RNA–Protein interactions for RNA: ENST00000546480.1

VENTXP3-201, Transcript of VENT homeobox pseudogene 3, humanhuman

BASIC

Gene VENTXP3, Length 773 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VENTXP3-201ENST00000546480 MYD88Q99836 296 aa17.66■□□□□ 0.42
VENTXP3-201ENST00000546480 TRMT112Q9UI30 125 aaKnown RBP17.66■□□□□ 0.42
VENTXP3-201ENST00000546480 VAMP4O75379 141 aa17.65■□□□□ 0.42
VENTXP3-201ENST00000546480 NTSR2O95665 410 aa17.65■□□□□ 0.42
VENTXP3-201ENST00000546480 MASTLQ96GX5 879 aa17.65■□□□□ 0.42
VENTXP3-201ENST00000546480 IBTKQ9P2D0 1353 aaPredicted RBP17.65■□□□□ 0.42
VENTXP3-201ENST00000546480 HNRNPUQ00839 825 aaKnown RBP eCLIP17.64■□□□□ 0.41
VENTXP3-201ENST00000546480 NLRP10Q86W26 655 aa17.64■□□□□ 0.41
VENTXP3-201ENST00000546480 SRGNP10124 158 aa17.63■□□□□ 0.41
VENTXP3-201ENST00000546480 FKBP5Q13451 457 aaPredicted RBP17.63■□□□□ 0.41
VENTXP3-201ENST00000546480 RTL5Q5HYW3 569 aaPredicted RBP17.63■□□□□ 0.41
VENTXP3-201ENST00000546480 G2E3Q7L622 706 aa17.63■□□□□ 0.41
VENTXP3-201ENST00000546480 RPGRQ92834 1020 aaKnown RBP17.63■□□□□ 0.41
VENTXP3-201ENST00000546480 CNKSR1Q969H4 720 aa17.63■□□□□ 0.41
VENTXP3-201ENST00000546480 CDCA7LQ96GN5 454 aa17.63■□□□□ 0.41
VENTXP3-201ENST00000546480 MAP3K2Q9Y2U5 619 aa17.63■□□□□ 0.41
VENTXP3-201ENST00000546480 NPR1P16066 1061 aa17.62■□□□□ 0.41
VENTXP3-201ENST00000546480 SLFN5Q08AF3 891 aa17.62■□□□□ 0.41
VENTXP3-201ENST00000546480 FLIIQ13045 1269 aa17.62■□□□□ 0.41
VENTXP3-201ENST00000546480 STYK1Q6J9G0 422 aa17.62■□□□□ 0.41
VENTXP3-201ENST00000546480 PI4KAP2A4QPH2 592 aa17.61■□□□□ 0.41
VENTXP3-201ENST00000546480 C21orf2O43822 256 aa17.61■□□□□ 0.41
VENTXP3-201ENST00000546480 NEXNQ0ZGT2 675 aa17.61■□□□□ 0.41
VENTXP3-201ENST00000546480 KSR2Q6VAB6 950 aa17.61■□□□□ 0.41
VENTXP3-201ENST00000546480 PI4KAP1Q8N8J0 262 aa17.61■□□□□ 0.41
VENTXP3-201ENST00000546480 NLRP3Q96P20 1036 aa17.61■□□□□ 0.41
VENTXP3-201ENST00000546480 SH3TC1Q8TE82 1336 aa17.61■□□□□ 0.41
VENTXP3-201ENST00000546480 HCLS1P14317 486 aaPredicted RBP17.6■□□□□ 0.41
VENTXP3-201ENST00000546480 PRPF40BQ6NWY9 871 aaKnown RBP17.6■□□□□ 0.41
VENTXP3-201ENST00000546480 ISCA1Q9BUE6 129 aa17.6■□□□□ 0.41
VENTXP3-201ENST00000546480 RNF123Q5XPI4 1314 aa17.6■□□□□ 0.41
VENTXP3-201ENST00000546480 ALDH1B1P30837 517 aa17.59■□□□□ 0.41
VENTXP3-201ENST00000546480 FAM89AQ96GI7 184 aa17.59■□□□□ 0.41
VENTXP3-201ENST00000546480 METTL22Q9BUU2 404 aaPredicted RBP17.59■□□□□ 0.41
VENTXP3-201ENST00000546480 RIC1Q4ADV7 1423 aa17.58■□□□□ 0.41
VENTXP3-201ENST00000546480 ADCY9O60503 1353 aa17.58■□□□□ 0.4
VENTXP3-201ENST00000546480 RASSF7Q02833 373 aa17.58■□□□□ 0.4
VENTXP3-201ENST00000546480 SYNE4Q8N205 404 aa17.58■□□□□ 0.4
VENTXP3-201ENST00000546480 RBM17Q96I25 401 aaKnown RBP17.58■□□□□ 0.4
VENTXP3-201ENST00000546480 CWC25Q9NXE8 425 aaPredicted RBP17.58■□□□□ 0.4
VENTXP3-201ENST00000546480 CACNA1FO60840 1977 aa17.58■□□□□ 0.4
VENTXP3-201ENST00000546480 SLX4Q8IY92 1834 aa17.58■□□□□ 0.4
VENTXP3-201ENST00000546480 LAMB2P55268 1798 aa17.58■□□□□ 0.4
VENTXP3-201ENST00000546480 DDX60Q8IY21 1712 aaKnown RBP17.57■□□□□ 0.4
VENTXP3-201ENST00000546480 KLRG2A4D1S0 409 aaPredicted RBP17.56■□□□□ 0.4
VENTXP3-201ENST00000546480 C3orf67Q6ZVT6 689 aa17.56■□□□□ 0.4
VENTXP3-201ENST00000546480 CCDC191Q8NCU4 936 aa17.56■□□□□ 0.4
VENTXP3-201ENST00000546480 BCL2L13Q9BXK5 485 aa17.56■□□□□ 0.4
VENTXP3-201ENST00000546480 IRS4O14654 1257 aaPredicted RBP17.55■□□□□ 0.4
VENTXP3-201ENST00000546480 CWF19L2Q2TBE0 894 aaKnown RBP17.55■□□□□ 0.4
VENTXP3-201ENST00000546480 CRY2Q49AN0 593 aa17.55■□□□□ 0.4
VENTXP3-201ENST00000546480 SOGA3Q5TF21 947 aa17.55■□□□□ 0.4
VENTXP3-201ENST00000546480 ZNF526Q8TF50 670 aaPredicted RBP17.55■□□□□ 0.4
VENTXP3-201ENST00000546480 DNAAF4Q8WXU2 420 aa17.55■□□□□ 0.4
VENTXP3-201ENST00000546480 JARID2Q92833 1246 aaPredicted RBP17.55■□□□□ 0.4
VENTXP3-201ENST00000546480 RNF181Q9P0P0 153 aa17.55■□□□□ 0.4
VENTXP3-201ENST00000546480 TRIM28Q13263 835 aaKnown RBP17.54■□□□□ 0.4
VENTXP3-201ENST00000546480 CCDC93Q567U6 631 aa17.54■□□□□ 0.4
VENTXP3-201ENST00000546480 SLC10A5Q5PT55 438 aa17.54■□□□□ 0.4
VENTXP3-201ENST00000546480 C9orf131Q5VYM1 1079 aa17.54■□□□□ 0.4
VENTXP3-201ENST00000546480 DDX46Q7L014 1031 aaKnown RBP17.54■□□□□ 0.4
VENTXP3-201ENST00000546480 ZBTB38Q8NAP3 1195 aaPredicted RBP17.54■□□□□ 0.4
VENTXP3-201ENST00000546480 TMX4Q9H1E5 349 aaPredicted RBP17.54■□□□□ 0.4
VENTXP3-201ENST00000546480 F6X3S4 739 aa17.53■□□□□ 0.4
VENTXP3-201ENST00000546480 PPEF1O14829 653 aaPredicted RBP17.53■□□□□ 0.4
VENTXP3-201ENST00000546480 SLC4A10Q6U841 1118 aa17.53■□□□□ 0.4
VENTXP3-201ENST00000546480 SMC4Q9NTJ3 1288 aa17.53■□□□□ 0.4
VENTXP3-201ENST00000546480 ABCC4O15439 1325 aa17.52■□□□□ 0.4
VENTXP3-201ENST00000546480 NEURL1BA8MQ27 555 aa17.52■□□□□ 0.4
VENTXP3-201ENST00000546480 PCCAP05165 728 aaPredicted RBP17.52■□□□□ 0.4
VENTXP3-201ENST00000546480 IGKV5-2P06315 115 aa17.52■□□□□ 0.4
VENTXP3-201ENST00000546480 HSP90B1P14625 803 aaKnown RBP17.52■□□□□ 0.4
VENTXP3-201ENST00000546480 OLFM4Q6UX06 510 aa17.52■□□□□ 0.4
VENTXP3-201ENST00000546480 ZNF784Q8NCA9 323 aaPredicted RBP17.52■□□□□ 0.4
VENTXP3-201ENST00000546480 TAOK3Q9H2K8 898 aa17.52■□□□□ 0.4
VENTXP3-201ENST00000546480 MRPL50Q8N5N7 158 aaKnown RBP17.51■□□□□ 0.39
VENTXP3-201ENST00000546480 SSH1Q8WYL5 1049 aa17.51■□□□□ 0.39
VENTXP3-201ENST00000546480 CCDC85AQ96PX6 553 aaPredicted RBP17.51■□□□□ 0.39
VENTXP3-201ENST00000546480 CRAMP1Q96RY5 1269 aa17.51■□□□□ 0.39
VENTXP3-201ENST00000546480 FER1L6Q2WGJ9 1857 aa17.5■□□□□ 0.39
VENTXP3-201ENST00000546480 CCDC88AQ3V6T2 1871 aa17.5■□□□□ 0.39
VENTXP3-201ENST00000546480 TIAM2Q8IVF5 1701 aa17.5■□□□□ 0.39
VENTXP3-201ENST00000546480 NFKBIEO00221 500 aa17.5■□□□□ 0.39
VENTXP3-201ENST00000546480 LMNB1P20700 586 aa17.5■□□□□ 0.39
VENTXP3-201ENST00000546480 HOXA10P31260 410 aaPredicted RBP17.5■□□□□ 0.39
VENTXP3-201ENST00000546480 TRMT2AQ8IZ69 625 aaKnown RBP17.5■□□□□ 0.39
VENTXP3-201ENST00000546480 SBF1O95248 1867 aa17.5■□□□□ 0.39
VENTXP3-201ENST00000546480 PDE8AO60658 829 aa17.49■□□□□ 0.39
VENTXP3-201ENST00000546480 UBE3BQ7Z3V4 1068 aa17.49■□□□□ 0.39
VENTXP3-201ENST00000546480 LINS1Q8NG48 757 aa17.49■□□□□ 0.39
VENTXP3-201ENST00000546480 TAF1P21675 1872 aa17.48■□□□□ 0.39
VENTXP3-201ENST00000546480 CT47B1P0C2W7 299 aaPredicted RBP17.48■□□□□ 0.39
VENTXP3-201ENST00000546480 GRAPQ13588 217 aa17.48■□□□□ 0.39
VENTXP3-201ENST00000546480 ALDH1L2Q3SY69 923 aa17.48■□□□□ 0.39
VENTXP3-201ENST00000546480 RTKN2Q8IZC4 609 aa17.48■□□□□ 0.39
VENTXP3-201ENST00000546480 GRAPLQ8TC17 118 aaPredicted RBP17.48■□□□□ 0.39
VENTXP3-201ENST00000546480 GPBP1L1Q9HC44 474 aaPredicted RBP17.48■□□□□ 0.39
VENTXP3-201ENST00000546480 FKBP4Q02790 459 aaKnown RBP eCLIP17.47■□□□□ 0.39
VENTXP3-201ENST00000546480 GCKRQ14397 625 aa17.47■□□□□ 0.39
VENTXP3-201ENST00000546480 CCDC152Q4G0S7 254 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms