RNA–Protein interactions for RNA: ENST00000544128.5

SP140-214, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 910 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-214ENST00000544128 A0A087WZG4 1122 aa12.02□□□□□ -0.49
SP140-214ENST00000544128 PHF14O94880 888 aa12.02□□□□□ -0.49
SP140-214ENST00000544128 DCAF8Q5TAQ9 597 aa12.02□□□□□ -0.49
SP140-214ENST00000544128 DZIP3Q86Y13 1208 aaKnown RBP12.02□□□□□ -0.49
SP140-214ENST00000544128 TMEM57Q8N5G2 664 aa12.02□□□□□ -0.49
SP140-214ENST00000544128 CRBNQ96SW2 442 aa12.02□□□□□ -0.49
SP140-214ENST00000544128 MTFR1LQ9H019 292 aa12.02□□□□□ -0.49
SP140-214ENST00000544128 COG6Q9Y2V7 657 aa12.02□□□□□ -0.49
SP140-214ENST00000544128 ABCC4O15439 1325 aa12.02□□□□□ -0.49
SP140-214ENST00000544128 COL15A1P39059 1388 aa12.02□□□□□ -0.49
SP140-214ENST00000544128 NUBP1P53384 320 aa12.01□□□□□ -0.49
SP140-214ENST00000544128 ZNF827Q17R98 1081 aa12.01□□□□□ -0.49
SP140-214ENST00000544128 AMIGO3Q86WK7 504 aa12.01□□□□□ -0.49
SP140-214ENST00000544128 ITPRIPQ8IWB1 547 aa12.01□□□□□ -0.49
SP140-214ENST00000544128 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
SP140-214ENST00000544128 MYD88Q99836 296 aa12.01□□□□□ -0.49
SP140-214ENST00000544128 RYDENQ9NUL5 291 aaKnown RBP12.01□□□□□ -0.49
SP140-214ENST00000544128 MAP3K15Q6ZN16 1313 aa12.01□□□□□ -0.49
SP140-214ENST00000544128 TRAPPC3LQ5T215 181 aa12□□□□□ -0.49
SP140-214ENST00000544128 INTS3Q68E01 1043 aaKnown RBP12□□□□□ -0.49
SP140-214ENST00000544128 PELP1Q8IZL8 1130 aaKnown RBP12□□□□□ -0.49
SP140-214ENST00000544128 EXOC6Q8TAG9 804 aa12□□□□□ -0.49
SP140-214ENST00000544128 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
SP140-214ENST00000544128 METTL22Q9BUU2 404 aaPredicted RBP12□□□□□ -0.49
SP140-214ENST00000544128 TFCP2L1Q9NZI6 479 aa12□□□□□ -0.49
SP140-214ENST00000544128 ARFGEF2Q9Y6D5 1785 aa12□□□□□ -0.49
SP140-214ENST00000544128 UBR3Q6ZT12 1888 aa12□□□□□ -0.49
SP140-214ENST00000544128 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.99□□□□□ -0.49
SP140-214ENST00000544128 ERVV-1B6SEH8 477 aa11.99□□□□□ -0.49
SP140-214ENST00000544128 CAMTA2O94983 1202 aa11.99□□□□□ -0.49
SP140-214ENST00000544128 CCT4P50991 539 aaKnown RBP11.99□□□□□ -0.49
SP140-214ENST00000544128 NEXNQ0ZGT2 675 aa11.99□□□□□ -0.49
SP140-214ENST00000544128 MVPQ14764 893 aaKnown RBP11.99□□□□□ -0.49
SP140-214ENST00000544128 HLFQ16534 295 aa11.99□□□□□ -0.49
SP140-214ENST00000544128 BEND3Q5T5X7 828 aa11.99□□□□□ -0.49
SP140-214ENST00000544128 SRCIN1Q9C0H9 1055 aa11.99□□□□□ -0.49
SP140-214ENST00000544128 STK32BQ9NY57 414 aa11.99□□□□□ -0.49
SP140-214ENST00000544128 ATP5J2-PTCD1G3V325 749 aa11.98□□□□□ -0.49
SP140-214ENST00000544128 ZPR1O75312 459 aa11.98□□□□□ -0.49
SP140-214ENST00000544128 SSFA2P28290 1259 aa11.98□□□□□ -0.49
SP140-214ENST00000544128 RFC4P35249 363 aa11.98□□□□□ -0.49
SP140-214ENST00000544128 SLC15A2Q16348 729 aa11.98□□□□□ -0.49
SP140-214ENST00000544128 GIGYF2Q6Y7W6 1299 aaKnown RBP11.98□□□□□ -0.49
SP140-214ENST00000544128 LINS1Q8NG48 757 aa11.98□□□□□ -0.49
SP140-214ENST00000544128 SRP68Q9UHB9 627 aaKnown RBP11.98□□□□□ -0.49
SP140-214ENST00000544128 NARFQ9UHQ1 456 aa11.98□□□□□ -0.49
SP140-214ENST00000544128 PXDNLA1KZ92 1463 aa11.97□□□□□ -0.49
SP140-214ENST00000544128 IGKV5-2P06315 115 aa11.97□□□□□ -0.49
SP140-214ENST00000544128 TCIRG1Q13488 830 aa11.97□□□□□ -0.49
SP140-214ENST00000544128 CWF19L2Q2TBE0 894 aaKnown RBP11.97□□□□□ -0.49
SP140-214ENST00000544128 USPL1Q5W0Q7 1092 aa11.97□□□□□ -0.49
SP140-214ENST00000544128 DDX19BQ9UMR2 479 aa11.97□□□□□ -0.49
SP140-214ENST00000544128 NUP98P52948 1817 aa11.97□□□□□ -0.49
SP140-214ENST00000544128 ATP10DQ9P241 1426 aa11.96□□□□□ -0.49
SP140-214ENST00000544128 TUBGCP6Q96RT7 1819 aa11.96□□□□□ -0.49
SP140-214ENST00000544128 ALDH1L1O75891 902 aa11.96□□□□□ -0.49
SP140-214ENST00000544128 GPTP24298 496 aa11.96□□□□□ -0.49
SP140-214ENST00000544128 HSP90AB3PQ58FF7 597 aa11.96□□□□□ -0.49
SP140-214ENST00000544128 COL23A1Q86Y22 540 aaPredicted RBP11.96□□□□□ -0.49
SP140-214ENST00000544128 FLAD1Q8NFF5 587 aa11.96□□□□□ -0.49
SP140-214ENST00000544128 DAXXQ9UER7 740 aaPredicted RBP11.96□□□□□ -0.49
SP140-214ENST00000544128 ZNF652Q9Y2D9 606 aa11.96□□□□□ -0.49
SP140-214ENST00000544128 AFDNP55196 1824 aaKnown RBP11.95□□□□□ -0.5
SP140-214ENST00000544128 BCORQ6W2J9 1755 aa11.95□□□□□ -0.5
SP140-214ENST00000544128 N4BP2Q86UW6 1770 aaPredicted RBP11.95□□□□□ -0.5
SP140-214ENST00000544128 C4AP0C0L4 1744 aa11.95□□□□□ -0.5
SP140-214ENST00000544128 PNPLA7Q6ZV29 1317 aa11.95□□□□□ -0.5
SP140-214ENST00000544128 USP42Q9H9J4 1324 aaKnown RBP11.95□□□□□ -0.5
SP140-214ENST00000544128 NEURL1BA8MQ27 555 aa11.95□□□□□ -0.5
SP140-214ENST00000544128 ZBTB7BO15156 539 aaPredicted RBP11.95□□□□□ -0.5
SP140-214ENST00000544128 COL13A1Q5TAT6 717 aaPredicted RBP11.95□□□□□ -0.5
SP140-214ENST00000544128 ISCA1Q9BUE6 129 aa11.95□□□□□ -0.5
SP140-214ENST00000544128 BCL2L12Q9HB09 334 aa11.95□□□□□ -0.5
SP140-214ENST00000544128 GCKRQ14397 625 aa11.94□□□□□ -0.5
SP140-214ENST00000544128 CLEC4GQ6UXB4 293 aa11.94□□□□□ -0.5
SP140-214ENST00000544128 BICDL1Q6ZP65 573 aa11.94□□□□□ -0.5
SP140-214ENST00000544128 ZNF34Q8IZ26 560 aa11.94□□□□□ -0.5
SP140-214ENST00000544128 FAM212AQ96EL1 285 aa11.94□□□□□ -0.5
SP140-214ENST00000544128 MEIS3Q99687 375 aa11.94□□□□□ -0.5
SP140-214ENST00000544128 USP44Q9H0E7 712 aa11.94□□□□□ -0.5
SP140-214ENST00000544128 CHMP4BQ9H444 224 aaKnown RBP11.94□□□□□ -0.5
SP140-214ENST00000544128 GPBP1L1Q9HC44 474 aaPredicted RBP11.94□□□□□ -0.5
SP140-214ENST00000544128 CWC25Q9NXE8 425 aaPredicted RBP11.94□□□□□ -0.5
SP140-214ENST00000544128 C9orf78Q9NZ63 289 aaPredicted RBP11.94□□□□□ -0.5
SP140-214ENST00000544128 ANKRD36CQ5JPF3 1778 aa11.94□□□□□ -0.5
SP140-214ENST00000544128 SCN7AQ01118 1682 aa11.94□□□□□ -0.5
SP140-214ENST00000544128 FAM177BA6PVY3 158 aa11.93□□□□□ -0.5
SP140-214ENST00000544128 GNAI3P08754 354 aa11.93□□□□□ -0.5
SP140-214ENST00000544128 TRIM28Q13263 835 aaKnown RBP11.93□□□□□ -0.5
SP140-214ENST00000544128 TBC1D9BQ66K14 1250 aa11.93□□□□□ -0.5
SP140-214ENST00000544128 NLRP10Q86W26 655 aa11.93□□□□□ -0.5
SP140-214ENST00000544128 CCDC191Q8NCU4 936 aa11.93□□□□□ -0.5
SP140-214ENST00000544128 JARID2Q92833 1246 aaPredicted RBP11.93□□□□□ -0.5
SP140-214ENST00000544128 ZBTB40Q9NUA8 1239 aa11.93□□□□□ -0.5
SP140-214ENST00000544128 NIP7Q9Y221 180 aaKnown RBP eCLIP11.93□□□□□ -0.5
SP140-214ENST00000544128 PCNTO95613 3336 aa11.93□□□□□ -0.5
SP140-214ENST00000544128 GRM8O00222 908 aa11.92□□□□□ -0.5
SP140-214ENST00000544128 GYS1P13807 737 aa11.92□□□□□ -0.5
SP140-214ENST00000544128 ERICH6BQ5W0A0 696 aa11.92□□□□□ -0.5
SP140-214ENST00000544128 ZNF526Q8TF50 670 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms