RNA–Protein interactions for RNA: ENST00000546799.1

GDF11-202, Transcript of growth differentiation factor 11, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene GDF11, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF11-202ENST00000546799 LMNB1P20700 586 aa25.84■■□□□ 1.73
GDF11-202ENST00000546799 TCIRG1Q13488 830 aa25.84■■□□□ 1.73
GDF11-202ENST00000546799 PARP10Q53GL7 1025 aa25.84■■□□□ 1.73
GDF11-202ENST00000546799 NMRK2Q9NPI5 230 aa25.84■■□□□ 1.73
GDF11-202ENST00000546799 SALL2Q9Y467 1007 aaPredicted RBP25.84■■□□□ 1.73
GDF11-202ENST00000546799 NCBP3Q53F19 620 aaKnown RBP25.83■■□□□ 1.73
GDF11-202ENST00000546799 PLBD2Q8NHP8 589 aa25.83■■□□□ 1.73
GDF11-202ENST00000546799 PHAXQ9H814 394 aaKnown RBP25.83■■□□□ 1.73
GDF11-202ENST00000546799 TIAM2Q8IVF5 1701 aa25.83■■□□□ 1.72
GDF11-202ENST00000546799 FAM9BQ8IZU0 186 aa25.82■■□□□ 1.72
GDF11-202ENST00000546799 UTP14AQ9BVJ6 771 aaKnown RBP25.82■■□□□ 1.72
GDF11-202ENST00000546799 HYPKQ9NX55 129 aa25.82■■□□□ 1.72
GDF11-202ENST00000546799 SLC10A5Q5PT55 438 aa25.81■■□□□ 1.72
GDF11-202ENST00000546799 ANKRD13DQ6ZTN6 518 aa25.81■■□□□ 1.72
GDF11-202ENST00000546799 PPP1R42Q7Z4L9 355 aa25.81■■□□□ 1.72
GDF11-202ENST00000546799 SNED1Q8TER0 1413 aa25.8■■□□□ 1.72
GDF11-202ENST00000546799 LAMB2P55268 1798 aa25.8■■□□□ 1.72
GDF11-202ENST00000546799 HOXA10P31260 410 aaPredicted RBP25.8■■□□□ 1.72
GDF11-202ENST00000546799 IL16Q14005 1332 aa25.8■■□□□ 1.72
GDF11-202ENST00000546799 LTBP3Q9NS15 1303 aa25.8■■□□□ 1.72
GDF11-202ENST00000546799 DICER1Q9UPY3 1922 aaKnown RBP25.8■■□□□ 1.72
GDF11-202ENST00000546799 HSP90AB3PQ58FF7 597 aa25.79■■□□□ 1.72
GDF11-202ENST00000546799 ISCA1Q9BUE6 129 aa25.79■■□□□ 1.72
GDF11-202ENST00000546799 SPINK5Q9NQ38 1064 aaPredicted RBP25.79■■□□□ 1.72
GDF11-202ENST00000546799 TAOK3Q9H2K8 898 aa25.78■■□□□ 1.72
GDF11-202ENST00000546799 CEP350Q5VT06 3117 aa25.78■■□□□ 1.72
GDF11-202ENST00000546799 ATP5J2-PTCD1G3V325 749 aa25.77■■□□□ 1.72
GDF11-202ENST00000546799 HCLS1P14317 486 aaPredicted RBP25.77■■□□□ 1.72
GDF11-202ENST00000546799 TCERG1O14776 1098 aaKnown RBP25.76■■□□□ 1.71
GDF11-202ENST00000546799 ALDH1B1P30837 517 aa25.76■■□□□ 1.71
GDF11-202ENST00000546799 FANCIQ9NVI1 1328 aa25.76■■□□□ 1.71
GDF11-202ENST00000546799 CCDC93Q567U6 631 aa25.75■■□□□ 1.71
GDF11-202ENST00000546799 TRMT112Q9UI30 125 aaKnown RBP25.75■■□□□ 1.71
GDF11-202ENST00000546799 DDX60Q8IY21 1712 aaKnown RBP25.74■■□□□ 1.71
GDF11-202ENST00000546799 RNF123Q5XPI4 1314 aa25.74■■□□□ 1.71
GDF11-202ENST00000546799 ZC3H4Q9UPT8 1303 aaKnown RBP25.74■■□□□ 1.71
GDF11-202ENST00000546799 SOGA3Q5TF21 947 aa25.74■■□□□ 1.71
GDF11-202ENST00000546799 WDR63Q8IWG1 891 aa25.74■■□□□ 1.71
GDF11-202ENST00000546799 RPGRQ92834 1020 aaKnown RBP25.74■■□□□ 1.71
GDF11-202ENST00000546799 CRAMP1Q96RY5 1269 aa25.74■■□□□ 1.71
GDF11-202ENST00000546799 CCDC30Q5VVM6 783 aa25.73■■□□□ 1.71
GDF11-202ENST00000546799 NLRP3Q96P20 1036 aa25.73■■□□□ 1.71
GDF11-202ENST00000546799 TAF1P21675 1872 aa25.72■■□□□ 1.71
GDF11-202ENST00000546799 TWISTNBQ3B726 338 aaPredicted RBP25.72■■□□□ 1.71
GDF11-202ENST00000546799 RRAGCQ9HB90 399 aa25.72■■□□□ 1.71
GDF11-202ENST00000546799 KDM2BQ8NHM5 1336 aa25.71■■□□□ 1.71
GDF11-202ENST00000546799 SH3TC1Q8TE82 1336 aa25.71■■□□□ 1.71
GDF11-202ENST00000546799 GLTPD2A6NH11 291 aa25.71■■□□□ 1.71
GDF11-202ENST00000546799 FKBP4Q02790 459 aaKnown RBP eCLIP25.71■■□□□ 1.71
GDF11-202ENST00000546799 TRIM28Q13263 835 aaKnown RBP25.71■■□□□ 1.71
GDF11-202ENST00000546799 G2E3Q7L622 706 aa25.71■■□□□ 1.71
GDF11-202ENST00000546799 RIC3Q7Z5B4 369 aa25.71■■□□□ 1.71
GDF11-202ENST00000546799 FAM89AQ96GI7 184 aa25.71■■□□□ 1.71
GDF11-202ENST00000546799 ZNF277Q9NRM2 450 aaPredicted RBP25.71■■□□□ 1.71
GDF11-202ENST00000546799 COL4A1P02462 1669 aa25.71■■□□□ 1.71
GDF11-202ENST00000546799 GOLGA2Q08379 1002 aa25.7■■□□□ 1.7
GDF11-202ENST00000546799 RBM17Q96I25 401 aaKnown RBP25.7■■□□□ 1.7
GDF11-202ENST00000546799 ABCC4O15439 1325 aa25.69■■□□□ 1.7
GDF11-202ENST00000546799 POTECB2RU33 542 aa25.69■■□□□ 1.7
GDF11-202ENST00000546799 COL4A5P29400 1685 aa25.68■■□□□ 1.7
GDF11-202ENST00000546799 RTL5Q5HYW3 569 aaPredicted RBP25.68■■□□□ 1.7
GDF11-202ENST00000546799 RTKN2Q8IZC4 609 aa25.68■■□□□ 1.7
GDF11-202ENST00000546799 MYD88Q99836 296 aa25.68■■□□□ 1.7
GDF11-202ENST00000546799 ZNF521Q96K83 1311 aa25.67■■□□□ 1.7
GDF11-202ENST00000546799 PPEF1O14829 653 aaPredicted RBP25.67■■□□□ 1.7
GDF11-202ENST00000546799 VAMP4O75379 141 aa25.67■■□□□ 1.7
GDF11-202ENST00000546799 TOMM70O94826 608 aa25.67■■□□□ 1.7
GDF11-202ENST00000546799 EXOSC9Q06265 439 aaKnown RBP25.67■■□□□ 1.7
GDF11-202ENST00000546799 WDR90Q96KV7 1748 aa25.66■■□□□ 1.7
GDF11-202ENST00000546799 PSMD1Q99460 953 aa25.65■■□□□ 1.7
GDF11-202ENST00000546799 METTL22Q9BUU2 404 aaPredicted RBP25.65■■□□□ 1.7
GDF11-202ENST00000546799 MAP3K2Q9Y2U5 619 aa25.65■■□□□ 1.7
GDF11-202ENST00000546799 PI4KAP2A4QPH2 592 aa25.64■■□□□ 1.7
GDF11-202ENST00000546799 SLC4A2P04920 1241 aa25.64■■□□□ 1.7
GDF11-202ENST00000546799 PI4KAP1Q8N8J0 262 aa25.64■■□□□ 1.7
GDF11-202ENST00000546799 JARID2Q92833 1246 aaPredicted RBP25.64■■□□□ 1.7
GDF11-202ENST00000546799 DDNO94850 711 aaPredicted RBP25.63■■□□□ 1.69
GDF11-202ENST00000546799 IGKV5-2P06315 115 aa25.63■■□□□ 1.69
GDF11-202ENST00000546799 IARSP41252 1262 aaKnown RBP25.63■■□□□ 1.69
GDF11-202ENST00000546799 CC2D2BQ6DHV5 1058 aa25.63■■□□□ 1.69
GDF11-202ENST00000546799 KSR2Q6VAB6 950 aa25.63■■□□□ 1.69
GDF11-202ENST00000546799 ATP6V0A2Q9Y487 856 aa25.63■■□□□ 1.69
GDF11-202ENST00000546799 ZNF541Q9H0D2 1346 aa25.63■■□□□ 1.69
GDF11-202ENST00000546799 SF3B3Q15393 1217 aaKnown RBP25.62■■□□□ 1.69
GDF11-202ENST00000546799 STK31Q9BXU1 1019 aa25.62■■□□□ 1.69
GDF11-202ENST00000546799 IRS4O14654 1257 aaPredicted RBP25.61■■□□□ 1.69
GDF11-202ENST00000546799 ZBTB38Q8NAP3 1195 aaPredicted RBP25.61■■□□□ 1.69
GDF11-202ENST00000546799 CCDC191Q8NCU4 936 aa25.61■■□□□ 1.69
GDF11-202ENST00000546799 CHMP4AQ9BY43 222 aa25.61■■□□□ 1.69
GDF11-202ENST00000546799 DDX58O95786 925 aaKnown RBP25.6■■□□□ 1.69
GDF11-202ENST00000546799 HSPA6P17066 643 aa25.6■■□□□ 1.69
GDF11-202ENST00000546799 RBM46Q8TBY0 533 aaKnown RBP25.6■■□□□ 1.69
GDF11-202ENST00000546799 BBOX1O75936 387 aa25.59■■□□□ 1.69
GDF11-202ENST00000546799 VEGFAP15692 232 aaPredicted RBP25.59■■□□□ 1.69
GDF11-202ENST00000546799 GRAPQ13588 217 aa25.59■■□□□ 1.69
GDF11-202ENST00000546799 DPY19L2Q6NUT2 758 aa25.59■■□□□ 1.69
GDF11-202ENST00000546799 DDX46Q7L014 1031 aaKnown RBP25.59■■□□□ 1.69
GDF11-202ENST00000546799 GRAPLQ8TC17 118 aaPredicted RBP25.59■■□□□ 1.69
GDF11-202ENST00000546799 CELF1Q92879 486 aaKnown RBP25.59■■□□□ 1.69
GDF11-202ENST00000546799 CWC25Q9NXE8 425 aaPredicted RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms