RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 H0YIN7 160 aa7.99□□□□□ -1.13
LTBR-212ENST00000543542 HSP90B1P14625 803 aaKnown RBP7.99□□□□□ -1.13
LTBR-212ENST00000543542 PDE6BP35913 854 aa7.99□□□□□ -1.13
LTBR-212ENST00000543542 CWF19L2Q2TBE0 894 aaKnown RBP7.99□□□□□ -1.13
LTBR-212ENST00000543542 ZKSCAN2Q63HK3 967 aa7.99□□□□□ -1.13
LTBR-212ENST00000543542 FTSJ3Q8IY81 847 aaKnown RBP7.99□□□□□ -1.13
LTBR-212ENST00000543542 CCDC191Q8NCU4 936 aa7.99□□□□□ -1.13
LTBR-212ENST00000543542 LINS1Q8NG48 757 aa7.99□□□□□ -1.13
LTBR-212ENST00000543542 CLUAP1Q96AJ1 413 aa7.99□□□□□ -1.13
LTBR-212ENST00000543542 FAM89AQ96GI7 184 aa7.99□□□□□ -1.13
LTBR-212ENST00000543542 ISCA1Q9BUE6 129 aa7.99□□□□□ -1.13
LTBR-212ENST00000543542 C9orf78Q9NZ63 289 aaPredicted RBP7.99□□□□□ -1.13
LTBR-212ENST00000543542 WWC3Q9ULE0 1092 aa7.99□□□□□ -1.13
LTBR-212ENST00000543542 CD2APQ9Y5K6 639 aa7.99□□□□□ -1.13
LTBR-212ENST00000543542 SH3TC1Q8TE82 1336 aa7.99□□□□□ -1.13
LTBR-212ENST00000543542 NRXN2Q9P2S2 1712 aa7.98□□□□□ -1.13
LTBR-212ENST00000543542 C10orf71Q711Q0 1435 aa7.98□□□□□ -1.13
LTBR-212ENST00000543542 N4BP2Q86UW6 1770 aaPredicted RBP7.98□□□□□ -1.13
LTBR-212ENST00000543542 NEURL1BA8MQ27 555 aa7.98□□□□□ -1.13
LTBR-212ENST00000543542 NTSR2O95665 410 aa7.98□□□□□ -1.13
LTBR-212ENST00000543542 IGKV5-2P06315 115 aa7.98□□□□□ -1.13
LTBR-212ENST00000543542 ATF7IPQ6VMQ6 1270 aa7.98□□□□□ -1.13
LTBR-212ENST00000543542 C2CD5Q86YS7 1000 aa7.98□□□□□ -1.13
LTBR-212ENST00000543542 JARID2Q92833 1246 aaPredicted RBP7.98□□□□□ -1.13
LTBR-212ENST00000543542 RPGRQ92834 1020 aaKnown RBP7.98□□□□□ -1.13
LTBR-212ENST00000543542 ZNF622Q969S3 477 aaKnown RBP eCLIP7.98□□□□□ -1.13
LTBR-212ENST00000543542 NLRP3Q96P20 1036 aa7.98□□□□□ -1.13
LTBR-212ENST00000543542 SYT17Q9BSW7 474 aa7.98□□□□□ -1.13
LTBR-212ENST00000543542 BRIP1Q9BX63 1249 aa7.98□□□□□ -1.13
LTBR-212ENST00000543542 RNF123Q5XPI4 1314 aa7.98□□□□□ -1.13
LTBR-212ENST00000543542 IBTKQ9P2D0 1353 aaPredicted RBP7.97□□□□□ -1.13
LTBR-212ENST00000543542 KIF13BQ9NQT8 1826 aa7.97□□□□□ -1.13
LTBR-212ENST00000543542 A0A0G2JLW4 131 aa7.97□□□□□ -1.13
LTBR-212ENST00000543542 IRS4O14654 1257 aaPredicted RBP7.97□□□□□ -1.13
LTBR-212ENST00000543542 ALDH1L1O75891 902 aa7.97□□□□□ -1.13
LTBR-212ENST00000543542 PCCAP05165 728 aaPredicted RBP7.97□□□□□ -1.13
LTBR-212ENST00000543542 MS4A1P11836 297 aa7.97□□□□□ -1.13
LTBR-212ENST00000543542 HCLS1P14317 486 aaPredicted RBP7.97□□□□□ -1.13
LTBR-212ENST00000543542 CHRNA5P30532 468 aa7.97□□□□□ -1.13
LTBR-212ENST00000543542 CCT4P50991 539 aaKnown RBP7.97□□□□□ -1.13
LTBR-212ENST00000543542 BRPF1P55201 1214 aaPredicted RBP7.97□□□□□ -1.13
LTBR-212ENST00000543542 TGFB2P61812 414 aa7.97□□□□□ -1.13
LTBR-212ENST00000543542 TRIM28Q13263 835 aaKnown RBP7.97□□□□□ -1.13
LTBR-212ENST00000543542 GCKRQ14397 625 aa7.97□□□□□ -1.13
LTBR-212ENST00000543542 BEND3Q5T5X7 828 aa7.97□□□□□ -1.13
LTBR-212ENST00000543542 UBE3BQ7Z3V4 1068 aa7.97□□□□□ -1.13
LTBR-212ENST00000543542 ZBTB38Q8NAP3 1195 aaPredicted RBP7.97□□□□□ -1.13
LTBR-212ENST00000543542 NLGN2Q8NFZ4 835 aa7.97□□□□□ -1.13
LTBR-212ENST00000543542 ARHGAP45Q92619 1136 aa7.97□□□□□ -1.13
LTBR-212ENST00000543542 PDZRN3Q9UPQ7 1066 aa7.97□□□□□ -1.13
LTBR-212ENST00000543542 PXDNLA1KZ92 1463 aa7.97□□□□□ -1.13
LTBR-212ENST00000543542 ABCC12Q96J65 1359 aa7.97□□□□□ -1.13
LTBR-212ENST00000543542 CACNA1SQ13698 1873 aa7.96□□□□□ -1.13
LTBR-212ENST00000543542 ANKRD31Q8N7Z5 1873 aa7.96□□□□□ -1.13
LTBR-212ENST00000543542 PLIN1O60240 522 aa7.96□□□□□ -1.14
LTBR-212ENST00000543542 TRIM27P14373 513 aa7.96□□□□□ -1.14
LTBR-212ENST00000543542 DPEP1P16444 411 aa7.96□□□□□ -1.14
LTBR-212ENST00000543542 GPR162Q16538 588 aa7.96□□□□□ -1.14
LTBR-212ENST00000543542 DZIP1LQ8IYY4 767 aaKnown RBP7.96□□□□□ -1.14
LTBR-212ENST00000543542 SYNE4Q8N205 404 aa7.96□□□□□ -1.14
LTBR-212ENST00000543542 CHMP3Q9Y3E7 222 aa7.96□□□□□ -1.14
LTBR-212ENST00000543542 DDX60Q8IY21 1712 aaKnown RBP7.95□□□□□ -1.14
LTBR-212ENST00000543542 LAMB2P55268 1798 aa7.95□□□□□ -1.14
LTBR-212ENST00000543542 GRM8O00222 908 aa7.95□□□□□ -1.14
LTBR-212ENST00000543542 PDE8AO60658 829 aa7.95□□□□□ -1.14
LTBR-212ENST00000543542 DDX46Q7L014 1031 aaKnown RBP7.95□□□□□ -1.14
LTBR-212ENST00000543542 ITPRIPQ8IWB1 547 aa7.95□□□□□ -1.14
LTBR-212ENST00000543542 MASTLQ96GX5 879 aa7.95□□□□□ -1.14
LTBR-212ENST00000543542 RBM17Q96I25 401 aaKnown RBP7.95□□□□□ -1.14
LTBR-212ENST00000543542 CCDC85AQ96PX6 553 aaPredicted RBP7.95□□□□□ -1.14
LTBR-212ENST00000543542 TMX4Q9H1E5 349 aaPredicted RBP7.95□□□□□ -1.14
LTBR-212ENST00000543542 PIM2Q9P1W9 311 aa7.95□□□□□ -1.14
LTBR-212ENST00000543542 ZNF219Q9P2Y4 722 aaPredicted RBP7.95□□□□□ -1.14
LTBR-212ENST00000543542 HDAC5Q9UQL6 1122 aa7.95□□□□□ -1.14
LTBR-212ENST00000543542 TNNQ9UQP3 1299 aa7.95□□□□□ -1.14
LTBR-212ENST00000543542 BCS1LQ9Y276 419 aa7.95□□□□□ -1.14
LTBR-212ENST00000543542 TNRC6CQ9HCJ0 1690 aaKnown RBP7.95□□□□□ -1.14
LTBR-212ENST00000543542 MYH3P11055 1940 aa7.94□□□□□ -1.14
LTBR-212ENST00000543542 H7C1W4 665 aa7.94□□□□□ -1.14
LTBR-212ENST00000543542 UBTFL1P0CB47 393 aaPredicted RBP7.94□□□□□ -1.14
LTBR-212ENST00000543542 NPR1P16066 1061 aa7.94□□□□□ -1.14
LTBR-212ENST00000543542 ALDH1B1P30837 517 aa7.94□□□□□ -1.14
LTBR-212ENST00000543542 CCDC152Q4G0S7 254 aa7.94□□□□□ -1.14
LTBR-212ENST00000543542 DALRD3Q5D0E6 543 aaKnown RBP7.94□□□□□ -1.14
LTBR-212ENST00000543542 SLC10A5Q5PT55 438 aa7.94□□□□□ -1.14
LTBR-212ENST00000543542 TMEM57Q8N5G2 664 aa7.94□□□□□ -1.14
LTBR-212ENST00000543542 TTLL6Q8N841 843 aa7.94□□□□□ -1.14
LTBR-212ENST00000543542 CNKSR1Q969H4 720 aa7.94□□□□□ -1.14
LTBR-212ENST00000543542 ABCC4O15439 1325 aa7.94□□□□□ -1.14
LTBR-212ENST00000543542 CDHR2Q9BYE9 1310 aa7.94□□□□□ -1.14
LTBR-212ENST00000543542 COL11A2P13942 1736 aaPredicted RBP7.94□□□□□ -1.14
LTBR-212ENST00000543542 DLEC1Q9Y238 1755 aa7.94□□□□□ -1.14
LTBR-212ENST00000543542 RIC1Q4ADV7 1423 aa7.94□□□□□ -1.14
LTBR-212ENST00000543542 KIAA1551Q9HCM1 1747 aa7.93□□□□□ -1.14
LTBR-212ENST00000543542 GNAI3P08754 354 aa7.93□□□□□ -1.14
LTBR-212ENST00000543542 SRGNP10124 158 aa7.93□□□□□ -1.14
LTBR-212ENST00000543542 TAF7LQ5H9L4 462 aa7.93□□□□□ -1.14
LTBR-212ENST00000543542 INTS3Q68E01 1043 aaKnown RBP7.93□□□□□ -1.14
LTBR-212ENST00000543542 STYK1Q6J9G0 422 aa7.93□□□□□ -1.14
LTBR-212ENST00000543542 PANK1Q8TE04 598 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms