RNA–Protein interactions for RNA: ENST00000546843.2

R3HDM2-209, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 823 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-209ENST00000546843 ARFGEF2Q9Y6D5 1785 aa21.53■■□□□ 1.04
R3HDM2-209ENST00000546843 KLRG2A4D1S0 409 aaPredicted RBP21.53■■□□□ 1.04
R3HDM2-209ENST00000546843 VAMP4O75379 141 aa21.53■■□□□ 1.04
R3HDM2-209ENST00000546843 RASSF7Q02833 373 aa21.53■■□□□ 1.04
R3HDM2-209ENST00000546843 PRPF40BQ6NWY9 871 aaKnown RBP21.53■■□□□ 1.04
R3HDM2-209ENST00000546843 C3orf67Q6ZVT6 689 aa21.53■■□□□ 1.04
R3HDM2-209ENST00000546843 G2E3Q7L622 706 aa21.53■■□□□ 1.04
R3HDM2-209ENST00000546843 SYNE4Q8N205 404 aa21.53■■□□□ 1.04
R3HDM2-209ENST00000546843 ZNF784Q8NCA9 323 aaPredicted RBP21.53■■□□□ 1.04
R3HDM2-209ENST00000546843 C21orf2O43822 256 aa21.52■■□□□ 1.04
R3HDM2-209ENST00000546843 NPR1P16066 1061 aa21.52■■□□□ 1.04
R3HDM2-209ENST00000546843 CNKSR1Q969H4 720 aa21.52■■□□□ 1.04
R3HDM2-209ENST00000546843 MYD88Q99836 296 aa21.52■■□□□ 1.04
R3HDM2-209ENST00000546843 ISCA1Q9BUE6 129 aa21.52■■□□□ 1.04
R3HDM2-209ENST00000546843 CHMP4AQ9BY43 222 aa21.52■■□□□ 1.04
R3HDM2-209ENST00000546843 SLC4A2P04920 1241 aa21.51■■□□□ 1.03
R3HDM2-209ENST00000546843 TRMT112Q9UI30 125 aaKnown RBP21.51■■□□□ 1.03
R3HDM2-209ENST00000546843 RIC1Q4ADV7 1423 aa21.51■■□□□ 1.03
R3HDM2-209ENST00000546843 HCLS1P14317 486 aaPredicted RBP21.5■■□□□ 1.03
R3HDM2-209ENST00000546843 ADCY9O60503 1353 aa21.49■■□□□ 1.03
R3HDM2-209ENST00000546843 DDX58O95786 925 aaKnown RBP21.49■■□□□ 1.03
R3HDM2-209ENST00000546843 RTL5Q5HYW3 569 aaPredicted RBP21.49■■□□□ 1.03
R3HDM2-209ENST00000546843 CDCA7LQ96GN5 454 aa21.49■■□□□ 1.03
R3HDM2-209ENST00000546843 MAP3K2Q9Y2U5 619 aa21.49■■□□□ 1.03
R3HDM2-209ENST00000546843 SH3TC1Q8TE82 1336 aa21.49■■□□□ 1.03
R3HDM2-209ENST00000546843 CACNA1SQ13698 1873 aa21.48■■□□□ 1.03
R3HDM2-209ENST00000546843 E9PSI1 815 aa21.48■■□□□ 1.03
R3HDM2-209ENST00000546843 CRY2Q49AN0 593 aa21.48■■□□□ 1.03
R3HDM2-209ENST00000546843 C9orf131Q5VYM1 1079 aa21.48■■□□□ 1.03
R3HDM2-209ENST00000546843 RPGRQ92834 1020 aaKnown RBP21.48■■□□□ 1.03
R3HDM2-209ENST00000546843 PI4KAP2A4QPH2 592 aa21.47■■□□□ 1.03
R3HDM2-209ENST00000546843 NFKBIEO00221 500 aa21.47■■□□□ 1.03
R3HDM2-209ENST00000546843 FLIIQ13045 1269 aa21.47■■□□□ 1.03
R3HDM2-209ENST00000546843 OLFM4Q6UX06 510 aa21.47■■□□□ 1.03
R3HDM2-209ENST00000546843 PI4KAP1Q8N8J0 262 aa21.47■■□□□ 1.03
R3HDM2-209ENST00000546843 ZNF526Q8TF50 670 aaPredicted RBP21.47■■□□□ 1.03
R3HDM2-209ENST00000546843 SLX4Q8IY92 1834 aa21.47■■□□□ 1.03
R3HDM2-209ENST00000546843 RNF123Q5XPI4 1314 aa21.47■■□□□ 1.03
R3HDM2-209ENST00000546843 PRELPP51888 382 aa21.46■■□□□ 1.03
R3HDM2-209ENST00000546843 SLFN5Q08AF3 891 aa21.46■■□□□ 1.03
R3HDM2-209ENST00000546843 KSR2Q6VAB6 950 aa21.46■■□□□ 1.03
R3HDM2-209ENST00000546843 SLC51AQ86UW1 340 aa21.46■■□□□ 1.03
R3HDM2-209ENST00000546843 FAM89AQ96GI7 184 aa21.46■■□□□ 1.03
R3HDM2-209ENST00000546843 METTL22Q9BUU2 404 aaPredicted RBP21.46■■□□□ 1.03
R3HDM2-209ENST00000546843 RNF181Q9P0P0 153 aa21.46■■□□□ 1.03
R3HDM2-209ENST00000546843 SLC10A5Q5PT55 438 aa21.45■■□□□ 1.02
R3HDM2-209ENST00000546843 NLRP3Q96P20 1036 aa21.45■■□□□ 1.02
R3HDM2-209ENST00000546843 TRIM28Q13263 835 aaKnown RBP21.44■■□□□ 1.02
R3HDM2-209ENST00000546843 FKBP5Q13451 457 aaPredicted RBP21.44■■□□□ 1.02
R3HDM2-209ENST00000546843 JARID2Q92833 1246 aaPredicted RBP21.44■■□□□ 1.02
R3HDM2-209ENST00000546843 C7orf43Q8WVR3 580 aa21.43■■□□□ 1.02
R3HDM2-209ENST00000546843 RBM17Q96I25 401 aaKnown RBP21.43■■□□□ 1.02
R3HDM2-209ENST00000546843 IGKV5-2P06315 115 aa21.42■■□□□ 1.02
R3HDM2-209ENST00000546843 ALDH1B1P30837 517 aa21.42■■□□□ 1.02
R3HDM2-209ENST00000546843 CWF19L2Q2TBE0 894 aaKnown RBP21.42■■□□□ 1.02
R3HDM2-209ENST00000546843 CCDC93Q567U6 631 aa21.42■■□□□ 1.02
R3HDM2-209ENST00000546843 CWC25Q9NXE8 425 aaPredicted RBP21.42■■□□□ 1.02
R3HDM2-209ENST00000546843 ABCC4O15439 1325 aa21.41■■□□□ 1.02
R3HDM2-209ENST00000546843 HOXA10P31260 410 aaPredicted RBP21.41■■□□□ 1.02
R3HDM2-209ENST00000546843 CCDC191Q8NCU4 936 aa21.41■■□□□ 1.02
R3HDM2-209ENST00000546843 DDX60Q8IY21 1712 aaKnown RBP21.41■■□□□ 1.02
R3HDM2-209ENST00000546843 IRS4O14654 1257 aaPredicted RBP21.4■■□□□ 1.02
R3HDM2-209ENST00000546843 LMNB1P20700 586 aa21.4■■□□□ 1.02
R3HDM2-209ENST00000546843 NEXNQ0ZGT2 675 aa21.4■■□□□ 1.02
R3HDM2-209ENST00000546843 SOGA3Q5TF21 947 aa21.4■■□□□ 1.02
R3HDM2-209ENST00000546843 ZBTB38Q8NAP3 1195 aaPredicted RBP21.4■■□□□ 1.02
R3HDM2-209ENST00000546843 TAOK3Q9H2K8 898 aa21.4■■□□□ 1.02
R3HDM2-209ENST00000546843 LAMB2P55268 1798 aa21.4■■□□□ 1.02
R3HDM2-209ENST00000546843 F6X3S4 739 aa21.39■■□□□ 1.01
R3HDM2-209ENST00000546843 PPEF1O14829 653 aaPredicted RBP21.39■■□□□ 1.01
R3HDM2-209ENST00000546843 DNAAF4Q8WXU2 420 aa21.39■■□□□ 1.01
R3HDM2-209ENST00000546843 CRAMP1Q96RY5 1269 aa21.39■■□□□ 1.01
R3HDM2-209ENST00000546843 HNRNPUQ00839 825 aaKnown RBP eCLIP21.38■■□□□ 1.01
R3HDM2-209ENST00000546843 NEURL1BA8MQ27 555 aa21.37■■□□□ 1.01
R3HDM2-209ENST00000546843 PCCAP05165 728 aaPredicted RBP21.37■■□□□ 1.01
R3HDM2-209ENST00000546843 TRMT2AQ8IZ69 625 aaKnown RBP21.37■■□□□ 1.01
R3HDM2-209ENST00000546843 BCL2L13Q9BXK5 485 aa21.37■■□□□ 1.01
R3HDM2-209ENST00000546843 GPBP1L1Q9HC44 474 aaPredicted RBP21.37■■□□□ 1.01
R3HDM2-209ENST00000546843 FER1L6Q2WGJ9 1857 aa21.37■■□□□ 1.01
R3HDM2-209ENST00000546843 LTBP3Q9NS15 1303 aa21.36■■□□□ 1.01
R3HDM2-209ENST00000546843 DDX46Q7L014 1031 aaKnown RBP21.36■■□□□ 1.01
R3HDM2-209ENST00000546843 FKBP4Q02790 459 aaKnown RBP eCLIP21.35■■□□□ 1.01
R3HDM2-209ENST00000546843 ZNF277Q9NRM2 450 aaPredicted RBP21.35■■□□□ 1.01
R3HDM2-209ENST00000546843 SNED1Q8TER0 1413 aa21.35■■□□□ 1.01
R3HDM2-209ENST00000546843 SBF1O95248 1867 aa21.35■■□□□ 1.01
R3HDM2-209ENST00000546843 COL4A1P02462 1669 aa21.34■■□□□ 1.01
R3HDM2-209ENST00000546843 GRAPQ13588 217 aa21.34■■□□□ 1.01
R3HDM2-209ENST00000546843 MRPL50Q8N5N7 158 aaKnown RBP21.34■■□□□ 1.01
R3HDM2-209ENST00000546843 GRAPLQ8TC17 118 aaPredicted RBP21.34■■□□□ 1.01
R3HDM2-209ENST00000546843 SSH1Q8WYL5 1049 aa21.34■■□□□ 1.01
R3HDM2-209ENST00000546843 CCDC85AQ96PX6 553 aaPredicted RBP21.34■■□□□ 1.01
R3HDM2-209ENST00000546843 TIAM2Q8IVF5 1701 aa21.34■■□□□ 1.01
R3HDM2-209ENST00000546843 SF3B3Q15393 1217 aaKnown RBP21.33■■□□□ 1.01
R3HDM2-209ENST00000546843 UBE3BQ7Z3V4 1068 aa21.33■■□□□ 1.01
R3HDM2-209ENST00000546843 RTKN2Q8IZC4 609 aa21.33■■□□□ 1.01
R3HDM2-209ENST00000546843 GCKRQ14397 625 aa21.32■■□□□ 1
R3HDM2-209ENST00000546843 LINS1Q8NG48 757 aa21.32■■□□□ 1
R3HDM2-209ENST00000546843 CELF1Q92879 486 aaKnown RBP21.32■■□□□ 1
R3HDM2-209ENST00000546843 CDHR2Q9BYE9 1310 aa21.31■■□□□ 1
R3HDM2-209ENST00000546843 PDE8AO60658 829 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms