RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 GAS6Q14393 721 aa4.31□□□□□ -1.72
YBX3-214ENST00000544501 FAM26DQ5JW98 314 aa4.31□□□□□ -1.72
YBX3-214ENST00000544501 LCE2AQ5TA79 106 aaPredicted RBP4.31□□□□□ -1.72
YBX3-214ENST00000544501 GLYCTKQ8IVS8 523 aa4.31□□□□□ -1.72
YBX3-214ENST00000544501 COL25A1Q9BXS0 654 aaPredicted RBP4.31□□□□□ -1.72
YBX3-214ENST00000544501 TUT1Q9H6E5 874 aaKnown RBP4.31□□□□□ -1.72
YBX3-214ENST00000544501 MBIPQ9NS73 344 aa4.31□□□□□ -1.72
YBX3-214ENST00000544501 NSFL1CQ9UNZ2 370 aaKnown RBP4.31□□□□□ -1.72
YBX3-214ENST00000544501 KCNH4Q9UQ05 1017 aa4.31□□□□□ -1.72
YBX3-214ENST00000544501 EGFRP00533 1210 aa4.3□□□□□ -1.72
YBX3-214ENST00000544501 MX2P20592 715 aa4.3□□□□□ -1.72
YBX3-214ENST00000544501 MAP2K3P46734 347 aa4.3□□□□□ -1.72
YBX3-214ENST00000544501 EIF1AXP47813 144 aaKnown RBP4.3□□□□□ -1.72
YBX3-214ENST00000544501 SRSF11Q05519 484 aaKnown RBP4.3□□□□□ -1.72
YBX3-214ENST00000544501 SFSWAPQ12872 951 aaKnown RBP4.3□□□□□ -1.72
YBX3-214ENST00000544501 ZNF211Q13398 564 aaPredicted RBP4.3□□□□□ -1.72
YBX3-214ENST00000544501 MTMR3Q13615 1198 aa4.3□□□□□ -1.72
YBX3-214ENST00000544501 ECM1Q16610 540 aa4.3□□□□□ -1.72
YBX3-214ENST00000544501 PIK3R5Q8WYR1 880 aa4.3□□□□□ -1.72
YBX3-214ENST00000544501 ANO2Q9NQ90 1003 aa4.3□□□□□ -1.72
YBX3-214ENST00000544501 AVENQ9NQS1 362 aaPredicted RBP4.3□□□□□ -1.72
YBX3-214ENST00000544501 HCN2Q9UL51 889 aa4.3□□□□□ -1.72
YBX3-214ENST00000544501 RTCBQ9Y3I0 505 aaKnown RBP4.3□□□□□ -1.72
YBX3-214ENST00000544501 ZBTB7CA1YPR0 619 aa4.29□□□□□ -1.72
YBX3-214ENST00000544501 BMP4P12644 408 aa4.29□□□□□ -1.72
YBX3-214ENST00000544501 PCSK2P16519 638 aa4.29□□□□□ -1.72
YBX3-214ENST00000544501 CD33P20138 364 aa4.29□□□□□ -1.72
YBX3-214ENST00000544501 MZF1P28698 734 aaPredicted RBP4.29□□□□□ -1.72
YBX3-214ENST00000544501 GMPRP36959 345 aa4.29□□□□□ -1.72
YBX3-214ENST00000544501 USP5P45974 858 aa4.29□□□□□ -1.72
YBX3-214ENST00000544501 ARHGAP4P98171 946 aa4.29□□□□□ -1.72
YBX3-214ENST00000544501 CTBSQ01459 385 aa4.29□□□□□ -1.72
YBX3-214ENST00000544501 NEUROD1Q13562 356 aa4.29□□□□□ -1.72
YBX3-214ENST00000544501 RNFT1Q5M7Z0 435 aa4.29□□□□□ -1.72
YBX3-214ENST00000544501 LCE2CQ5TA81 110 aa4.29□□□□□ -1.72
YBX3-214ENST00000544501 CITED4Q96RK1 184 aa4.29□□□□□ -1.72
YBX3-214ENST00000544501 STRN4Q9NRL3 753 aa4.29□□□□□ -1.72
YBX3-214ENST00000544501 FNDC3AQ9Y2H6 1198 aaKnown RBP4.29□□□□□ -1.72
YBX3-214ENST00000544501 WIPF1O43516 503 aa4.28□□□□□ -1.72
YBX3-214ENST00000544501 SLURP2P0DP57 97 aa4.28□□□□□ -1.72
YBX3-214ENST00000544501 ARAFP10398 606 aa4.28□□□□□ -1.72
YBX3-214ENST00000544501 GRNP28799 593 aaKnown RBP4.28□□□□□ -1.72
YBX3-214ENST00000544501 KRT76Q01546 638 aa4.28□□□□□ -1.72
YBX3-214ENST00000544501 SPEM2Q0P670 501 aa4.28□□□□□ -1.72
YBX3-214ENST00000544501 AAMPQ13685 434 aa4.28□□□□□ -1.72
YBX3-214ENST00000544501 CCINQ13939 588 aa4.28□□□□□ -1.72
YBX3-214ENST00000544501 ZNF468Q5VIY5 522 aaPredicted RBP4.28□□□□□ -1.72
YBX3-214ENST00000544501 RGL4Q8IZJ4 473 aa4.28□□□□□ -1.72
YBX3-214ENST00000544501 GSX2Q9BZM3 304 aa4.28□□□□□ -1.72
YBX3-214ENST00000544501 LRRC4BQ9NT99 713 aa4.28□□□□□ -1.72
YBX3-214ENST00000544501 KCNMB2Q9Y691 235 aa4.28□□□□□ -1.72
YBX3-214ENST00000544501 IGF1RP08069 1367 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 C2CD2LO14523 706 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 NDUFB5O43674 189 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 FZD6O60353 706 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 XYLBO75191 536 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 MAP3K6O95382 1288 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 PDGFAP04085 211 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 DNM1Q05193 864 aaKnown RBP4.27□□□□□ -1.73
YBX3-214ENST00000544501 EHHADHQ08426 723 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 PDE12Q6L8Q7 609 aaKnown RBP4.27□□□□□ -1.73
YBX3-214ENST00000544501 XKR5Q6UX68 686 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 SND1Q7KZF4 910 aaKnown RBP eCLIP4.27□□□□□ -1.73
YBX3-214ENST00000544501 ATCAYQ86WG3 371 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 CMTR1Q8N1G2 835 aaKnown RBP4.27□□□□□ -1.73
YBX3-214ENST00000544501 TTC16Q8NEE8 873 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 GPR152Q8TDT2 470 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 EDEM1Q92611 657 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 NUDT16Q96DE0 195 aaKnown RBP4.27□□□□□ -1.73
YBX3-214ENST00000544501 CNTNAP3BQ96NU0 1288 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 SLC30A3Q99726 388 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 CNTNAP3Q9BZ76 1288 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 BIN2Q9UBW5 565 aaPredicted RBP4.27□□□□□ -1.73
YBX3-214ENST00000544501 GDF2Q9UK05 429 aaPredicted RBP4.27□□□□□ -1.73
YBX3-214ENST00000544501 BRPF3Q9ULD4 1205 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 PRR12Q9ULL5 1215 aa4.27□□□□□ -1.73
YBX3-214ENST00000544501 SIN3BO75182 1162 aa4.26□□□□□ -1.73
YBX3-214ENST00000544501 ADAMTS2O95450 1211 aa4.26□□□□□ -1.73
YBX3-214ENST00000544501 ADH6P28332 368 aa4.26□□□□□ -1.73
YBX3-214ENST00000544501 NLRP13Q86W25 1043 aa4.26□□□□□ -1.73
YBX3-214ENST00000544501 GJD3Q8N144 294 aa4.26□□□□□ -1.73
YBX3-214ENST00000544501 GOLGA6L1Q8N7Z2 621 aa4.26□□□□□ -1.73
YBX3-214ENST00000544501 PNMA5Q96PV4 448 aa4.26□□□□□ -1.73
YBX3-214ENST00000544501 OXCT2Q9BYC2 517 aaPredicted RBP4.26□□□□□ -1.73
YBX3-214ENST00000544501 POLIQ9UNA4 740 aa4.26□□□□□ -1.73
YBX3-214ENST00000544501 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.26□□□□□ -1.73
YBX3-214ENST00000544501 UBAP1LF5GYI3 381 aa4.25□□□□□ -1.73
YBX3-214ENST00000544501 PDE3BQ13370 1112 aa4.25□□□□□ -1.73
YBX3-214ENST00000544501 GRIN2CQ14957 1233 aa4.25□□□□□ -1.73
YBX3-214ENST00000544501 TRIP4Q15650 581 aaPredicted RBP4.25□□□□□ -1.73
YBX3-214ENST00000544501 PCSK7Q16549 785 aa4.25□□□□□ -1.73
YBX3-214ENST00000544501 SYT9Q86SS6 491 aa4.25□□□□□ -1.73
YBX3-214ENST00000544501 TNFRSF25Q93038 417 aa4.25□□□□□ -1.73
YBX3-214ENST00000544501 RBCK1Q9BYM8 510 aa4.25□□□□□ -1.73
YBX3-214ENST00000544501 GZF1Q9H116 711 aaPredicted RBP4.25□□□□□ -1.73
YBX3-214ENST00000544501 CCDC87Q9NVE4 849 aa4.25□□□□□ -1.73
YBX3-214ENST00000544501 DCTN4Q9UJW0 460 aa4.25□□□□□ -1.73
YBX3-214ENST00000544501 USP20Q9Y2K6 914 aa4.25□□□□□ -1.73
YBX3-214ENST00000544501 ADARB2-AS1A8MUL3 147 aa4.24□□□□□ -1.73
YBX3-214ENST00000544501 SASH3O75995 380 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms