RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 VEGFAP15692 232 aaPredicted RBP5.85□□□□□ -1.47
CNGA1-209ENST00000544810 CLK2P49760 499 aaKnown RBP5.85□□□□□ -1.47
CNGA1-209ENST00000544810 EVX2Q03828 476 aa5.85□□□□□ -1.47
CNGA1-209ENST00000544810 NAP1L5Q96NT1 182 aaPredicted RBP5.85□□□□□ -1.47
CNGA1-209ENST00000544810 ZC3H4Q9UPT8 1303 aaKnown RBP5.85□□□□□ -1.47
CNGA1-209ENST00000544810 CNTNAP1P78357 1384 aa5.85□□□□□ -1.47
CNGA1-209ENST00000544810 MAP3K7O43318 606 aa5.84□□□□□ -1.47
CNGA1-209ENST00000544810 LBX1P52954 281 aa5.84□□□□□ -1.47
CNGA1-209ENST00000544810 FGD1P98174 961 aa5.84□□□□□ -1.47
CNGA1-209ENST00000544810 FAM217BQ9NTX9 383 aaPredicted RBP5.84□□□□□ -1.47
CNGA1-209ENST00000544810 LIMD1Q9UGP4 676 aa5.84□□□□□ -1.47
CNGA1-209ENST00000544810 TBC1D2BQ9UPU7 963 aa5.84□□□□□ -1.47
CNGA1-209ENST00000544810 FRAT2O75474 233 aaPredicted RBP5.84□□□□□ -1.47
CNGA1-209ENST00000544810 KCNA3P22001 575 aa5.84□□□□□ -1.47
CNGA1-209ENST00000544810 TERF1P54274 439 aa5.84□□□□□ -1.47
CNGA1-209ENST00000544810 MAP7D2Q96T17 732 aa5.84□□□□□ -1.47
CNGA1-209ENST00000544810 UBR3Q6ZT12 1888 aa5.84□□□□□ -1.47
CNGA1-209ENST00000544810 N4BP2Q86UW6 1770 aaPredicted RBP5.84□□□□□ -1.47
CNGA1-209ENST00000544810 FAM208AQ9UK61 1670 aaKnown RBP5.84□□□□□ -1.47
CNGA1-209ENST00000544810 KDM6AO15550 1401 aaPredicted RBP5.84□□□□□ -1.48
CNGA1-209ENST00000544810 TAF1LQ8IZX4 1826 aa5.83□□□□□ -1.48
CNGA1-209ENST00000544810 FSD2A1L4K1 749 aa5.83□□□□□ -1.48
CNGA1-209ENST00000544810 HSPA8P11142 646 aaKnown RBP5.83□□□□□ -1.48
CNGA1-209ENST00000544810 PDCD7Q8N8D1 485 aaKnown RBP5.83□□□□□ -1.48
CNGA1-209ENST00000544810 CCDC87Q9NVE4 849 aa5.83□□□□□ -1.48
CNGA1-209ENST00000544810 PRDM4Q9UKN5 801 aa5.83□□□□□ -1.48
CNGA1-209ENST00000544810 ROCK2O75116 1388 aaKnown RBP5.83□□□□□ -1.48
CNGA1-209ENST00000544810 GLTPD2A6NH11 291 aa5.83□□□□□ -1.48
CNGA1-209ENST00000544810 CCDC85CA6NKD9 419 aa5.83□□□□□ -1.48
CNGA1-209ENST00000544810 LINC00116Q8NCU8 138 aa5.83□□□□□ -1.48
CNGA1-209ENST00000544810 SMARCC1Q92922 1105 aaPredicted RBP5.83□□□□□ -1.48
CNGA1-209ENST00000544810 WBP1LQ9NX94 342 aa5.83□□□□□ -1.48
CNGA1-209ENST00000544810 RBM10P98175 930 aaKnown RBP5.83□□□□□ -1.48
CNGA1-209ENST00000544810 NBPF1Q3BBV0 1214 aa5.83□□□□□ -1.48
CNGA1-209ENST00000544810 DALRD3Q5D0E6 543 aaKnown RBP5.83□□□□□ -1.48
CNGA1-209ENST00000544810 TMEM92Q6UXU6 159 aa5.83□□□□□ -1.48
CNGA1-209ENST00000544810 NME9Q86XW9 330 aa5.83□□□□□ -1.48
CNGA1-209ENST00000544810 EXOC6Q8TAG9 804 aa5.83□□□□□ -1.48
CNGA1-209ENST00000544810 IP6K1Q92551 441 aa5.83□□□□□ -1.48
CNGA1-209ENST00000544810 LTV1Q96GA3 475 aaPredicted RBP5.83□□□□□ -1.48
CNGA1-209ENST00000544810 TBC1D2Q9BYX2 928 aa5.83□□□□□ -1.48
CNGA1-209ENST00000544810 BMP2KQ9NSY1 1161 aaPredicted RBP5.83□□□□□ -1.48
CNGA1-209ENST00000544810 PIM2Q9P1W9 311 aa5.83□□□□□ -1.48
CNGA1-209ENST00000544810 EVC2Q86UK5 1308 aa5.82□□□□□ -1.48
CNGA1-209ENST00000544810 LTN1O94822 1766 aa5.82□□□□□ -1.48
CNGA1-209ENST00000544810 MAMSTRQ6ZN01 415 aa5.82□□□□□ -1.48
CNGA1-209ENST00000544810 BRCA1P38398 1863 aaKnown RBP5.82□□□□□ -1.48
CNGA1-209ENST00000544810 C4AP0C0L4 1744 aa5.82□□□□□ -1.48
CNGA1-209ENST00000544810 METTL3Q86U44 580 aaKnown RBP5.82□□□□□ -1.48
CNGA1-209ENST00000544810 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.82□□□□□ -1.48
CNGA1-209ENST00000544810 NLGN1Q8N2Q7 840 aa5.82□□□□□ -1.48
CNGA1-209ENST00000544810 PNISRQ8TF01 805 aaKnown RBP5.82□□□□□ -1.48
CNGA1-209ENST00000544810 RCAN3Q9UKA8 241 aa5.82□□□□□ -1.48
CNGA1-209ENST00000544810 ARFGEF1Q9Y6D6 1849 aa5.82□□□□□ -1.48
CNGA1-209ENST00000544810 POTECB2RU33 542 aa5.81□□□□□ -1.48
CNGA1-209ENST00000544810 VEGFBP49765 207 aa5.81□□□□□ -1.48
CNGA1-209ENST00000544810 RASSF7Q02833 373 aa5.81□□□□□ -1.48
CNGA1-209ENST00000544810 MPRIPQ6WCQ1 1025 aa5.81□□□□□ -1.48
CNGA1-209ENST00000544810 SBNO2Q9Y2G9 1366 aa5.81□□□□□ -1.48
CNGA1-209ENST00000544810 CGNL1Q0VF96 1302 aa5.81□□□□□ -1.48
CNGA1-209ENST00000544810 KIF7Q2M1P5 1343 aa5.81□□□□□ -1.48
CNGA1-209ENST00000544810 KAT6BQ8WYB5 2073 aa5.81□□□□□ -1.48
CNGA1-209ENST00000544810 TMF1P82094 1093 aa5.81□□□□□ -1.48
CNGA1-209ENST00000544810 CENPQQ7L2Z9 268 aaPredicted RBP5.81□□□□□ -1.48
CNGA1-209ENST00000544810 MON2Q7Z3U7 1717 aa5.81□□□□□ -1.48
CNGA1-209ENST00000544810 BOLA1Q9Y3E2 137 aa5.81□□□□□ -1.48
CNGA1-209ENST00000544810 LOC102724428A0A0B4J2F2 783 aa5.8□□□□□ -1.48
CNGA1-209ENST00000544810 SIK1P57059 783 aa5.8□□□□□ -1.48
CNGA1-209ENST00000544810 ITPK1Q13572 414 aa5.8□□□□□ -1.48
CNGA1-209ENST00000544810 PCDH11XQ9BZA7 1347 aa5.8□□□□□ -1.48
CNGA1-209ENST00000544810 PCDH11YQ9BZA8 1340 aa5.8□□□□□ -1.48
CNGA1-209ENST00000544810 GOLGA6L3A6NEY3 463 aa5.8□□□□□ -1.48
CNGA1-209ENST00000544810 E9PSI1 815 aa5.8□□□□□ -1.48
CNGA1-209ENST00000544810 LMNB1P20700 586 aa5.8□□□□□ -1.48
CNGA1-209ENST00000544810 MRE11P49959 708 aa5.8□□□□□ -1.48
CNGA1-209ENST00000544810 QPCTQ16769 361 aa5.8□□□□□ -1.48
CNGA1-209ENST00000544810 C8orf34Q49A92 452 aa5.8□□□□□ -1.48
CNGA1-209ENST00000544810 MTERF4Q7Z6M4 381 aaKnown RBP5.8□□□□□ -1.48
CNGA1-209ENST00000544810 SMAP1Q8IYB5 467 aaPredicted RBP5.8□□□□□ -1.48
CNGA1-209ENST00000544810 ADAMTS19Q8TE59 1207 aa5.8□□□□□ -1.48
CNGA1-209ENST00000544810 PARP3Q9Y6F1 533 aa5.8□□□□□ -1.48
CNGA1-209ENST00000544810 CD163L1Q9NR16 1453 aa5.8□□□□□ -1.48
CNGA1-209ENST00000544810 XRCC6P12956 609 aaKnown RBP eCLIP5.79□□□□□ -1.48
CNGA1-209ENST00000544810 GYS1P13807 737 aa5.79□□□□□ -1.48
CNGA1-209ENST00000544810 PIGBQ92521 554 aa5.79□□□□□ -1.48
CNGA1-209ENST00000544810 PASKQ96RG2 1323 aa5.79□□□□□ -1.48
CNGA1-209ENST00000544810 NCLP19338 710 aaKnown RBP5.79□□□□□ -1.48
CNGA1-209ENST00000544810 CHRNA5P30532 468 aa5.79□□□□□ -1.48
CNGA1-209ENST00000544810 HOXC9P31274 260 aa5.79□□□□□ -1.48
CNGA1-209ENST00000544810 BECN1Q14457 450 aa5.79□□□□□ -1.48
CNGA1-209ENST00000544810 DCBLD2Q96PD2 775 aa5.79□□□□□ -1.48
CNGA1-209ENST00000544810 MAP2P11137 1827 aaKnown RBP5.79□□□□□ -1.48
CNGA1-209ENST00000544810 MAP3K19Q56UN5 1328 aa5.79□□□□□ -1.48
CNGA1-209ENST00000544810 PDE4CQ08493 712 aa5.78□□□□□ -1.48
CNGA1-209ENST00000544810 CDCA8Q53HL2 280 aa5.78□□□□□ -1.48
CNGA1-209ENST00000544810 TRAPPC3LQ5T215 181 aa5.78□□□□□ -1.48
CNGA1-209ENST00000544810 RAPGEF4Q8WZA2 1011 aa5.78□□□□□ -1.48
CNGA1-209ENST00000544810 ESPNB1AK53 854 aa5.78□□□□□ -1.48
CNGA1-209ENST00000544810 CYP27B1O15528 508 aa5.78□□□□□ -1.48
CNGA1-209ENST00000544810 AP1G2O75843 785 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms