8IYY4 767 aaKnown RBP29.3■■■□□ 2.28
SMARCD1-203ENST00000547247 BRIP1Q9BX63 1249 aa29.3■■■□□ 2.28
SMARCD1-203ENST00000547247 PLIN1O60240 522 aa29.29■■■□□ 2.28
SMARCD1-203ENST00000547247 MS4A1P11836 297 aa29.29■■■□□ 2.28
SMARCD1-203ENST00000547247 RTL5Q5HYW3 569 aaPredicted RBP29.29■■■□□ 2.28
SMARCD1-203ENST00000547247 INTS3Q68E01 1043 aaKnown RBP29.29■■■□□ 2.28
SMARCD1-203ENST00000547247 SYNE4Q8N205 404 aa29.29■■■□□ 2.28
SMARCD1-203ENST00000547247 ABCC12Q96J65 1359 aa29.28■■■□□ 2.28
SMARCD1-203ENST00000547247 SLC10A5Q5PT55 438 aa29.27■■■□□ 2.28
SMARCD1-203ENST00000547247 C9orf78Q9NZ63 289 aaPredicted RBP29.27■■■□□ 2.28
SMARCD1-203ENST00000547247 KIF13BQ9NQT8 1826 aa29.27■■■□□ 2.28
SMARCD1-203ENST00000547247 H7C1W4 665 aa29.26■■■□□ 2.28
SMARCD1-203ENST00000547247 JARID2Q92833 1246 aaPredicted RBP29.26■■■□□ 2.28
SMARCD1-203ENST00000547247 GRM8O00222 908 aa29.26■■■□□ 2.27
SMARCD1-203ENST00000547247 PDE6BP35913 854 aa29.26■■■□□ 2.27
SMARCD1-203ENST00000547247 UBE3BQ7Z3V4 1068 aa29.26■■■□□ 2.27
SMARCD1-203ENST00000547247 NLGN2Q8NFZ4 835 aa29.26■■■□□ 2.27
SMARCD1-203ENST00000547247 N4BP2Q86UW6 1770 aaPredicted RBP29.25■■■□□ 2.27
SMARCD1-203ENST00000547247 IRS4O14654 1257 aaPredicted RBP29.25■■■□□ 2.27
SMARCD1-203ENST00000547247 HSP90B1P14625 803 aaKnown RBP29.25■■■□□ 2.27
SMARCD1-203ENST00000547247 RIC1Q4ADV7 1423 aa29.25■■■□□ 2.27
SMARCD1-203ENST00000547247 CDHR2Q9BYE9 1310 aa29.24■■■□□ 2.27
SMARCD1-203ENST00000547247 HCLS1P14317 486 aaPredicted RBP29.24■■■□□ 2.27
SMARCD1-203ENST00000547247 TGFB2P61812 414 aa29.24■■■□□ 2.27
SMARCD1-203ENST00000547247 TMEM57Q8N5G2 664 aa29.24■■■□□ 2.27
SMARCD1-203ENST00000547247 RLBP1P12271 317 aa29.23■■■□□ 2.27
SMARCD1-203ENST00000547247 ANKRD31Q8N7Z5 1873 aa29.22■■■□□ 2.27
SMARCD1-203ENST00000547247 RRP1P56182 461 aaKnown RBP29.22■■■□□ 2.27
SMARCD1-203ENST00000547247 NLRP3Q96P20 1036 aa29.22■■■□□ 2.27
SMARCD1-203ENST00000547247 PDZRN3Q9UPQ7 1066 aa29.22■■■□□ 2.27
SMARCD1-203ENST00000547247 CASP7P55210 303 aa29.22■■■□□ 2.27
SMARCD1-203ENST00000547247 PANK1Q8TE04 598 aa29.22■■■□□ 2.27
SMARCD1-203ENST00000547247 USP44Q9H0E7 712 aa29.22■■■□□ 2.27
SMARCD1-203ENST00000547247 KLRG2A4D1S0 409 aaPredicted RBP29.21■■■□□ 2.27
SMARCD1-203ENST00000547247 UTYO14607 1347 aa29.2■■■□□ 2.27
SMARCD1-203ENST00000547247 PDE3AQ14432 1141 aa29.2■■■□□ 2.26
SMARCD1-203ENST00000547247 H0YIN7 160 aa29.19■■■□□ 2.26
SMARCD1-203ENST00000547247 PDE8AO60658 829 aa29.19■■■□□ 2.26
SMARCD1-203ENST00000547247 NBPF7P0C2Y1 421 aaPredicted RBP29.19■■■□□ 2.26
SMARCD1-203ENST00000547247 KIAA1551Q9HCM1 1747 aa29.19■■■□□ 2.26
SMARCD1-203ENST00000547247 C2CD5Q86YS7 1000 aa29.18■■■□□ 2.26
SMARCD1-203ENST00000547247 ITPRIPQ8IWB1 547 aa29.18■■■□□ 2.26
SMARCD1-203ENST00000547247 A0A0G2JLW4 131 aa29.18■■■□□ 2.26
SMARCD1-203ENST00000547247 CHRNA5P30532 468 aa29.18■■■□□ 2.26
SMARCD1-203ENST00000547247 DDX60Q8IY21 1712 aaKnown RBP29.18■■■□□ 2.26
SMARCD1-203ENST00000547247 TNRC6CQ9HCJ0 1690 aaKnown RBP29.17■■■□□ 2.26
SMARCD1-203ENST00000547247 DPEP1P16444 411 aa29.17■■■□□ 2.26
SMARCD1-203ENST00000547247 C3orf67Q6ZVT6 689 aa29.17■■■□□ 2.26
SMARCD1-203ENST00000547247 PLA2G12BQ9BX93 195 aa29.17■■■□□ 2.26
SMARCD1-203ENST00000547247 LAMB2P55268 1798 aa29.16■■■□□ 2.26
SMARCD1-203ENST00000547247 SRGNP10124 158 aa29.16■■■□□ 2.26
SMARCD1-203ENST00000547247 CRY2Q49AN0 593 aa29.16■■■□□ 2.26
SMARCD1-203ENST00000547247 SUPT16HQ9Y5B9 1047 aaKnown RBP29.16■■■□□ 2.26
SMARCD1-203ENST00000547247 C20orf194Q5TEA3 1177 aa29.15■■■□□ 2.26
SMARCD1-203ENST00000547247 UBTFL1P0CB47 393 aaPredicted RBP29.14■■■□□ 2.26
SMARCD1-203ENST00000547247 SF3B3Q15393 1217 aaKnown RBP29.14■■■□□ 2.26
SMARCD1-203ENST00000547247 MEIS3Q99687 375 aa29.14■■■□□ 2.26
SMARCD1-203ENST00000547247 GNAI3P08754 354 aa29.13■■■□□ 2.25
SMARCD1-203ENST00000547247 RPGRQ92834 1020 aaKnown RBP29.13■■■□□ 2.25
SMARCD1-203ENST00000547247 MASTLQ96GX5 879 aa29.13■■■□□ 2.25
SMARCD1-203ENST00000547247 COG6Q9Y2V7 657 aa29.13■■■□□ 2.25
SMARCD1-203ENST00000547247 GOLGB1Q14789 3259 aaKnown RBP29.13■■■□□ 2.25
SMARCD1-203ENST00000547247 CENPBP07199 599 aaPredicted RBP29.13■■■□□ 2.25
SMARCD1-203ENST00000547247 NPR1P16066 1061 aa29.13■■■□□ 2.25
SMARCD1-203ENST00000547247 KCNA3P22001 575 aa29.13■■■□□ 2.25
SMARCD1-203ENST00000547247 CTSWP56202 376 aa29.13■■■□□ 2.25
SMARCD1-203ENST00000547247 MVPQ14764 893 aaKnown RBP29.13■■■□□ 2.25
SMARCD1-203ENST00000547247 SUCLG2Q96I99 432 aa29.13■■■□□ 2.25
SMARCD1-203ENST00000547247 HDAC5Q9UQL6 1122 aa29.13■■■□□ 2.25
SMARCD1-203ENST00000547247 DCAF8L1A6NGE4 600 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms