RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 CCAR2Q8N163 923 aaKnown RBP11.6□□□□□ -0.55
TRAF1-203ENST00000546084 ZNF496Q96IT1 587 aaPredicted RBP11.6□□□□□ -0.55
TRAF1-203ENST00000546084 NCOA5Q9HCD5 579 aaKnown RBP11.6□□□□□ -0.55
TRAF1-203ENST00000546084 LRRC7Q96NW7 1537 aa11.6□□□□□ -0.55
TRAF1-203ENST00000546084 BRD1O95696 1058 aa11.59□□□□□ -0.55
TRAF1-203ENST00000546084 CNNM1Q9NRU3 951 aa11.59□□□□□ -0.55
TRAF1-203ENST00000546084 EIF4A1P60842 406 aaKnown RBP11.59□□□□□ -0.55
TRAF1-203ENST00000546084 KRT85P78386 507 aa11.59□□□□□ -0.55
TRAF1-203ENST00000546084 EAF2Q96CJ1 260 aaPredicted RBP11.59□□□□□ -0.55
TRAF1-203ENST00000546084 DBNDD2Q9BQY9 259 aa11.59□□□□□ -0.55
TRAF1-203ENST00000546084 MAP3K5Q99683 1374 aa11.59□□□□□ -0.55
TRAF1-203ENST00000546084 PES1O00541 588 aaKnown RBP11.59□□□□□ -0.55
TRAF1-203ENST00000546084 RALYLQ86SE5 291 aaKnown RBP11.59□□□□□ -0.55
TRAF1-203ENST00000546084 ADGRB2O60241 1585 aa11.58□□□□□ -0.55
TRAF1-203ENST00000546084 JAK2O60674 1132 aa11.58□□□□□ -0.56
TRAF1-203ENST00000546084 IGSF3O75054 1194 aa11.58□□□□□ -0.56
TRAF1-203ENST00000546084 CFAP74Q9C0B2 1584 aa11.58□□□□□ -0.56
TRAF1-203ENST00000546084 MED14O60244 1454 aa11.58□□□□□ -0.56
TRAF1-203ENST00000546084 PSMA5P28066 241 aa11.58□□□□□ -0.56
TRAF1-203ENST00000546084 KSR2Q6VAB6 950 aa11.58□□□□□ -0.56
TRAF1-203ENST00000546084 MTERF4Q7Z6M4 381 aaKnown RBP11.58□□□□□ -0.56
TRAF1-203ENST00000546084 VWDEQ8N2E2 1590 aa11.58□□□□□ -0.56
TRAF1-203ENST00000546084 TMX1Q9H3N1 280 aa11.58□□□□□ -0.56
TRAF1-203ENST00000546084 TRMT1Q9NXH9 659 aaKnown RBP11.58□□□□□ -0.56
TRAF1-203ENST00000546084 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.58□□□□□ -0.56
TRAF1-203ENST00000546084 TMEM2Q9UHN6 1383 aa11.58□□□□□ -0.56
TRAF1-203ENST00000546084 RNMTO43148 476 aaKnown RBP11.58□□□□□ -0.56
TRAF1-203ENST00000546084 LARP1Q6PKG0 1096 aaKnown RBP11.58□□□□□ -0.56
TRAF1-203ENST00000546084 KCNH5Q8NCM2 988 aa11.58□□□□□ -0.56
TRAF1-203ENST00000546084 ZHX1Q9UKY1 873 aaPredicted RBP11.58□□□□□ -0.56
TRAF1-203ENST00000546084 ZSCAN22P10073 491 aaPredicted RBP11.57□□□□□ -0.56
TRAF1-203ENST00000546084 CBX1P83916 185 aa11.57□□□□□ -0.56
TRAF1-203ENST00000546084 NOLC1Q14978 699 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRAF1-203ENST00000546084 CCDC57Q2TAC2 916 aa11.57□□□□□ -0.56
TRAF1-203ENST00000546084 TTC39AQ5SRH9 613 aa11.57□□□□□ -0.56
TRAF1-203ENST00000546084 AXIN2Q9Y2T1 843 aa11.57□□□□□ -0.56
TRAF1-203ENST00000546084 COL3A1P02461 1466 aaPredicted RBP11.57□□□□□ -0.56
TRAF1-203ENST00000546084 DEPDC5O75140 1603 aa11.57□□□□□ -0.56
TRAF1-203ENST00000546084 ADAMTS2O95450 1211 aa11.57□□□□□ -0.56
TRAF1-203ENST00000546084 NUP62CLQ9H1M0 184 aa11.57□□□□□ -0.56
TRAF1-203ENST00000546084 DACT1Q9NYF0 836 aa11.57□□□□□ -0.56
TRAF1-203ENST00000546084 A0A0D9SFI3 127 aa11.57□□□□□ -0.56
TRAF1-203ENST00000546084 PLEKHG3A1L390 1219 aa11.57□□□□□ -0.56
TRAF1-203ENST00000546084 TERF1P54274 439 aa11.57□□□□□ -0.56
TRAF1-203ENST00000546084 CCDC73Q6ZRK6 1079 aa11.57□□□□□ -0.56
TRAF1-203ENST00000546084 LUZP1Q86V48 1076 aa11.57□□□□□ -0.56
TRAF1-203ENST00000546084 ERC1Q8IUD2 1116 aa11.57□□□□□ -0.56
TRAF1-203ENST00000546084 C16orf45Q96MC5 204 aaPredicted RBP11.57□□□□□ -0.56
TRAF1-203ENST00000546084 CEP126Q9P2H0 1117 aa11.57□□□□□ -0.56
TRAF1-203ENST00000546084 RAD21O60216 631 aa11.56□□□□□ -0.56
TRAF1-203ENST00000546084 IFIT1P09914 478 aaKnown RBP11.56□□□□□ -0.56
TRAF1-203ENST00000546084 CREB3L3Q68CJ9 461 aa11.56□□□□□ -0.56
TRAF1-203ENST00000546084 TTLL5Q6EMB2 1281 aa11.56□□□□□ -0.56
TRAF1-203ENST00000546084 FAM89AQ96GI7 184 aa11.56□□□□□ -0.56
TRAF1-203ENST00000546084 INO80Q9ULG1 1556 aaPredicted RBP11.56□□□□□ -0.56
TRAF1-203ENST00000546084 CCDC183Q5T5S1 534 aa11.56□□□□□ -0.56
TRAF1-203ENST00000546084 IP6K1Q92551 441 aa11.56□□□□□ -0.56
TRAF1-203ENST00000546084 SGSM2O43147 1006 aa11.56□□□□□ -0.56
TRAF1-203ENST00000546084 APOBRQ0VD83 1088 aa11.56□□□□□ -0.56
TRAF1-203ENST00000546084 ABCF2Q9UG63 623 aa11.56□□□□□ -0.56
TRAF1-203ENST00000546084 MLH3Q9UHC1 1453 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 SMC2O95347 1197 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 TRDNQ13061 729 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 NUP133Q8WUM0 1156 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRAF1-203ENST00000546084 JAG2Q9Y219 1238 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 V9GYY5 206 aaPredicted RBP11.55□□□□□ -0.56
TRAF1-203ENST00000546084 HMGN5P82970 282 aaKnown RBP11.55□□□□□ -0.56
TRAF1-203ENST00000546084 AKAP4Q5JQC9 854 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 Q6ZUG5 572 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 RUFY3Q7L099 469 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 TBC1D2BQ9UPU7 963 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 MYO3AQ8NEV4 1616 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 MROH1Q8NDA8 1641 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 CCDC192P0DO97 292 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 STK38Q15208 465 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 SYNE3Q6ZMZ3 975 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 CDC37L1Q7L3B6 337 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 EVI5LQ96CN4 794 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 INTS4Q96HW7 963 aaKnown RBP11.55□□□□□ -0.56
TRAF1-203ENST00000546084 HYPKQ9NX55 129 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 KIF3AQ9Y496 699 aa11.55□□□□□ -0.56
TRAF1-203ENST00000546084 TTC21AQ8NDW8 1320 aa11.54□□□□□ -0.56
TRAF1-203ENST00000546084 SPDYE4A6NLX3 237 aa11.54□□□□□ -0.56
TRAF1-203ENST00000546084 F13A1P00488 732 aa11.54□□□□□ -0.56
TRAF1-203ENST00000546084 ME3Q16798 604 aa11.54□□□□□ -0.56
TRAF1-203ENST00000546084 CCDC24Q8N4L8 307 aa11.54□□□□□ -0.56
TRAF1-203ENST00000546084 RASSF8Q8NHQ8 419 aa11.54□□□□□ -0.56
TRAF1-203ENST00000546084 FTOQ9C0B1 505 aaKnown RBP eCLIP11.54□□□□□ -0.56
TRAF1-203ENST00000546084 GOLGA6L6A8MZA4 724 aa11.54□□□□□ -0.56
TRAF1-203ENST00000546084 ZNF790Q6PG37 636 aa11.54□□□□□ -0.56
TRAF1-203ENST00000546084 DNAJC25Q9H1X3 360 aa11.54□□□□□ -0.56
TRAF1-203ENST00000546084 SBNO1A3KN83 1393 aa11.54□□□□□ -0.56
TRAF1-203ENST00000546084 CPS1P31327 1500 aa11.54□□□□□ -0.56
TRAF1-203ENST00000546084 KINO60870 393 aaKnown RBP11.53□□□□□ -0.56
TRAF1-203ENST00000546084 ANAPC15P60006 121 aa11.53□□□□□ -0.56
TRAF1-203ENST00000546084 TPD52L1Q16890 204 aaPredicted RBP11.53□□□□□ -0.56
TRAF1-203ENST00000546084 METTL24Q5JXM2 366 aa11.53□□□□□ -0.56
TRAF1-203ENST00000546084 BEND3Q5T5X7 828 aa11.53□□□□□ -0.56
TRAF1-203ENST00000546084 ACSBG1Q96GR2 724 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms