RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 FKBP4Q02790 459 aaKnown RBP eCLIP15.35■□□□□ 0.05
SCAF11-209ENST00000547018 ERC1Q8IUD2 1116 aa15.35■□□□□ 0.05
SCAF11-209ENST00000547018 SMIM5Q71RC9 77 aa15.35■□□□□ 0.05
SCAF11-209ENST00000547018 PIGBQ92521 554 aa15.35■□□□□ 0.05
SCAF11-209ENST00000547018 LRRC2Q9BYS8 371 aa15.35■□□□□ 0.05
SCAF11-209ENST00000547018 A0A0D9SFI3 127 aa15.35■□□□□ 0.05
SCAF11-209ENST00000547018 PRIM1P49642 420 aaKnown RBP15.35■□□□□ 0.05
SCAF11-209ENST00000547018 ZNF142P52746 1687 aaPredicted RBP15.34■□□□□ 0.05
SCAF11-209ENST00000547018 FGD1P98174 961 aa15.34■□□□□ 0.05
SCAF11-209ENST00000547018 CWC25Q9NXE8 425 aaPredicted RBP15.34■□□□□ 0.05
SCAF11-209ENST00000547018 DBNLQ9UJU6 430 aaKnown RBP15.34■□□□□ 0.05
SCAF11-209ENST00000547018 SNX14Q9Y5W7 946 aa15.34■□□□□ 0.05
SCAF11-209ENST00000547018 TAF6LQ9Y6J9 622 aa15.34■□□□□ 0.05
SCAF11-209ENST00000547018 GOLIM4O00461 696 aa15.34■□□□□ 0.05
SCAF11-209ENST00000547018 CCDC83Q8IWF9 413 aa15.34■□□□□ 0.05
SCAF11-209ENST00000547018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.34■□□□□ 0.052e-7■■■■□ 19.9
SCAF11-209ENST00000547018 PTPN12Q05209 780 aaKnown RBP15.34■□□□□ 0.05
SCAF11-209ENST00000547018 PLBD2Q8NHP8 589 aa15.34■□□□□ 0.05
SCAF11-209ENST00000547018 FAM182BQ5T319 152 aa15.33■□□□□ 0.04
SCAF11-209ENST00000547018 RUFY2Q8WXA3 655 aa15.33■□□□□ 0.04
SCAF11-209ENST00000547018 AK2P54819 239 aa15.33■□□□□ 0.04
SCAF11-209ENST00000547018 FAM208AQ9UK61 1670 aaKnown RBP15.33■□□□□ 0.04
SCAF11-209ENST00000547018 STRCP1A6NGW2 1772 aa15.32■□□□□ 0.04
SCAF11-209ENST00000547018 ZNF589Q86UQ0 364 aaPredicted RBP15.32■□□□□ 0.04
SCAF11-209ENST00000547018 HELBQ8NG08 1087 aaPredicted RBP15.32■□□□□ 0.04
SCAF11-209ENST00000547018 CARD10Q9BWT7 1032 aa15.32■□□□□ 0.04
SCAF11-209ENST00000547018 RBM8AQ9Y5S9 174 aaKnown RBP15.32■□□□□ 0.04
SCAF11-209ENST00000547018 CAMTA1Q9Y6Y1 1673 aa15.32■□□□□ 0.04
SCAF11-209ENST00000547018 EXOC5O00471 708 aa15.32■□□□□ 0.04
SCAF11-209ENST00000547018 XRCC6P12956 609 aaKnown RBP eCLIP15.32■□□□□ 0.04
SCAF11-209ENST00000547018 SLIT3O75094 1523 aa15.31■□□□□ 0.04
SCAF11-209ENST00000547018 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.31■□□□□ 0.04
SCAF11-209ENST00000547018 VPS37CA5D8V6 355 aaPredicted RBP15.31■□□□□ 0.04
SCAF11-209ENST00000547018 NUCB2P80303 420 aa15.31■□□□□ 0.04
SCAF11-209ENST00000547018 TNNI3KQ59H18 835 aa15.31■□□□□ 0.04
SCAF11-209ENST00000547018 FERMT3Q86UX7 667 aa15.31■□□□□ 0.04
SCAF11-209ENST00000547018 EVI5LQ96CN4 794 aa15.31■□□□□ 0.04
SCAF11-209ENST00000547018 LSG1Q9H089 658 aaKnown RBP15.31■□□□□ 0.04
SCAF11-209ENST00000547018 FPGT-TNNI3KV9GXZ4 949 aa15.31■□□□□ 0.04
SCAF11-209ENST00000547018 SOS2Q07890 1332 aaPredicted RBP15.31■□□□□ 0.04
SCAF11-209ENST00000547018 NCAPD2Q15021 1401 aa15.31■□□□□ 0.04
SCAF11-209ENST00000547018 CIZ1Q9ULV3 898 aaPredicted RBP15.31■□□□□ 0.04
SCAF11-209ENST00000547018 HEG1Q9ULI3 1381 aa15.31■□□□□ 0.04
SCAF11-209ENST00000547018 LARGE1O95461 756 aa15.3■□□□□ 0.04
SCAF11-209ENST00000547018 ZKSCAN1P17029 563 aaPredicted RBP15.3■□□□□ 0.04
SCAF11-209ENST00000547018 HLFQ16534 295 aa15.3■□□□□ 0.04
SCAF11-209ENST00000547018 CCDC57Q2TAC2 916 aa15.3■□□□□ 0.04
SCAF11-209ENST00000547018 SNAP23O00161 211 aa15.3■□□□□ 0.04
SCAF11-209ENST00000547018 KDM4AO75164 1064 aa15.3■□□□□ 0.04
SCAF11-209ENST00000547018 KIF6Q6ZMV9 814 aa15.3■□□□□ 0.04
SCAF11-209ENST00000547018 GAS2L3Q86XJ1 694 aa15.3■□□□□ 0.04
SCAF11-209ENST00000547018 HSPA4P34932 840 aa15.3■□□□□ 0.04
SCAF11-209ENST00000547018 DDIT3P35638 169 aa15.3■□□□□ 0.04
SCAF11-209ENST00000547018 MTX1Q13505 466 aa15.29■□□□□ 0.04
SCAF11-209ENST00000547018 PI16Q6UXB8 463 aa15.29■□□□□ 0.04
SCAF11-209ENST00000547018 PDRG1Q9NUG6 133 aa15.29■□□□□ 0.04
SCAF11-209ENST00000547018 ZDHHC9Q9Y397 364 aa15.29■□□□□ 0.04
SCAF11-209ENST00000547018 TTC41PQ6P2S7 1318 aa15.29■□□□□ 0.04
SCAF11-209ENST00000547018 CHST3Q7LGC8 479 aa15.29■□□□□ 0.04
SCAF11-209ENST00000547018 STK11IPQ8N1F8 1099 aa15.29■□□□□ 0.04
SCAF11-209ENST00000547018 RNF214Q8ND24 703 aa15.29■□□□□ 0.04
SCAF11-209ENST00000547018 RAD50Q92878 1312 aa15.29■□□□□ 0.04
SCAF11-209ENST00000547018 ZBTB1Q9Y2K1 713 aa15.29■□□□□ 0.04
SCAF11-209ENST00000547018 HSP90B1P14625 803 aaKnown RBP15.28■□□□□ 0.04
SCAF11-209ENST00000547018 WASHC4Q2M389 1173 aa15.28■□□□□ 0.04
SCAF11-209ENST00000547018 BICDL1Q6ZP65 573 aa15.28■□□□□ 0.04
SCAF11-209ENST00000547018 UBE2Q2Q8WVN8 375 aa15.28■□□□□ 0.04
SCAF11-209ENST00000547018 LRP10Q7Z4F1 713 aa15.28■□□□□ 0.04
SCAF11-209ENST00000547018 NSFL1CQ9UNZ2 370 aaKnown RBP15.28■□□□□ 0.04
SCAF11-209ENST00000547018 SMC3Q9UQE7 1217 aa15.28■□□□□ 0.04
SCAF11-209ENST00000547018 ERVV-2B6SEH9 535 aa15.28■□□□□ 0.04
SCAF11-209ENST00000547018 STARD3NLO95772 234 aa15.28■□□□□ 0.04
SCAF11-209ENST00000547018 MPNDQ8N594 471 aa15.28■□□□□ 0.04
SCAF11-209ENST00000547018 TRMT112Q9UI30 125 aaKnown RBP15.28■□□□□ 0.04
SCAF11-209ENST00000547018 CYP46A1Q9Y6A2 500 aa15.28■□□□□ 0.04
SCAF11-209ENST00000547018 LRRC37A3O60309 1634 aa15.28■□□□□ 0.04
SCAF11-209ENST00000547018 ATG3Q9NT62 314 aa15.27■□□□□ 0.04
SCAF11-209ENST00000547018 FIBPO43427 364 aa15.27■□□□□ 0.03
SCAF11-209ENST00000547018 FAM173BQ6P4H8 233 aa15.27■□□□□ 0.03
SCAF11-209ENST00000547018 RAB11FIP4Q86YS3 637 aa15.27■□□□□ 0.03
SCAF11-209ENST00000547018 LMTK3Q96Q04 1460 aa15.27■□□□□ 0.03
SCAF11-209ENST00000547018 CACNA1FO60840 1977 aa15.27■□□□□ 0.03
SCAF11-209ENST00000547018 ADORA1P30542 326 aa15.27■□□□□ 0.03
SCAF11-209ENST00000547018 HAND2P61296 217 aa15.27■□□□□ 0.03
SCAF11-209ENST00000547018 CREB3L3Q68CJ9 461 aa15.27■□□□□ 0.03
SCAF11-209ENST00000547018 RUFY3Q7L099 469 aa15.27■□□□□ 0.03
SCAF11-209ENST00000547018 CCDC24Q8N4L8 307 aa15.27■□□□□ 0.03
SCAF11-209ENST00000547018 CEP126Q9P2H0 1117 aa15.27■□□□□ 0.03
SCAF11-209ENST00000547018 HCLS1P14317 486 aaPredicted RBP15.26■□□□□ 0.03
SCAF11-209ENST00000547018 CNNM1Q9NRU3 951 aa15.26■□□□□ 0.03
SCAF11-209ENST00000547018 CCDC171Q6TFL3 1326 aa15.26■□□□□ 0.03
SCAF11-209ENST00000547018 DDX11Q96FC9 970 aa15.26■□□□□ 0.03
SCAF11-209ENST00000547018 TRPM3Q9HCF6 1732 aaPredicted RBP15.26■□□□□ 0.03
SCAF11-209ENST00000547018 A0A0G2JLW4 131 aa15.25■□□□□ 0.03
SCAF11-209ENST00000547018 A0A1B0GUL7 405 aa15.25■□□□□ 0.03
SCAF11-209ENST00000547018 IFIT1P09914 478 aaKnown RBP15.25■□□□□ 0.03
SCAF11-209ENST00000547018 L1TD1Q5T7N2 865 aaKnown RBP15.25■□□□□ 0.03
SCAF11-209ENST00000547018 FOXO4P98177 505 aa15.25■□□□□ 0.03
SCAF11-209ENST00000547018 VPS53Q5VIR6 699 aa15.25■□□□□ 0.03
SCAF11-209ENST00000547018 PXDNLA1KZ92 1463 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms