RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 TCP11L1Q9NUJ3 509 aa11.91□□□□□ -0.5
PCDH9-204ENST00000544246 TTLL12Q14166 644 aaPredicted RBP11.91□□□□□ -0.5
PCDH9-204ENST00000544246 BICD1Q96G01 975 aa11.91□□□□□ -0.5
PCDH9-204ENST00000544246 DDX19AQ9NUU7 478 aaKnown RBP11.91□□□□□ -0.5
PCDH9-204ENST00000544246 KIF14Q15058 1648 aa11.91□□□□□ -0.5
PCDH9-204ENST00000544246 RANBP6O60518 1105 aaKnown RBP11.91□□□□□ -0.5
PCDH9-204ENST00000544246 RAB11FIP3O75154 756 aa11.91□□□□□ -0.5
PCDH9-204ENST00000544246 FSIP1Q8NA03 581 aa11.91□□□□□ -0.5
PCDH9-204ENST00000544246 CDK13Q14004 1512 aaKnown RBP11.91□□□□□ -0.5
PCDH9-204ENST00000544246 ADAMTS12P58397 1594 aa11.91□□□□□ -0.5
PCDH9-204ENST00000544246 WDR63Q8IWG1 891 aa11.91□□□□□ -0.5
PCDH9-204ENST00000544246 ODF2LQ9ULJ1 636 aa11.91□□□□□ -0.5
PCDH9-204ENST00000544246 OPA1O60313 960 aa11.91□□□□□ -0.5
PCDH9-204ENST00000544246 IFIT1P09914 478 aaKnown RBP11.91□□□□□ -0.5
PCDH9-204ENST00000544246 RPAP2Q8IXW5 612 aaPredicted RBP11.91□□□□□ -0.5
PCDH9-204ENST00000544246 SELENOOQ9BVL4 669 aa11.91□□□□□ -0.5
PCDH9-204ENST00000544246 RNF41Q9H4P4 317 aaPredicted RBP11.91□□□□□ -0.5
PCDH9-204ENST00000544246 KIF3CO14782 793 aa11.9□□□□□ -0.5
PCDH9-204ENST00000544246 GUCY1B3Q02153 619 aa11.9□□□□□ -0.5
PCDH9-204ENST00000544246 CATIPQ7Z7H3 387 aa11.9□□□□□ -0.5
PCDH9-204ENST00000544246 PAXBP1Q9Y5B6 917 aa11.9□□□□□ -0.5
PCDH9-204ENST00000544246 NCOA2Q15596 1464 aa11.9□□□□□ -0.5
PCDH9-204ENST00000544246 SH3BP5O60239 455 aa11.9□□□□□ -0.5
PCDH9-204ENST00000544246 SLF2Q8IX21 1173 aa11.9□□□□□ -0.5
PCDH9-204ENST00000544246 CA8P35219 290 aa11.9□□□□□ -0.5
PCDH9-204ENST00000544246 ZBTB16Q05516 673 aa11.9□□□□□ -0.5
PCDH9-204ENST00000544246 KANK3Q6NY19 840 aa11.9□□□□□ -0.5
PCDH9-204ENST00000544246 CCDC121Q6ZUS5 278 aa11.9□□□□□ -0.5
PCDH9-204ENST00000544246 STX6O43752 255 aa11.9□□□□□ -0.5
PCDH9-204ENST00000544246 MPHOSPH6Q99547 160 aaKnown RBP11.9□□□□□ -0.5
PCDH9-204ENST00000544246 PRPHP41219 470 aa11.9□□□□□ -0.51
PCDH9-204ENST00000544246 CCDC129Q6ZRS4 1044 aa11.9□□□□□ -0.51
PCDH9-204ENST00000544246 RSPH14Q9UHP6 348 aa11.9□□□□□ -0.51
PCDH9-204ENST00000544246 ZNF652Q9Y2D9 606 aa11.9□□□□□ -0.51
PCDH9-204ENST00000544246 CKAP2LQ8IYA6 745 aa11.89□□□□□ -0.51
PCDH9-204ENST00000544246 CCDC85AQ96PX6 553 aaPredicted RBP11.89□□□□□ -0.51
PCDH9-204ENST00000544246 UTP14AQ9BVJ6 771 aaKnown RBP11.89□□□□□ -0.51
PCDH9-204ENST00000544246 MAP3K12Q12852 859 aa11.89□□□□□ -0.51
PCDH9-204ENST00000544246 TMEM132EQ6IEE7 984 aa11.89□□□□□ -0.51
PCDH9-204ENST00000544246 GTPBP4Q9BZE4 634 aaKnown RBP11.89□□□□□ -0.51
PCDH9-204ENST00000544246 MMRN2Q9H8L6 949 aa11.89□□□□□ -0.51
PCDH9-204ENST00000544246 USP25Q9UHP3 1055 aa11.89□□□□□ -0.51
PCDH9-204ENST00000544246 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.89□□□□□ -0.51
PCDH9-204ENST00000544246 BIVM-ERCC5R4GMW8 1640 aa11.89□□□□□ -0.51
PCDH9-204ENST00000544246 ATP2A1O14983 1001 aa11.89□□□□□ -0.51
PCDH9-204ENST00000544246 ZNF213O14771 459 aa11.89□□□□□ -0.51
PCDH9-204ENST00000544246 TBCAO75347 108 aaKnown RBP11.89□□□□□ -0.51
PCDH9-204ENST00000544246 GMNNO75496 209 aa11.89□□□□□ -0.51
PCDH9-204ENST00000544246 GLRX3O76003 335 aaKnown RBP11.89□□□□□ -0.51
PCDH9-204ENST00000544246 GNG11P61952 73 aa11.89□□□□□ -0.51
PCDH9-204ENST00000544246 KIF1BPQ96EK5 621 aa11.89□□□□□ -0.51
PCDH9-204ENST00000544246 SELENOSQ9BQE4 189 aa11.89□□□□□ -0.51
PCDH9-204ENST00000544246 IDEP14735 1019 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 MX1P20591 662 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 CCDC144CPQ8IYA2 1237 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 SRRTQ9BXP5 876 aaKnown RBP11.88□□□□□ -0.51
PCDH9-204ENST00000544246 ANKIB1Q9P2G1 1089 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 EPRSP07814 1512 aaKnown RBP11.88□□□□□ -0.51
PCDH9-204ENST00000544246 STARD3NLO95772 234 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 PAXIP1Q6ZW49 1069 aaPredicted RBP11.88□□□□□ -0.51
PCDH9-204ENST00000544246 GSTA5Q7RTV2 222 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 SMC1BQ8NDV3 1235 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 KIAA1524Q8TCG1 905 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 EXOC1Q9NV70 894 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 WDR70Q9NW82 654 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 RMND1Q9NWS8 449 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 ZHX1Q9UKY1 873 aaPredicted RBP11.88□□□□□ -0.51
PCDH9-204ENST00000544246 ANKRD50Q9ULJ7 1429 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 MAP3K9P80192 1104 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 ATRIPQ8WXE1 791 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 SNX16P57768 344 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 USP37Q86T82 979 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 CWC25Q9NXE8 425 aaPredicted RBP11.88□□□□□ -0.51
PCDH9-204ENST00000544246 SAMM50Q9Y512 469 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 CCDC171Q6TFL3 1326 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 CTAGE15A4D2H0 777 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 CTAGE8P0CG41 777 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 SLC5A1P13866 664 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 MCM5P33992 734 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 CTAGE6Q86UF2 777 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 CTAGE4Q8IX94 777 aa11.88□□□□□ -0.51
PCDH9-204ENST00000544246 IFIT3O14879 490 aaKnown RBP11.87□□□□□ -0.51
PCDH9-204ENST00000544246 CEP120Q8N960 986 aa11.87□□□□□ -0.51
PCDH9-204ENST00000544246 C9orf84Q5VXU9 1444 aa11.87□□□□□ -0.51
PCDH9-204ENST00000544246 ZFYP08048 801 aaPredicted RBP11.87□□□□□ -0.51
PCDH9-204ENST00000544246 KIF5BP33176 963 aa11.87□□□□□ -0.51
PCDH9-204ENST00000544246 KRT222Q8N1A0 295 aa11.87□□□□□ -0.51
PCDH9-204ENST00000544246 CCDC110Q8TBZ0 833 aa11.87□□□□□ -0.51
PCDH9-204ENST00000544246 ZSWIM4Q9H7M6 989 aa11.87□□□□□ -0.51
PCDH9-204ENST00000544246 ADCY5O95622 1261 aa11.87□□□□□ -0.51
PCDH9-204ENST00000544246 KRT13P13646 458 aa11.87□□□□□ -0.51
PCDH9-204ENST00000544246 FEZ2Q9UHY8 353 aaPredicted RBP11.87□□□□□ -0.51
PCDH9-204ENST00000544246 ANKRD30BQ9BXX2 1392 aa11.87□□□□□ -0.51
PCDH9-204ENST00000544246 BIN1O00499 593 aa11.87□□□□□ -0.51
PCDH9-204ENST00000544246 ALDH3A1P30838 453 aa11.87□□□□□ -0.51
PCDH9-204ENST00000544246 CYLC1P35663 651 aaPredicted RBP11.87□□□□□ -0.51
PCDH9-204ENST00000544246 MICALL1Q8N3F8 863 aa11.87□□□□□ -0.51
PCDH9-204ENST00000544246 CCDC82Q8N4S0 544 aa11.87□□□□□ -0.51
PCDH9-204ENST00000544246 PBRM1Q86U86 1689 aa11.87□□□□□ -0.51
PCDH9-204ENST00000544246 PLCD3Q8N3E9 789 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms