RNA–Protein interactions for RNA: ENST00000546546.1

NOVA1-207, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 4

Gene NOVA1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-207ENST00000546546 RTL5Q5HYW3 569 aaPredicted RBP16.76■□□□□ 0.27
NOVA1-207ENST00000546546 PRPF40BQ6NWY9 871 aaKnown RBP16.76■□□□□ 0.27
NOVA1-207ENST00000546546 ZNF526Q8TF50 670 aaPredicted RBP16.76■□□□□ 0.27
NOVA1-207ENST00000546546 MYD88Q99836 296 aa16.76■□□□□ 0.27
NOVA1-207ENST00000546546 KLRG2A4D1S0 409 aaPredicted RBP16.75■□□□□ 0.27
NOVA1-207ENST00000546546 DDX58O95786 925 aaKnown RBP16.75■□□□□ 0.27
NOVA1-207ENST00000546546 C9orf131Q5VYM1 1079 aa16.75■□□□□ 0.27
NOVA1-207ENST00000546546 C3orf67Q6ZVT6 689 aa16.75■□□□□ 0.27
NOVA1-207ENST00000546546 G2E3Q7L622 706 aa16.75■□□□□ 0.27
NOVA1-207ENST00000546546 RPGRQ92834 1020 aaKnown RBP16.75■□□□□ 0.27
NOVA1-207ENST00000546546 ZNF521Q96K83 1311 aa16.74■□□□□ 0.27
NOVA1-207ENST00000546546 NLRP3Q96P20 1036 aa16.74■□□□□ 0.27
NOVA1-207ENST00000546546 ISCA1Q9BUE6 129 aa16.74■□□□□ 0.27
NOVA1-207ENST00000546546 MAP3K2Q9Y2U5 619 aa16.74■□□□□ 0.27
NOVA1-207ENST00000546546 FAM89AQ96GI7 184 aa16.73■□□□□ 0.27
NOVA1-207ENST00000546546 RNF181Q9P0P0 153 aa16.73■□□□□ 0.27
NOVA1-207ENST00000546546 SH3TC1Q8TE82 1336 aa16.72■□□□□ 0.27
NOVA1-207ENST00000546546 PI4KAP2A4QPH2 592 aa16.72■□□□□ 0.27
NOVA1-207ENST00000546546 ALDH1B1P30837 517 aa16.72■□□□□ 0.27
NOVA1-207ENST00000546546 OLFM4Q6UX06 510 aa16.72■□□□□ 0.27
NOVA1-207ENST00000546546 PI4KAP1Q8N8J0 262 aa16.72■□□□□ 0.27
NOVA1-207ENST00000546546 JARID2Q92833 1246 aaPredicted RBP16.72■□□□□ 0.27
NOVA1-207ENST00000546546 CDCA7LQ96GN5 454 aa16.72■□□□□ 0.27
NOVA1-207ENST00000546546 RBM17Q96I25 401 aaKnown RBP16.72■□□□□ 0.27
NOVA1-207ENST00000546546 IBTKQ9P2D0 1353 aaPredicted RBP16.72■□□□□ 0.27
NOVA1-207ENST00000546546 CRY2Q49AN0 593 aa16.71■□□□□ 0.27
NOVA1-207ENST00000546546 SLC10A5Q5PT55 438 aa16.71■□□□□ 0.27
NOVA1-207ENST00000546546 KSR2Q6VAB6 950 aa16.71■□□□□ 0.27
NOVA1-207ENST00000546546 METTL22Q9BUU2 404 aaPredicted RBP16.71■□□□□ 0.27
NOVA1-207ENST00000546546 ANKRD31Q8N7Z5 1873 aa16.71■□□□□ 0.27
NOVA1-207ENST00000546546 NUP98P52948 1817 aa16.7■□□□□ 0.26
NOVA1-207ENST00000546546 E9PSI1 815 aa16.7■□□□□ 0.26
NOVA1-207ENST00000546546 NFKBIEO00221 500 aa16.7■□□□□ 0.26
NOVA1-207ENST00000546546 FLIIQ13045 1269 aa16.7■□□□□ 0.26
NOVA1-207ENST00000546546 FKBP5Q13451 457 aaPredicted RBP16.7■□□□□ 0.26
NOVA1-207ENST00000546546 SLFN5Q08AF3 891 aa16.69■□□□□ 0.26
NOVA1-207ENST00000546546 TRIM28Q13263 835 aaKnown RBP16.69■□□□□ 0.26
NOVA1-207ENST00000546546 GPBP1L1Q9HC44 474 aaPredicted RBP16.69■□□□□ 0.26
NOVA1-207ENST00000546546 RNF123Q5XPI4 1314 aa16.69■□□□□ 0.26
NOVA1-207ENST00000546546 LMNB1P20700 586 aa16.68■□□□□ 0.26
NOVA1-207ENST00000546546 PRELPP51888 382 aa16.68■□□□□ 0.26
NOVA1-207ENST00000546546 NEXNQ0ZGT2 675 aa16.68■□□□□ 0.26
NOVA1-207ENST00000546546 CCDC93Q567U6 631 aa16.68■□□□□ 0.26
NOVA1-207ENST00000546546 C7orf43Q8WVR3 580 aa16.68■□□□□ 0.26
NOVA1-207ENST00000546546 CWC25Q9NXE8 425 aaPredicted RBP16.68■□□□□ 0.26
NOVA1-207ENST00000546546 ADCY9O60503 1353 aa16.67■□□□□ 0.26
NOVA1-207ENST00000546546 IRS4O14654 1257 aaPredicted RBP16.67■□□□□ 0.26
NOVA1-207ENST00000546546 HOXA10P31260 410 aaPredicted RBP16.67■□□□□ 0.26
NOVA1-207ENST00000546546 CWF19L2Q2TBE0 894 aaKnown RBP16.67■□□□□ 0.26
NOVA1-207ENST00000546546 SOGA3Q5TF21 947 aa16.67■□□□□ 0.26
NOVA1-207ENST00000546546 SLC51AQ86UW1 340 aa16.67■□□□□ 0.26
NOVA1-207ENST00000546546 ZBTB38Q8NAP3 1195 aaPredicted RBP16.67■□□□□ 0.26
NOVA1-207ENST00000546546 CCDC191Q8NCU4 936 aa16.67■□□□□ 0.26
NOVA1-207ENST00000546546 TAOK3Q9H2K8 898 aa16.67■□□□□ 0.26
NOVA1-207ENST00000546546 COL11A2P13942 1736 aaPredicted RBP16.67■□□□□ 0.26
NOVA1-207ENST00000546546 BRCA1P38398 1863 aaKnown RBP16.67■□□□□ 0.26
NOVA1-207ENST00000546546 CHD4Q14839 1912 aa16.66■□□□□ 0.26
NOVA1-207ENST00000546546 PPEF1O14829 653 aaPredicted RBP16.66■□□□□ 0.26
NOVA1-207ENST00000546546 IGKV5-2P06315 115 aa16.66■□□□□ 0.26
NOVA1-207ENST00000546546 DDX46Q7L014 1031 aaKnown RBP16.66■□□□□ 0.26
NOVA1-207ENST00000546546 CRAMP1Q96RY5 1269 aa16.66■□□□□ 0.26
NOVA1-207ENST00000546546 F6X3S4 739 aa16.65■□□□□ 0.26
NOVA1-207ENST00000546546 DNAAF4Q8WXU2 420 aa16.65■□□□□ 0.26
NOVA1-207ENST00000546546 TNRC6CQ9HCJ0 1690 aaKnown RBP16.65■□□□□ 0.26
NOVA1-207ENST00000546546 RIC1Q4ADV7 1423 aa16.64■□□□□ 0.25
NOVA1-207ENST00000546546 PCCAP05165 728 aaPredicted RBP16.64■□□□□ 0.25
NOVA1-207ENST00000546546 HNRNPUQ00839 825 aaKnown RBP eCLIP16.64■□□□□ 0.25
NOVA1-207ENST00000546546 RTKN2Q8IZC4 609 aa16.64■□□□□ 0.25
NOVA1-207ENST00000546546 CCDC85AQ96PX6 553 aaPredicted RBP16.64■□□□□ 0.25
NOVA1-207ENST00000546546 TMX4Q9H1E5 349 aaPredicted RBP16.64■□□□□ 0.25
NOVA1-207ENST00000546546 ZNF277Q9NRM2 450 aaPredicted RBP16.64■□□□□ 0.25
NOVA1-207ENST00000546546 ABCC4O15439 1325 aa16.64■□□□□ 0.25
NOVA1-207ENST00000546546 NEURL1BA8MQ27 555 aa16.63■□□□□ 0.25
NOVA1-207ENST00000546546 BCL2L13Q9BXK5 485 aa16.63■□□□□ 0.25
NOVA1-207ENST00000546546 DLEC1Q9Y238 1755 aa16.63■□□□□ 0.25
NOVA1-207ENST00000546546 SLX4Q8IY92 1834 aa16.63■□□□□ 0.25
NOVA1-207ENST00000546546 ARFGEF1Q9Y6D6 1849 aa16.63■□□□□ 0.25
NOVA1-207ENST00000546546 FKBP4Q02790 459 aaKnown RBP eCLIP16.62■□□□□ 0.25
NOVA1-207ENST00000546546 BBOX1O75936 387 aa16.61■□□□□ 0.25
NOVA1-207ENST00000546546 HSP90B1P14625 803 aaKnown RBP16.61■□□□□ 0.25
NOVA1-207ENST00000546546 GRAPQ13588 217 aa16.61■□□□□ 0.25
NOVA1-207ENST00000546546 SF3B3Q15393 1217 aaKnown RBP16.61■□□□□ 0.25
NOVA1-207ENST00000546546 SLC4A10Q6U841 1118 aa16.61■□□□□ 0.25
NOVA1-207ENST00000546546 MRPL50Q8N5N7 158 aaKnown RBP16.61■□□□□ 0.25
NOVA1-207ENST00000546546 GRAPLQ8TC17 118 aaPredicted RBP16.61■□□□□ 0.25
NOVA1-207ENST00000546546 PDE8AO60658 829 aa16.6■□□□□ 0.25
NOVA1-207ENST00000546546 CC2D2BQ6DHV5 1058 aa16.6■□□□□ 0.25
NOVA1-207ENST00000546546 UBE3BQ7Z3V4 1068 aa16.6■□□□□ 0.25
NOVA1-207ENST00000546546 TRMT2AQ8IZ69 625 aaKnown RBP16.6■□□□□ 0.25
NOVA1-207ENST00000546546 LINS1Q8NG48 757 aa16.6■□□□□ 0.25
NOVA1-207ENST00000546546 SSH1Q8WYL5 1049 aa16.6■□□□□ 0.25
NOVA1-207ENST00000546546 CELF1Q92879 486 aaKnown RBP16.6■□□□□ 0.25
NOVA1-207ENST00000546546 NMRK2Q9NPI5 230 aa16.6■□□□□ 0.25
NOVA1-207ENST00000546546 ATP6V0A2Q9Y487 856 aa16.6■□□□□ 0.25
NOVA1-207ENST00000546546 LTBP3Q9NS15 1303 aa16.6■□□□□ 0.25
NOVA1-207ENST00000546546 GCKRQ14397 625 aa16.59■□□□□ 0.25
NOVA1-207ENST00000546546 RRAGCQ9HB90 399 aa16.59■□□□□ 0.25
NOVA1-207ENST00000546546 SEC31BQ9NQW1 1179 aa16.59■□□□□ 0.25
NOVA1-207ENST00000546546 ARFGEF2Q9Y6D5 1785 aa16.59■□□□□ 0.25
NOVA1-207ENST00000546546 CCDC152Q4G0S7 254 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms