RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 KLK14Q9P0G3 267 aa9.93□□□□□ -0.82
SNHG1-224ENST00000545688 ELOA3CA0A087WX78 387 aaPredicted RBP9.92□□□□□ -0.82
SNHG1-224ENST00000545688 ELOA3DA6NLF2 546 aaPredicted RBP9.92□□□□□ -0.82
SNHG1-224ENST00000545688 SIN3BO75182 1162 aa9.92□□□□□ -0.82
SNHG1-224ENST00000545688 ELOA3BQ3SY89 546 aa9.92□□□□□ -0.82
SNHG1-224ENST00000545688 ELOA3Q8NG57 546 aa9.92□□□□□ -0.82
SNHG1-224ENST00000545688 PRIMPOLQ96LW4 560 aa9.92□□□□□ -0.82
SNHG1-224ENST00000545688 ATG7O95352 703 aa9.91□□□□□ -0.82
SNHG1-224ENST00000545688 COL8A1P27658 744 aa9.91□□□□□ -0.82
SNHG1-224ENST00000545688 FAM69CQ0P6D2 419 aa9.91□□□□□ -0.82
SNHG1-224ENST00000545688 DGKZQ13574 1117 aa9.91□□□□□ -0.82
SNHG1-224ENST00000545688 SWI5Q1ZZU3 235 aa9.91□□□□□ -0.82
SNHG1-224ENST00000545688 GPAT2Q6NUI2 795 aa9.91□□□□□ -0.82
SNHG1-224ENST00000545688 SUV39H2Q9H5I1 410 aa9.91□□□□□ -0.82
SNHG1-224ENST00000545688 DMGDHQ9UI17 866 aaKnown RBP9.91□□□□□ -0.82
SNHG1-224ENST00000545688 GNB5O14775 395 aa9.9□□□□□ -0.82
SNHG1-224ENST00000545688 PRMT3O60678 531 aa9.9□□□□□ -0.82
SNHG1-224ENST00000545688 FKBP5Q13451 457 aaPredicted RBP9.9□□□□□ -0.82
SNHG1-224ENST00000545688 ADARB2-AS1A8MUL3 147 aa9.89□□□□□ -0.83
SNHG1-224ENST00000545688 NEUROD1Q13562 356 aa9.89□□□□□ -0.83
SNHG1-224ENST00000545688 TNFRSF25Q93038 417 aa9.89□□□□□ -0.83
SNHG1-224ENST00000545688 BHMTQ93088 406 aa9.89□□□□□ -0.83
SNHG1-224ENST00000545688 MYO19Q96H55 970 aa9.89□□□□□ -0.83
SNHG1-224ENST00000545688 SERPINA10Q9UK55 444 aa9.89□□□□□ -0.83
SNHG1-224ENST00000545688 ITGB2P05107 769 aa9.88□□□□□ -0.83
SNHG1-224ENST00000545688 ALAS2P22557 587 aa9.88□□□□□ -0.83
SNHG1-224ENST00000545688 OCLNQ16625 522 aa9.88□□□□□ -0.83
SNHG1-224ENST00000545688 PLA2G4EQ3MJ16 856 aa9.88□□□□□ -0.83
SNHG1-224ENST00000545688 TMEM164Q5U3C3 297 aa9.88□□□□□ -0.83
SNHG1-224ENST00000545688 PBXIP1Q96AQ6 731 aa9.88□□□□□ -0.83
SNHG1-224ENST00000545688 PIK3R2O00459 728 aa9.87□□□□□ -0.83
SNHG1-224ENST00000545688 GRNP28799 593 aaKnown RBP9.87□□□□□ -0.83
SNHG1-224ENST00000545688 ADH7P40394 386 aa9.87□□□□□ -0.83
SNHG1-224ENST00000545688 IDH3AP50213 366 aa9.87□□□□□ -0.83
SNHG1-224ENST00000545688 LRFN2Q9ULH4 789 aa9.87□□□□□ -0.83
SNHG1-224ENST00000545688 C11orf91Q3C1V1 193 aa9.86□□□□□ -0.83
SNHG1-224ENST00000545688 STARD13Q9Y3M8 1113 aa9.86□□□□□ -0.83
SNHG1-224ENST00000545688 KRBA1A5PL33 1030 aa9.85□□□□□ -0.83
SNHG1-224ENST00000545688 INPP5BP32019 993 aa9.85□□□□□ -0.83
SNHG1-224ENST00000545688 TRIM11Q96F44 468 aa9.85□□□□□ -0.83
SNHG1-224ENST00000545688 GSX2Q9BZM3 304 aa9.85□□□□□ -0.83
SNHG1-224ENST00000545688 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.85□□□□□ -0.831e-323■■■■□ 19.6
SNHG1-224ENST00000545688 MICAL2O94851 1124 aa9.84□□□□□ -0.83
SNHG1-224ENST00000545688 IGHA1P01876 353 aa9.84□□□□□ -0.83
SNHG1-224ENST00000545688 COX20Q5RI15 118 aa9.84□□□□□ -0.83
SNHG1-224ENST00000545688 ALBP02768 609 aa9.83□□□□□ -0.84
SNHG1-224ENST00000545688 EPB42P16452 691 aa9.83□□□□□ -0.84
SNHG1-224ENST00000545688 ARSDP51689 593 aa9.83□□□□□ -0.84
SNHG1-224ENST00000545688 TBC1D8BQ0IIM8 1120 aa9.83□□□□□ -0.84
SNHG1-224ENST00000545688 CCINQ13939 588 aa9.83□□□□□ -0.84
SNHG1-224ENST00000545688 ALYREFQ86V81 257 aaKnown RBP9.83□□□□□ -0.84
SNHG1-224ENST00000545688 CCDC82Q8N4S0 544 aa9.83□□□□□ -0.84
SNHG1-224ENST00000545688 IFT43Q96FT9 208 aa9.83□□□□□ -0.84
SNHG1-224ENST00000545688 NOP53Q9NZM5 478 aaKnown RBP9.83□□□□□ -0.84
SNHG1-224ENST00000545688 CXXC1Q9P0U4 656 aaPredicted RBP9.83□□□□□ -0.84
SNHG1-224ENST00000545688 M0R082 166 aa9.82□□□□□ -0.84
SNHG1-224ENST00000545688 NFKB1P19838 968 aa9.82□□□□□ -0.84
SNHG1-224ENST00000545688 CAPN12Q6ZSI9 719 aa9.82□□□□□ -0.84
SNHG1-224ENST00000545688 C8orf86Q6ZUL3 223 aa9.82□□□□□ -0.84
SNHG1-224ENST00000545688 ZNF417Q8TAU3 575 aa9.82□□□□□ -0.84
SNHG1-224ENST00000545688 PNMA5Q96PV4 448 aa9.82□□□□□ -0.84
SNHG1-224ENST00000545688 ZNF587Q96SQ5 575 aaPredicted RBP9.82□□□□□ -0.84
SNHG1-224ENST00000545688 MKNK1Q9BUB5 465 aa9.82□□□□□ -0.84
SNHG1-224ENST00000545688 UBE2OQ9C0C9 1292 aaKnown RBP9.82□□□□□ -0.84
SNHG1-224ENST00000545688 SAP130Q9H0E3 1048 aa9.82□□□□□ -0.84
SNHG1-224ENST00000545688 IGFLR1Q9H665 355 aa9.82□□□□□ -0.84
SNHG1-224ENST00000545688 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.82□□□□□ -0.84
SNHG1-224ENST00000545688 MICALL1Q8N3F8 863 aa9.81□□□□□ -0.84
SNHG1-224ENST00000545688 PLVAPQ9BX97 442 aa9.81□□□□□ -0.84
SNHG1-224ENST00000545688 C1orf115Q9H7X2 142 aa9.81□□□□□ -0.84
SNHG1-224ENST00000545688 EFCC1Q9HA90 598 aa9.81□□□□□ -0.84
SNHG1-224ENST00000545688 SLAIN2Q9P270 581 aa9.81□□□□□ -0.84
SNHG1-224ENST00000545688 MSTNO14793 375 aa9.8□□□□□ -0.84
SNHG1-224ENST00000545688 OPLAHO14841 1288 aa9.8□□□□□ -0.84
SNHG1-224ENST00000545688 C14orf37Q86TY3 774 aa9.8□□□□□ -0.84
SNHG1-224ENST00000545688 TREML1Q86YW5 311 aa9.8□□□□□ -0.84
SNHG1-224ENST00000545688 CLP1Q92989 425 aaKnown RBP9.8□□□□□ -0.84
SNHG1-224ENST00000545688 SPOCK3Q9BQ16 436 aa9.8□□□□□ -0.84
SNHG1-224ENST00000545688 SLC6A14Q9UN76 642 aa9.8□□□□□ -0.84
SNHG1-224ENST00000545688 USP20Q9Y2K6 914 aa9.8□□□□□ -0.84
SNHG1-224ENST00000545688 PROCP04070 461 aa9.79□□□□□ -0.84
SNHG1-224ENST00000545688 COL9A3Q14050 684 aaPredicted RBP9.79□□□□□ -0.84
SNHG1-224ENST00000545688 C16orf46Q6P387 395 aa9.79□□□□□ -0.84
SNHG1-224ENST00000545688 KRT25Q7Z3Z0 450 aa9.79□□□□□ -0.84
SNHG1-224ENST00000545688 COL26A1Q96A83 441 aa9.79□□□□□ -0.84
SNHG1-224ENST00000545688 DNAJB12Q9NXW2 375 aaKnown RBP9.79□□□□□ -0.84
SNHG1-224ENST00000545688 C20orf204Q6ZNR8 217 aa9.78□□□□□ -0.84
SNHG1-224ENST00000545688 PRDM6Q9NQX0 595 aa9.78□□□□□ -0.84
SNHG1-224ENST00000545688 ZFATQ9P243 1243 aa9.78□□□□□ -0.84
SNHG1-224ENST00000545688 RTCBQ9Y3I0 505 aaKnown RBP9.78□□□□□ -0.84
SNHG1-224ENST00000545688 NAA30Q147X3 362 aaPredicted RBP9.77□□□□□ -0.85
SNHG1-224ENST00000545688 ETFBKMTQ8IXQ9 262 aa9.77□□□□□ -0.85
SNHG1-224ENST00000545688 TNFRSF10BO14763 440 aa9.76□□□□□ -0.85
SNHG1-224ENST00000545688 SASH3O75995 380 aa9.76□□□□□ -0.85
SNHG1-224ENST00000545688 TARSP26639 723 aaKnown RBP9.76□□□□□ -0.85
SNHG1-224ENST00000545688 FAM26DQ5JW98 314 aa9.76□□□□□ -0.85
SNHG1-224ENST00000545688 RGL4Q8IZJ4 473 aa9.76□□□□□ -0.85
SNHG1-224ENST00000545688 NAGPAQ9UK23 515 aa9.76□□□□□ -0.85
SNHG1-224ENST00000545688 MAP3K6O95382 1288 aa9.75□□□□□ -0.85
SNHG1-224ENST00000545688 NID1P14543 1247 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms