RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 CRY2Q49AN0 593 aa19.07■□□□□ 0.64
CCDC38-205ENST00000546947 SOGA3Q5TF21 947 aa19.07■□□□□ 0.64
CCDC38-205ENST00000546947 TSPYL6Q8N831 410 aa19.07■□□□□ 0.64
CCDC38-205ENST00000546947 GPBP1L1Q9HC44 474 aaPredicted RBP19.07■□□□□ 0.64
CCDC38-205ENST00000546947 RNF181Q9P0P0 153 aa19.07■□□□□ 0.64
CCDC38-205ENST00000546947 DICER1Q9UPY3 1922 aaKnown RBP19.06■□□□□ 0.64
CCDC38-205ENST00000546947 ALDH1B1P30837 517 aa19.06■□□□□ 0.64
CCDC38-205ENST00000546947 NLRP10Q86W26 655 aa19.06■□□□□ 0.64
CCDC38-205ENST00000546947 CACNA1FO60840 1977 aa19.06■□□□□ 0.64
CCDC38-205ENST00000546947 NFKBIEO00221 500 aa19.05■□□□□ 0.64
CCDC38-205ENST00000546947 LMNB1P20700 586 aa19.05■□□□□ 0.64
CCDC38-205ENST00000546947 GOLGA2Q08379 1002 aa19.05■□□□□ 0.64
CCDC38-205ENST00000546947 TWISTNBQ3B726 338 aaPredicted RBP19.05■□□□□ 0.64
CCDC38-205ENST00000546947 ZNF219Q9P2Y4 722 aaPredicted RBP19.05■□□□□ 0.64
CCDC38-205ENST00000546947 FANCIQ9NVI1 1328 aa19.04■□□□□ 0.64
CCDC38-205ENST00000546947 LAMB2P55268 1798 aa19.04■□□□□ 0.64
CCDC38-205ENST00000546947 SLC10A5Q5PT55 438 aa19.04■□□□□ 0.64
CCDC38-205ENST00000546947 TIAM2Q8IVF5 1701 aa19.04■□□□□ 0.64
CCDC38-205ENST00000546947 ZNF526Q8TF50 670 aaPredicted RBP19.04■□□□□ 0.64
CCDC38-205ENST00000546947 NLRP3Q96P20 1036 aa19.04■□□□□ 0.64
CCDC38-205ENST00000546947 PHAXQ9H814 394 aaKnown RBP19.04■□□□□ 0.64
CCDC38-205ENST00000546947 LTBP3Q9NS15 1303 aa19.03■□□□□ 0.64
CCDC38-205ENST00000546947 ZC3H4Q9UPT8 1303 aaKnown RBP19.03■□□□□ 0.64
CCDC38-205ENST00000546947 RIC3Q7Z5B4 369 aa19.03■□□□□ 0.64
CCDC38-205ENST00000546947 C7orf43Q8WVR3 580 aa19.03■□□□□ 0.64
CCDC38-205ENST00000546947 RPGRQ92834 1020 aaKnown RBP19.03■□□□□ 0.64
CCDC38-205ENST00000546947 ISCA1Q9BUE6 129 aa19.03■□□□□ 0.64
CCDC38-205ENST00000546947 CCER2I3L3R5 266 aa19.02■□□□□ 0.64
CCDC38-205ENST00000546947 DDX58O95786 925 aaKnown RBP19.02■□□□□ 0.64
CCDC38-205ENST00000546947 HOXA10P31260 410 aaPredicted RBP19.02■□□□□ 0.64
CCDC38-205ENST00000546947 CCDC93Q567U6 631 aa19.02■□□□□ 0.64
CCDC38-205ENST00000546947 STK31Q9BXU1 1019 aa19.02■□□□□ 0.64
CCDC38-205ENST00000546947 TRMT112Q9UI30 125 aaKnown RBP19.02■□□□□ 0.64
CCDC38-205ENST00000546947 SH3TC1Q8TE82 1336 aa19.01■□□□□ 0.63
CCDC38-205ENST00000546947 DDX60Q8IY21 1712 aaKnown RBP19.01■□□□□ 0.63
CCDC38-205ENST00000546947 TRIM28Q13263 835 aaKnown RBP19.01■□□□□ 0.63
CCDC38-205ENST00000546947 RBM17Q96I25 401 aaKnown RBP19.01■□□□□ 0.63
CCDC38-205ENST00000546947 TAOK3Q9H2K8 898 aa19.01■□□□□ 0.63
CCDC38-205ENST00000546947 PRELPP51888 382 aa19■□□□□ 0.63
CCDC38-205ENST00000546947 CRAMP1Q96RY5 1269 aa19■□□□□ 0.63
CCDC38-205ENST00000546947 MYH16Q9H6N6 1097 aa19■□□□□ 0.63
CCDC38-205ENST00000546947 ATP5J2-PTCD1G3V325 749 aa18.99■□□□□ 0.63
CCDC38-205ENST00000546947 C1QTNF8P60827 252 aa18.99■□□□□ 0.63
CCDC38-205ENST00000546947 CC2D2BQ6DHV5 1058 aa18.98■□□□□ 0.63
CCDC38-205ENST00000546947 C3orf67Q6ZVT6 689 aa18.98■□□□□ 0.63
CCDC38-205ENST00000546947 RTKN2Q8IZC4 609 aa18.98■□□□□ 0.63
CCDC38-205ENST00000546947 SPINK5Q9NQ38 1064 aaPredicted RBP18.98■□□□□ 0.63
CCDC38-205ENST00000546947 KDM2BQ8NHM5 1336 aa18.98■□□□□ 0.63
CCDC38-205ENST00000546947 ZNF521Q96K83 1311 aa18.98■□□□□ 0.63
CCDC38-205ENST00000546947 VAMP4O75379 141 aa18.97■□□□□ 0.63
CCDC38-205ENST00000546947 FKBP4Q02790 459 aaKnown RBP eCLIP18.97■□□□□ 0.63
CCDC38-205ENST00000546947 EXOSC9Q06265 439 aaKnown RBP18.97■□□□□ 0.63
CCDC38-205ENST00000546947 SYNE4Q8N205 404 aa18.97■□□□□ 0.63
CCDC38-205ENST00000546947 MYD88Q99836 296 aa18.97■□□□□ 0.63
CCDC38-205ENST00000546947 KIF3CO14782 793 aa18.96■□□□□ 0.63
CCDC38-205ENST00000546947 SLC4A2P04920 1241 aa18.96■□□□□ 0.63
CCDC38-205ENST00000546947 HCLS1P14317 486 aaPredicted RBP18.96■□□□□ 0.63
CCDC38-205ENST00000546947 GRIPAP1Q4V328 841 aa18.96■□□□□ 0.63
CCDC38-205ENST00000546947 KSR2Q6VAB6 950 aa18.96■□□□□ 0.63
CCDC38-205ENST00000546947 CCDC191Q8NCU4 936 aa18.96■□□□□ 0.63
CCDC38-205ENST00000546947 METTL22Q9BUU2 404 aaPredicted RBP18.96■□□□□ 0.63
CCDC38-205ENST00000546947 SNED1Q8TER0 1413 aa18.95■□□□□ 0.62
CCDC38-205ENST00000546947 TCERG1O14776 1098 aaKnown RBP18.95■□□□□ 0.62
CCDC38-205ENST00000546947 PPEF1O14829 653 aaPredicted RBP18.95■□□□□ 0.62
CCDC38-205ENST00000546947 FAM89AQ96GI7 184 aa18.95■□□□□ 0.62
CCDC38-205ENST00000546947 MAP3K2Q9Y2U5 619 aa18.95■□□□□ 0.62
CCDC38-205ENST00000546947 PI4KAP2A4QPH2 592 aa18.94■□□□□ 0.62
CCDC38-205ENST00000546947 GLTPD2A6NH11 291 aa18.94■□□□□ 0.62
CCDC38-205ENST00000546947 MAPK8IP2Q13387 824 aaPredicted RBP18.94■□□□□ 0.62
CCDC38-205ENST00000546947 OLFM4Q6UX06 510 aa18.94■□□□□ 0.62
CCDC38-205ENST00000546947 PPP4R3CPQ6ZMV5 832 aa18.94■□□□□ 0.62
CCDC38-205ENST00000546947 PI4KAP1Q8N8J0 262 aa18.94■□□□□ 0.62
CCDC38-205ENST00000546947 ZBTB38Q8NAP3 1195 aaPredicted RBP18.94■□□□□ 0.62
CCDC38-205ENST00000546947 PSMD1Q99460 953 aa18.94■□□□□ 0.62
CCDC38-205ENST00000546947 ABCC4O15439 1325 aa18.94■□□□□ 0.62
CCDC38-205ENST00000546947 HSP90B1P14625 803 aaKnown RBP18.93■□□□□ 0.62
CCDC38-205ENST00000546947 DDX46Q7L014 1031 aaKnown RBP18.93■□□□□ 0.62
CCDC38-205ENST00000546947 ZNF428Q96B54 188 aa18.93■□□□□ 0.62
CCDC38-205ENST00000546947 NMRK2Q9NPI5 230 aa18.93■□□□□ 0.62
CCDC38-205ENST00000546947 CWC25Q9NXE8 425 aaPredicted RBP18.93■□□□□ 0.62
CCDC38-205ENST00000546947 TAF1P21675 1872 aa18.92■□□□□ 0.62
CCDC38-205ENST00000546947 IRS4O14654 1257 aaPredicted RBP18.92■□□□□ 0.62
CCDC38-205ENST00000546947 NEXNQ0ZGT2 675 aa18.92■□□□□ 0.62
CCDC38-205ENST00000546947 FLIIQ13045 1269 aa18.92■□□□□ 0.62
CCDC38-205ENST00000546947 SF3B3Q15393 1217 aaKnown RBP18.92■□□□□ 0.62
CCDC38-205ENST00000546947 DPY19L2Q6NUT2 758 aa18.92■□□□□ 0.62
CCDC38-205ENST00000546947 G2E3Q7L622 706 aa18.92■□□□□ 0.62
CCDC38-205ENST00000546947 TMX4Q9H1E5 349 aaPredicted RBP18.92■□□□□ 0.62
CCDC38-205ENST00000546947 BBOX1O75936 387 aa18.91■□□□□ 0.62
CCDC38-205ENST00000546947 PCCAP05165 728 aaPredicted RBP18.91■□□□□ 0.62
CCDC38-205ENST00000546947 GRAPQ13588 217 aa18.91■□□□□ 0.62
CCDC38-205ENST00000546947 GRAPLQ8TC17 118 aaPredicted RBP18.91■□□□□ 0.62
CCDC38-205ENST00000546947 ATP6V0A2Q9Y487 856 aa18.91■□□□□ 0.62
CCDC38-205ENST00000546947 WDR90Q96KV7 1748 aa18.91■□□□□ 0.62
CCDC38-205ENST00000546947 E9PSI1 815 aa18.9■□□□□ 0.62
CCDC38-205ENST00000546947 RTL5Q5HYW3 569 aaPredicted RBP18.9■□□□□ 0.62
CCDC38-205ENST00000546947 DIEXFQ68CQ4 756 aaKnown RBP18.9■□□□□ 0.62
CCDC38-205ENST00000546947 POTEDQ86YR6 584 aa18.9■□□□□ 0.62
CCDC38-205ENST00000546947 ZNF277Q9NRM2 450 aaPredicted RBP18.9■□□□□ 0.62
CCDC38-205ENST00000546947 MYH3P11055 1940 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms