RNA–Protein interactions for RNA: ENST00000545328.6

SEC23A-203, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-203ENST00000545328 CREB3L3Q68CJ9 461 aa20.25■□□□□ 0.83
SEC23A-203ENST00000545328 GRM8O00222 908 aa20.24■□□□□ 0.83
SEC23A-203ENST00000545328 GCP02774 474 aa20.24■□□□□ 0.83
SEC23A-203ENST00000545328 CHGBP05060 677 aa20.24■□□□□ 0.83
SEC23A-203ENST00000545328 HOXB7P09629 217 aa20.24■□□□□ 0.83
SEC23A-203ENST00000545328 RIC3Q7Z5B4 369 aa20.24■□□□□ 0.83
SEC23A-203ENST00000545328 AXIN2Q9Y2T1 843 aa20.24■□□□□ 0.83
SEC23A-203ENST00000545328 CAMK4Q16566 473 aa20.24■□□□□ 0.83
SEC23A-203ENST00000545328 PDE4CQ08493 712 aa20.23■□□□□ 0.83
SEC23A-203ENST00000545328 EVI5LQ96CN4 794 aa20.23■□□□□ 0.83
SEC23A-203ENST00000545328 ZC3H6P61129 1189 aaKnown RBP20.23■□□□□ 0.83
SEC23A-203ENST00000545328 KIAA2012Q0VF49 1180 aa20.23■□□□□ 0.83
SEC23A-203ENST00000545328 VPS53Q5VIR6 699 aa20.23■□□□□ 0.83
SEC23A-203ENST00000545328 LARP1BQ659C4 914 aaKnown RBP20.22■□□□□ 0.83
SEC23A-203ENST00000545328 CDC37L1Q7L3B6 337 aa20.22■□□□□ 0.83
SEC23A-203ENST00000545328 ZSWIM6Q9HCJ5 1215 aa20.22■□□□□ 0.83
SEC23A-203ENST00000545328 NECTIN1Q15223 517 aa20.22■□□□□ 0.83
SEC23A-203ENST00000545328 EPB41L2O43491 1005 aaKnown RBP20.21■□□□□ 0.83
SEC23A-203ENST00000545328 MTX1Q13505 466 aa20.21■□□□□ 0.83
SEC23A-203ENST00000545328 TMEM87AQ8NBN3 555 aa20.21■□□□□ 0.83
SEC23A-203ENST00000545328 SPC24Q8NBT2 197 aa20.21■□□□□ 0.83
SEC23A-203ENST00000545328 KCNH5Q8NCM2 988 aa20.21■□□□□ 0.83
SEC23A-203ENST00000545328 ATP6V1DQ9Y5K8 247 aa20.21■□□□□ 0.83
SEC23A-203ENST00000545328 KDM3BQ7LBC6 1761 aa20.21■□□□□ 0.83
SEC23A-203ENST00000545328 ALDH1L1O75891 902 aa20.21■□□□□ 0.83
SEC23A-203ENST00000545328 ZNF589Q86UQ0 364 aaPredicted RBP20.21■□□□□ 0.83
SEC23A-203ENST00000545328 TSC1Q92574 1164 aa20.21■□□□□ 0.83
SEC23A-203ENST00000545328 TFIP11Q9UBB9 837 aaKnown RBP20.21■□□□□ 0.83
SEC23A-203ENST00000545328 USP42Q9H9J4 1324 aaKnown RBP20.21■□□□□ 0.83
SEC23A-203ENST00000545328 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.2■□□□□ 0.82
SEC23A-203ENST00000545328 SLC27A2O14975 620 aa20.2■□□□□ 0.82
SEC23A-203ENST00000545328 ERC1Q8IUD2 1116 aa20.2■□□□□ 0.82
SEC23A-203ENST00000545328 EPHA10Q5JZY3 1008 aa20.2■□□□□ 0.82
SEC23A-203ENST00000545328 CSPP1Q1MSJ5 1256 aa20.19■□□□□ 0.82
SEC23A-203ENST00000545328 LINS1Q8NG48 757 aa20.19■□□□□ 0.82
SEC23A-203ENST00000545328 MYD88Q99836 296 aa20.19■□□□□ 0.82
SEC23A-203ENST00000545328 NFAT5O94916 1531 aa20.19■□□□□ 0.82
SEC23A-203ENST00000545328 IGKV5-2P06315 115 aa20.19■□□□□ 0.82
SEC23A-203ENST00000545328 FOSBP53539 338 aa20.19■□□□□ 0.82
SEC23A-203ENST00000545328 FER1L4A9Z1Z3 1794 aa20.19■□□□□ 0.82
SEC23A-203ENST00000545328 AMOTQ4VCS5 1084 aa20.18■□□□□ 0.82
SEC23A-203ENST00000545328 MED1Q15648 1581 aaPredicted RBP20.18■□□□□ 0.82
SEC23A-203ENST00000545328 FAM177BA6PVY3 158 aa20.18■□□□□ 0.82
SEC23A-203ENST00000545328 AP5Z1O43299 807 aa20.18■□□□□ 0.82
SEC23A-203ENST00000545328 MCM5P33992 734 aa20.18■□□□□ 0.82
SEC23A-203ENST00000545328 TTC6Q86TZ1 520 aa20.18■□□□□ 0.82
SEC23A-203ENST00000545328 PPFIA3O75145 1194 aa20.18■□□□□ 0.82
SEC23A-203ENST00000545328 BLOC1S2Q6QNY1 142 aa20.18■□□□□ 0.82
SEC23A-203ENST00000545328 CKAP2LQ8IYA6 745 aa20.18■□□□□ 0.82
SEC23A-203ENST00000545328 FAM184AQ8NB25 1140 aa20.18■□□□□ 0.82
SEC23A-203ENST00000545328 XAGE3Q8WTP9 111 aa20.18■□□□□ 0.82
SEC23A-203ENST00000545328 DDX58O95786 925 aaKnown RBP20.17■□□□□ 0.82
SEC23A-203ENST00000545328 CCDC129Q6ZRS4 1044 aa20.17■□□□□ 0.82
SEC23A-203ENST00000545328 ARHGEF25Q86VW2 580 aa20.17■□□□□ 0.82
SEC23A-203ENST00000545328 ZSCAN31Q96LW9 406 aaPredicted RBP20.17■□□□□ 0.82
SEC23A-203ENST00000545328 SH2B1Q9NRF2 756 aaPredicted RBP20.17■□□□□ 0.82
SEC23A-203ENST00000545328 COPS6Q7L5N1 327 aa20.17■□□□□ 0.82
SEC23A-203ENST00000545328 MAP4K1Q92918 833 aa20.17■□□□□ 0.82
SEC23A-203ENST00000545328 DNAJC2Q99543 621 aaKnown RBP20.17■□□□□ 0.82
SEC23A-203ENST00000545328 CHMP4AQ9BY43 222 aa20.17■□□□□ 0.82
SEC23A-203ENST00000545328 LIG1P18858 919 aa20.16■□□□□ 0.82
SEC23A-203ENST00000545328 LRRC2Q9BYS8 371 aa20.16■□□□□ 0.82
SEC23A-203ENST00000545328 PDCL3Q9H2J4 239 aa20.16■□□□□ 0.82
SEC23A-203ENST00000545328 NFATC2IPQ8NCF5 419 aa20.16■□□□□ 0.82
SEC23A-203ENST00000545328 DDX21Q9NR30 783 aaKnown RBP eCLIP20.16■□□□□ 0.82
SEC23A-203ENST00000545328 NLRP2Q9NX02 1062 aa20.16■□□□□ 0.82
SEC23A-203ENST00000545328 ATP5J2-PTCD1G3V325 749 aa20.15■□□□□ 0.82
SEC23A-203ENST00000545328 PTCD1O75127 700 aaKnown RBP20.15■□□□□ 0.82
SEC23A-203ENST00000545328 KDM4AO75164 1064 aa20.15■□□□□ 0.82
SEC23A-203ENST00000545328 PDIA6Q15084 440 aa20.15■□□□□ 0.82
SEC23A-203ENST00000545328 LARP1Q6PKG0 1096 aaKnown RBP20.15■□□□□ 0.82
SEC23A-203ENST00000545328 DDX11Q96FC9 970 aa20.15■□□□□ 0.82
SEC23A-203ENST00000545328 SEC62Q99442 399 aaKnown RBP20.15■□□□□ 0.82
SEC23A-203ENST00000545328 SASS6Q6UVJ0 657 aa20.15■□□□□ 0.82
SEC23A-203ENST00000545328 ANKLE2Q86XL3 938 aa20.15■□□□□ 0.82
SEC23A-203ENST00000545328 TM6SF1Q9BZW5 370 aa20.14■□□□□ 0.82
SEC23A-203ENST00000545328 JAK2O60674 1132 aa20.14■□□□□ 0.81
SEC23A-203ENST00000545328 NEXNQ0ZGT2 675 aa20.14■□□□□ 0.81
SEC23A-203ENST00000545328 SLFNL1Q499Z3 407 aa20.14■□□□□ 0.81
SEC23A-203ENST00000545328 KRT85P78386 507 aa20.13■□□□□ 0.81
SEC23A-203ENST00000545328 NOLC1Q14978 699 aaKnown RBP eCLIP20.13■□□□□ 0.815e-8■□□□□ 10.4
SEC23A-203ENST00000545328 UVSSAQ2YD98 709 aa20.13■□□□□ 0.81
SEC23A-203ENST00000545328 DDX17Q92841 729 aaKnown RBP20.13■□□□□ 0.81
SEC23A-203ENST00000545328 LETM1O95202 739 aaPredicted RBP20.13■□□□□ 0.81
SEC23A-203ENST00000545328 CEBPZQ03701 1054 aaKnown RBP20.13■□□□□ 0.81
SEC23A-203ENST00000545328 ZNF790Q6PG37 636 aa20.13■□□□□ 0.81
SEC23A-203ENST00000545328 GOLGA6L4A6NEF3 574 aa20.12■□□□□ 0.81
SEC23A-203ENST00000545328 NEURL1BA8MQ27 555 aa20.12■□□□□ 0.81
SEC23A-203ENST00000545328 HSP90B1P14625 803 aaKnown RBP20.12■□□□□ 0.81
SEC23A-203ENST00000545328 PSMA5P28066 241 aa20.12■□□□□ 0.81
SEC23A-203ENST00000545328 UBE3BQ7Z3V4 1068 aa20.12■□□□□ 0.81
SEC23A-203ENST00000545328 FUCA2Q9BTY2 467 aa20.12■□□□□ 0.81
SEC23A-203ENST00000545328 CRYBG1Q9Y4K1 1723 aa20.12■□□□□ 0.81
SEC23A-203ENST00000545328 TFCP2Q12800 502 aa20.12■□□□□ 0.81
SEC23A-203ENST00000545328 TOB2Q14106 344 aaPredicted RBP20.12■□□□□ 0.81
SEC23A-203ENST00000545328 USP16Q9Y5T5 823 aa20.12■□□□□ 0.81
SEC23A-203ENST00000545328 LMO7Q8WWI1 1683 aa20.12■□□□□ 0.81
SEC23A-203ENST00000545328 RNF20Q5VTR2 975 aa20.11■□□□□ 0.81
SEC23A-203ENST00000545328 DDX46Q7L014 1031 aaKnown RBP20.11■□□□□ 0.81
SEC23A-203ENST00000545328 LUZP1Q86V48 1076 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms