RNA–Protein interactions for RNA: ENST00000543585.1

SCNN1A-220, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-220ENST00000543585 PRPF40BQ6NWY9 871 aaKnown RBP20.45■□□□□ 0.86
SCNN1A-220ENST00000543585 NLRP10Q86W26 655 aa20.45■□□□□ 0.86
SCNN1A-220ENST00000543585 ZNF219Q9P2Y4 722 aaPredicted RBP20.45■□□□□ 0.86
SCNN1A-220ENST00000543585 ZNF521Q96K83 1311 aa20.45■□□□□ 0.86
SCNN1A-220ENST00000543585 TCERG1O14776 1098 aaKnown RBP20.44■□□□□ 0.86
SCNN1A-220ENST00000543585 GTF2E1P29083 439 aaPredicted RBP20.44■□□□□ 0.86
SCNN1A-220ENST00000543585 CRY2Q49AN0 593 aa20.44■□□□□ 0.86
SCNN1A-220ENST00000543585 C9orf131Q5VYM1 1079 aa20.44■□□□□ 0.86
SCNN1A-220ENST00000543585 ANKRD13DQ6ZTN6 518 aa20.44■□□□□ 0.86
SCNN1A-220ENST00000543585 SYNE4Q8N205 404 aa20.44■□□□□ 0.86
SCNN1A-220ENST00000543585 CNKSR1Q969H4 720 aa20.44■□□□□ 0.86
SCNN1A-220ENST00000543585 ZNF428Q96B54 188 aa20.44■□□□□ 0.86
SCNN1A-220ENST00000543585 NPR1P16066 1061 aa20.43■□□□□ 0.86
SCNN1A-220ENST00000543585 TWISTNBQ3B726 338 aaPredicted RBP20.43■□□□□ 0.86
SCNN1A-220ENST00000543585 HSP90AB3PQ58FF7 597 aa20.43■□□□□ 0.86
SCNN1A-220ENST00000543585 PPP1R42Q7Z4L9 355 aa20.43■□□□□ 0.86
SCNN1A-220ENST00000543585 C7orf43Q8WVR3 580 aa20.43■□□□□ 0.86
SCNN1A-220ENST00000543585 ISCA1Q9BUE6 129 aa20.43■□□□□ 0.86
SCNN1A-220ENST00000543585 CCDC30Q5VVM6 783 aa20.42■□□□□ 0.86
SCNN1A-220ENST00000543585 UTP14AQ9BVJ6 771 aaKnown RBP20.42■□□□□ 0.86
SCNN1A-220ENST00000543585 OLFM4Q6UX06 510 aa20.41■□□□□ 0.86
SCNN1A-220ENST00000543585 SLC51AQ86UW1 340 aa20.41■□□□□ 0.86
SCNN1A-220ENST00000543585 ZNF526Q8TF50 670 aaPredicted RBP20.41■□□□□ 0.86
SCNN1A-220ENST00000543585 MYH3P11055 1940 aa20.41■□□□□ 0.86
SCNN1A-220ENST00000543585 ATP5J2-PTCD1G3V325 749 aa20.4■□□□□ 0.86
SCNN1A-220ENST00000543585 CCER2I3L3R5 266 aa20.4■□□□□ 0.86
SCNN1A-220ENST00000543585 EXOSC9Q06265 439 aaKnown RBP20.4■□□□□ 0.86
SCNN1A-220ENST00000543585 SLC10A5Q5PT55 438 aa20.4■□□□□ 0.86
SCNN1A-220ENST00000543585 SNED1Q8TER0 1413 aa20.4■□□□□ 0.86
SCNN1A-220ENST00000543585 RNF181Q9P0P0 153 aa20.4■□□□□ 0.86
SCNN1A-220ENST00000543585 COL4A1P02462 1669 aa20.39■□□□□ 0.86
SCNN1A-220ENST00000543585 G2E3Q7L622 706 aa20.39■□□□□ 0.85
SCNN1A-220ENST00000543585 VAMP4O75379 141 aa20.38■□□□□ 0.85
SCNN1A-220ENST00000543585 HOXA10P31260 410 aaPredicted RBP20.38■□□□□ 0.85
SCNN1A-220ENST00000543585 RNF123Q5XPI4 1314 aa20.37■□□□□ 0.85
SCNN1A-220ENST00000543585 HCLS1P14317 486 aaPredicted RBP20.37■□□□□ 0.85
SCNN1A-220ENST00000543585 GOLGA2Q08379 1002 aa20.37■□□□□ 0.85
SCNN1A-220ENST00000543585 RIC3Q7Z5B4 369 aa20.37■□□□□ 0.85
SCNN1A-220ENST00000543585 TRMT112Q9UI30 125 aaKnown RBP20.37■□□□□ 0.85
SCNN1A-220ENST00000543585 LMNB1P20700 586 aa20.36■□□□□ 0.85
SCNN1A-220ENST00000543585 SH3TC1Q8TE82 1336 aa20.35■□□□□ 0.85
SCNN1A-220ENST00000543585 LTBP3Q9NS15 1303 aa20.35■□□□□ 0.85
SCNN1A-220ENST00000543585 TRIM28Q13263 835 aaKnown RBP20.35■□□□□ 0.85
SCNN1A-220ENST00000543585 FAM89AQ96GI7 184 aa20.35■□□□□ 0.85
SCNN1A-220ENST00000543585 MYD88Q99836 296 aa20.35■□□□□ 0.85
SCNN1A-220ENST00000543585 GPBP1L1Q9HC44 474 aaPredicted RBP20.35■□□□□ 0.85
SCNN1A-220ENST00000543585 LRRC37AA6NMS7 1700 aa20.34■□□□□ 0.85
SCNN1A-220ENST00000543585 ALDH1B1P30837 517 aa20.34■□□□□ 0.85
SCNN1A-220ENST00000543585 RPGRQ92834 1020 aaKnown RBP20.34■□□□□ 0.85
SCNN1A-220ENST00000543585 NLRP3Q96P20 1036 aa20.34■□□□□ 0.85
SCNN1A-220ENST00000543585 STK31Q9BXU1 1019 aa20.34■□□□□ 0.85
SCNN1A-220ENST00000543585 SPEF2Q9C093 1822 aa20.33■□□□□ 0.85
SCNN1A-220ENST00000543585 SLC4A2P04920 1241 aa20.33■□□□□ 0.85
SCNN1A-220ENST00000543585 CCDC93Q567U6 631 aa20.33■□□□□ 0.85
SCNN1A-220ENST00000543585 DIEXFQ68CQ4 756 aaKnown RBP20.33■□□□□ 0.85
SCNN1A-220ENST00000543585 MIER1Q8N108 512 aa20.33■□□□□ 0.85
SCNN1A-220ENST00000543585 CRAMP1Q96RY5 1269 aa20.33■□□□□ 0.85
SCNN1A-220ENST00000543585 METTL22Q9BUU2 404 aaPredicted RBP20.33■□□□□ 0.85
SCNN1A-220ENST00000543585 CHMP4AQ9BY43 222 aa20.33■□□□□ 0.85
SCNN1A-220ENST00000543585 TAOK3Q9H2K8 898 aa20.33■□□□□ 0.85
SCNN1A-220ENST00000543585 MYH16Q9H6N6 1097 aa20.33■□□□□ 0.85
SCNN1A-220ENST00000543585 MAP3K2Q9Y2U5 619 aa20.33■□□□□ 0.85
SCNN1A-220ENST00000543585 ABCC4O15439 1325 aa20.32■□□□□ 0.84
SCNN1A-220ENST00000543585 PI4KAP2A4QPH2 592 aa20.32■□□□□ 0.84
SCNN1A-220ENST00000543585 KIF3CO14782 793 aa20.32■□□□□ 0.84
SCNN1A-220ENST00000543585 RTL5Q5HYW3 569 aaPredicted RBP20.32■□□□□ 0.84
SCNN1A-220ENST00000543585 SOGA3Q5TF21 947 aa20.32■□□□□ 0.84
SCNN1A-220ENST00000543585 KSR2Q6VAB6 950 aa20.32■□□□□ 0.84
SCNN1A-220ENST00000543585 PI4KAP1Q8N8J0 262 aa20.32■□□□□ 0.84
SCNN1A-220ENST00000543585 IGKV5-2P06315 115 aa20.31■□□□□ 0.84
SCNN1A-220ENST00000543585 RBM17Q96I25 401 aaKnown RBP20.31■□□□□ 0.84
SCNN1A-220ENST00000543585 NMRK2Q9NPI5 230 aa20.31■□□□□ 0.84
SCNN1A-220ENST00000543585 COL4A5P29400 1685 aa20.31■□□□□ 0.84
SCNN1A-220ENST00000543585 DDX58O95786 925 aaKnown RBP20.3■□□□□ 0.84
SCNN1A-220ENST00000543585 FLIIQ13045 1269 aa20.3■□□□□ 0.84
SCNN1A-220ENST00000543585 JARID2Q92833 1246 aaPredicted RBP20.3■□□□□ 0.84
SCNN1A-220ENST00000543585 WDR90Q96KV7 1748 aa20.3■□□□□ 0.84
SCNN1A-220ENST00000543585 FKBP4Q02790 459 aaKnown RBP eCLIP20.29■□□□□ 0.84
SCNN1A-220ENST00000543585 CCDC191Q8NCU4 936 aa20.29■□□□□ 0.84
SCNN1A-220ENST00000543585 ZC3H4Q9UPT8 1303 aaKnown RBP20.28■□□□□ 0.84
SCNN1A-220ENST00000543585 LTBP1Q14766 1721 aa20.28■□□□□ 0.84
SCNN1A-220ENST00000543585 PPEF1O14829 653 aaPredicted RBP20.28■□□□□ 0.84
SCNN1A-220ENST00000543585 C1QTNF8P60827 252 aa20.28■□□□□ 0.84
SCNN1A-220ENST00000543585 SLFN5Q08AF3 891 aa20.28■□□□□ 0.84
SCNN1A-220ENST00000543585 ZBTB38Q8NAP3 1195 aaPredicted RBP20.28■□□□□ 0.84
SCNN1A-220ENST00000543585 CDCA7LQ96GN5 454 aa20.28■□□□□ 0.84
SCNN1A-220ENST00000543585 ZNF277Q9NRM2 450 aaPredicted RBP20.28■□□□□ 0.84
SCNN1A-220ENST00000543585 IRS4O14654 1257 aaPredicted RBP20.27■□□□□ 0.84
SCNN1A-220ENST00000543585 RTKN2Q8IZC4 609 aa20.27■□□□□ 0.84
SCNN1A-220ENST00000543585 CWC25Q9NXE8 425 aaPredicted RBP20.27■□□□□ 0.84
SCNN1A-220ENST00000543585 DUOX1Q9NRD9 1551 aa20.26■□□□□ 0.83
SCNN1A-220ENST00000543585 PCCAP05165 728 aaPredicted RBP20.26■□□□□ 0.83
SCNN1A-220ENST00000543585 SF3B3Q15393 1217 aaKnown RBP20.26■□□□□ 0.83
SCNN1A-220ENST00000543585 CWF19L2Q2TBE0 894 aaKnown RBP20.26■□□□□ 0.83
SCNN1A-220ENST00000543585 NEURL1BA8MQ27 555 aa20.25■□□□□ 0.83
SCNN1A-220ENST00000543585 E9PSI1 815 aa20.25■□□□□ 0.83
SCNN1A-220ENST00000543585 FKBP5Q13451 457 aaPredicted RBP20.25■□□□□ 0.83
SCNN1A-220ENST00000543585 GLTPD2A6NH11 291 aa20.24■□□□□ 0.83
SCNN1A-220ENST00000543585 GRAPQ13588 217 aa20.24■□□□□ 0.83
SCNN1A-220ENST00000543585 TRMT2AQ8IZ69 625 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms