RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 ERBB3P21860 1342 aa12.12□□□□□ -0.47
TCF4-209ENST00000544241 POLR3GO15318 223 aaPredicted RBP12.12□□□□□ -0.47
TCF4-209ENST00000544241 RAB11FIP3O75154 756 aa12.12□□□□□ -0.47
TCF4-209ENST00000544241 GIGYF1O75420 1035 aaPredicted RBP12.12□□□□□ -0.47
TCF4-209ENST00000544241 SRLQ86TD4 932 aa12.12□□□□□ -0.47
TCF4-209ENST00000544241 IQUBQ8NA54 791 aa12.12□□□□□ -0.47
TCF4-209ENST00000544241 ANO10Q9NW15 660 aa12.12□□□□□ -0.47
TCF4-209ENST00000544241 CFAP45Q9UL16 551 aa12.12□□□□□ -0.47
TCF4-209ENST00000544241 MROH1Q8NDA8 1641 aa12.11□□□□□ -0.47
TCF4-209ENST00000544241 KIF20BQ96Q89 1820 aa12.11□□□□□ -0.47
TCF4-209ENST00000544241 MMP14P50281 582 aa12.11□□□□□ -0.47
TCF4-209ENST00000544241 ATP8B2P98198 1209 aa12.11□□□□□ -0.47
TCF4-209ENST00000544241 IQCB1Q15051 598 aa12.11□□□□□ -0.47
TCF4-209ENST00000544241 JAKMIP3Q5VZ66 844 aa12.11□□□□□ -0.47
TCF4-209ENST00000544241 TSHZ3Q63HK5 1081 aa12.11□□□□□ -0.47
TCF4-209ENST00000544241 MYCBPQ99417 103 aaPredicted RBP12.11□□□□□ -0.47
TCF4-209ENST00000544241 UBXN6Q9BZV1 441 aa12.11□□□□□ -0.47
TCF4-209ENST00000544241 LSG1Q9H089 658 aaKnown RBP12.11□□□□□ -0.47
TCF4-209ENST00000544241 ORC3Q9UBD5 711 aaPredicted RBP12.11□□□□□ -0.47
TCF4-209ENST00000544241 SLC4A2P04920 1241 aa12.11□□□□□ -0.47
TCF4-209ENST00000544241 IL13P35225 146 aa12.11□□□□□ -0.47
TCF4-209ENST00000544241 SMC1AQ14683 1233 aaKnown RBP12.11□□□□□ -0.47
TCF4-209ENST00000544241 LEO1Q8WVC0 666 aaPredicted RBP12.11□□□□□ -0.47
TCF4-209ENST00000544241 ABCC3O15438 1527 aa12.1□□□□□ -0.47
TCF4-209ENST00000544241 CHL1O00533 1208 aa12.1□□□□□ -0.47
TCF4-209ENST00000544241 PSMA5P28066 241 aa12.1□□□□□ -0.47
TCF4-209ENST00000544241 OAS2P29728 719 aaKnown RBP12.1□□□□□ -0.47
TCF4-209ENST00000544241 HOMER1Q86YM7 354 aa12.1□□□□□ -0.47
TCF4-209ENST00000544241 CEP57L1Q8IYX8 460 aa12.1□□□□□ -0.47
TCF4-209ENST00000544241 PPP1R13BQ96KQ4 1090 aa12.1□□□□□ -0.47
TCF4-209ENST00000544241 ZSWIM6Q9HCJ5 1215 aa12.1□□□□□ -0.47
TCF4-209ENST00000544241 CD163L1Q9NR16 1453 aa12.1□□□□□ -0.47
TCF4-209ENST00000544241 CLGNO14967 610 aa12.09□□□□□ -0.47
TCF4-209ENST00000544241 SFPQP23246 707 aaKnown RBP eCLIP12.09□□□□□ -0.47
TCF4-209ENST00000544241 ETF1P62495 437 aaKnown RBP12.09□□□□□ -0.47
TCF4-209ENST00000544241 KRT24Q2M2I5 525 aa12.09□□□□□ -0.47
TCF4-209ENST00000544241 SLC4A10Q6U841 1118 aa12.09□□□□□ -0.47
TCF4-209ENST00000544241 GPR161Q8N6U8 529 aaKnown RBP12.09□□□□□ -0.47
TCF4-209ENST00000544241 SMARCE1Q969G3 411 aa12.09□□□□□ -0.47
TCF4-209ENST00000544241 NCAPGQ9BPX3 1015 aa12.09□□□□□ -0.47
TCF4-209ENST00000544241 DEF6Q9H4E7 631 aa12.09□□□□□ -0.47
TCF4-209ENST00000544241 ARFGAP3Q9NP61 516 aa12.09□□□□□ -0.47
TCF4-209ENST00000544241 RRP15Q9Y3B9 282 aaKnown RBP12.09□□□□□ -0.47
TCF4-209ENST00000544241 NR1I2O75469 434 aa12.09□□□□□ -0.47
TCF4-209ENST00000544241 ACTN2P35609 894 aa12.09□□□□□ -0.47
TCF4-209ENST00000544241 LRRFIP1Q32MZ4 808 aaKnown RBP12.09□□□□□ -0.47
TCF4-209ENST00000544241 DNAI1Q9UI46 699 aa12.09□□□□□ -0.47
TCF4-209ENST00000544241 USP16Q9Y5T5 823 aa12.09□□□□□ -0.47
TCF4-209ENST00000544241 CLTCQ00610 1675 aaKnown RBP12.09□□□□□ -0.47
TCF4-209ENST00000544241 CAMSAP1Q5T5Y3 1602 aa12.08□□□□□ -0.48
TCF4-209ENST00000544241 GUCY2CP25092 1073 aa12.08□□□□□ -0.48
TCF4-209ENST00000544241 MAGEA9P43362 315 aa12.08□□□□□ -0.48
TCF4-209ENST00000544241 TTC31Q49AM3 519 aaPredicted RBP12.08□□□□□ -0.48
TCF4-209ENST00000544241 CERS3Q8IU89 383 aa12.08□□□□□ -0.48
TCF4-209ENST00000544241 RASEFQ8IZ41 740 aa12.08□□□□□ -0.48
TCF4-209ENST00000544241 JAKMIP1Q96N16 626 aaKnown RBP12.08□□□□□ -0.48
TCF4-209ENST00000544241 ZSCAN16Q9H4T2 348 aaPredicted RBP12.08□□□□□ -0.48
TCF4-209ENST00000544241 KIF13AQ9H1H9 1805 aa12.08□□□□□ -0.48
TCF4-209ENST00000544241 TTC41PQ6P2S7 1318 aa12.08□□□□□ -0.48
TCF4-209ENST00000544241 CDC37L1Q7L3B6 337 aa12.08□□□□□ -0.48
TCF4-209ENST00000544241 UNC5CLQ8IV45 518 aa12.08□□□□□ -0.48
TCF4-209ENST00000544241 YTHDC2Q9H6S0 1430 aaKnown RBP12.07□□□□□ -0.48
TCF4-209ENST00000544241 SOS1Q07889 1333 aaPredicted RBP12.07□□□□□ -0.48
TCF4-209ENST00000544241 TSPOAP1O95153 1857 aa12.07□□□□□ -0.48
TCF4-209ENST00000544241 ZRSR1Q15695 479 aaKnown RBP12.07□□□□□ -0.48
TCF4-209ENST00000544241 E4F1Q66K89 784 aaPredicted RBP12.07□□□□□ -0.48
TCF4-209ENST00000544241 PPM1EQ8WY54 764 aa12.07□□□□□ -0.48
TCF4-209ENST00000544241 JRKLQ9Y4A0 524 aa12.07□□□□□ -0.48
TCF4-209ENST00000544241 PLEKHG2Q9H7P9 1386 aa12.07□□□□□ -0.48
TCF4-209ENST00000544241 SMC2O95347 1197 aa12.07□□□□□ -0.48
TCF4-209ENST00000544241 ARID5BQ14865 1188 aa12.07□□□□□ -0.48
TCF4-209ENST00000544241 ME3Q16798 604 aa12.07□□□□□ -0.48
TCF4-209ENST00000544241 KCNB2Q92953 911 aa12.07□□□□□ -0.48
TCF4-209ENST00000544241 STK31Q9BXU1 1019 aa12.07□□□□□ -0.48
TCF4-209ENST00000544241 MKRN1Q9UHC7 482 aaKnown RBP12.07□□□□□ -0.48
TCF4-209ENST00000544241 GOLGA6L9A6NEM1 432 aa12.06□□□□□ -0.48
TCF4-209ENST00000544241 KINO60870 393 aaKnown RBP12.06□□□□□ -0.48
TCF4-209ENST00000544241 LARGE1O95461 756 aa12.06□□□□□ -0.48
TCF4-209ENST00000544241 TRHP20396 242 aaPredicted RBP12.06□□□□□ -0.48
TCF4-209ENST00000544241 ST5P78524 1137 aa12.06□□□□□ -0.48
TCF4-209ENST00000544241 SAFB2Q14151 953 aaKnown RBP eCLIP12.06□□□□□ -0.48
TCF4-209ENST00000544241 CCDC73Q6ZRK6 1079 aa12.06□□□□□ -0.48
TCF4-209ENST00000544241 FERMT3Q86UX7 667 aa12.06□□□□□ -0.48
TCF4-209ENST00000544241 ADAM21Q9UKJ8 722 aa12.06□□□□□ -0.48
TCF4-209ENST00000544241 NEXMIFQ5QGS0 1516 aa12.06□□□□□ -0.48
TCF4-209ENST00000544241 FAM83GA6ND36 823 aa12.06□□□□□ -0.48
TCF4-209ENST00000544241 ZSCAN12O43309 604 aa12.06□□□□□ -0.48
TCF4-209ENST00000544241 TADA3O75528 432 aa12.06□□□□□ -0.48
TCF4-209ENST00000544241 LMAN1P49257 510 aa12.06□□□□□ -0.48
TCF4-209ENST00000544241 TUBB4BP68371 445 aa12.06□□□□□ -0.48
TCF4-209ENST00000544241 HSP90AB4PQ58FF6 505 aa12.06□□□□□ -0.48
TCF4-209ENST00000544241 CC2D1AQ6P1N0 951 aaPredicted RBP12.06□□□□□ -0.48
TCF4-209ENST00000544241 LARP6Q9BRS8 491 aaKnown RBP12.06□□□□□ -0.48
TCF4-209ENST00000544241 ATG3Q9NT62 314 aa12.06□□□□□ -0.48
TCF4-209ENST00000544241 ATP7BP35670 1465 aa12.05□□□□□ -0.48
TCF4-209ENST00000544241 DLG5Q8TDM6 1919 aa12.05□□□□□ -0.48
TCF4-209ENST00000544241 RPS6KA5O75582 802 aa12.05□□□□□ -0.48
TCF4-209ENST00000544241 EIF3JO75822 258 aaKnown RBP12.05□□□□□ -0.48
TCF4-209ENST00000544241 TBC1D8O95759 1140 aa12.05□□□□□ -0.48
TCF4-209ENST00000544241 ATL3Q6DD88 541 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms