RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 DDX58O95786 925 aaKnown RBP12.69□□□□□ -0.38
VEGFB-204ENST00000543462 SBF1O95248 1867 aa12.69□□□□□ -0.38
VEGFB-204ENST00000543462 SPEF2Q9C093 1822 aa12.69□□□□□ -0.38
VEGFB-204ENST00000543462 PTPRCP08575 1304 aa12.68□□□□□ -0.38
VEGFB-204ENST00000543462 TGFB2P61812 414 aa12.68□□□□□ -0.38
VEGFB-204ENST00000543462 FKBP5Q13451 457 aaPredicted RBP12.68□□□□□ -0.38
VEGFB-204ENST00000543462 CRY2Q49AN0 593 aa12.68□□□□□ -0.38
VEGFB-204ENST00000543462 NBPF5PQ86XG9 351 aaPredicted RBP12.68□□□□□ -0.38
VEGFB-204ENST00000543462 DNAAF4Q8WXU2 420 aa12.68□□□□□ -0.38
VEGFB-204ENST00000543462 BRIP1Q9BX63 1249 aa12.68□□□□□ -0.38
VEGFB-204ENST00000543462 BCL2L13Q9BXK5 485 aa12.68□□□□□ -0.38
VEGFB-204ENST00000543462 NYXQ9GZU5 481 aa12.68□□□□□ -0.38
VEGFB-204ENST00000543462 SNED1Q8TER0 1413 aa12.68□□□□□ -0.38
VEGFB-204ENST00000543462 ATP5J2-PTCD1G3V325 749 aa12.67□□□□□ -0.38
VEGFB-204ENST00000543462 SLC10A5Q5PT55 438 aa12.67□□□□□ -0.38
VEGFB-204ENST00000543462 RIC3Q7Z5B4 369 aa12.67□□□□□ -0.38
VEGFB-204ENST00000543462 CCDC191Q8NCU4 936 aa12.67□□□□□ -0.38
VEGFB-204ENST00000543462 MYD88Q99836 296 aa12.67□□□□□ -0.38
VEGFB-204ENST00000543462 SMC4Q9NTJ3 1288 aa12.67□□□□□ -0.38
VEGFB-204ENST00000543462 NEURL1BA8MQ27 555 aa12.66□□□□□ -0.38
VEGFB-204ENST00000543462 F6X3S4 739 aa12.66□□□□□ -0.38
VEGFB-204ENST00000543462 DPEP1P16444 411 aa12.66□□□□□ -0.38
VEGFB-204ENST00000543462 CASP7P55210 303 aa12.66□□□□□ -0.38
VEGFB-204ENST00000543462 ERFEQ4G0M1 354 aa12.66□□□□□ -0.38
VEGFB-204ENST00000543462 BEND3Q5T5X7 828 aa12.66□□□□□ -0.38
VEGFB-204ENST00000543462 TPTE2Q6XPS3 522 aa12.66□□□□□ -0.38
VEGFB-204ENST00000543462 C3orf67Q6ZVT6 689 aa12.66□□□□□ -0.38
VEGFB-204ENST00000543462 PPP1R42Q7Z4L9 355 aa12.66□□□□□ -0.38
VEGFB-204ENST00000543462 NUTM1Q86Y26 1132 aa12.66□□□□□ -0.38
VEGFB-204ENST00000543462 SYNE4Q8N205 404 aa12.66□□□□□ -0.38
VEGFB-204ENST00000543462 CCDC24Q8N4L8 307 aa12.66□□□□□ -0.38
VEGFB-204ENST00000543462 LINS1Q8NG48 757 aa12.66□□□□□ -0.38
VEGFB-204ENST00000543462 UTP14AQ9BVJ6 771 aaKnown RBP12.66□□□□□ -0.38
VEGFB-204ENST00000543462 DICER1Q9UPY3 1922 aaKnown RBP12.66□□□□□ -0.38
VEGFB-204ENST00000543462 CCDC88AQ3V6T2 1871 aa12.65□□□□□ -0.38
VEGFB-204ENST00000543462 ABCC4O15439 1325 aa12.65□□□□□ -0.38
VEGFB-204ENST00000543462 CDHR2Q9BYE9 1310 aa12.65□□□□□ -0.38
VEGFB-204ENST00000543462 SRGNP10124 158 aa12.65□□□□□ -0.38
VEGFB-204ENST00000543462 CHRNA5P30532 468 aa12.65□□□□□ -0.38
VEGFB-204ENST00000543462 ST5P78524 1137 aa12.65□□□□□ -0.38
VEGFB-204ENST00000543462 CWF19L2Q2TBE0 894 aaKnown RBP12.65□□□□□ -0.38
VEGFB-204ENST00000543462 PDZRN3Q9UPQ7 1066 aa12.65□□□□□ -0.38
VEGFB-204ENST00000543462 UTRNP46939 3433 aa12.65□□□□□ -0.38
VEGFB-204ENST00000543462 SH3TC1Q8TE82 1336 aa12.64□□□□□ -0.39
VEGFB-204ENST00000543462 KIF16BQ96L93 1317 aa12.64□□□□□ -0.39
VEGFB-204ENST00000543462 BCAR3O75815 825 aa12.64□□□□□ -0.39
VEGFB-204ENST00000543462 PCCAP05165 728 aaPredicted RBP12.64□□□□□ -0.39
VEGFB-204ENST00000543462 ZBTB38Q8NAP3 1195 aaPredicted RBP12.64□□□□□ -0.39
VEGFB-204ENST00000543462 ARHGAP45Q92619 1136 aa12.64□□□□□ -0.39
VEGFB-204ENST00000543462 CWC25Q9NXE8 425 aaPredicted RBP12.64□□□□□ -0.39
VEGFB-204ENST00000543462 UTYO14607 1347 aa12.63□□□□□ -0.39
VEGFB-204ENST00000543462 A0A0G2JLW4 131 aa12.63□□□□□ -0.39
VEGFB-204ENST00000543462 FAM177BA6PVY3 158 aa12.63□□□□□ -0.39
VEGFB-204ENST00000543462 H7C1W4 665 aa12.63□□□□□ -0.39
VEGFB-204ENST00000543462 YBX3P16989 372 aaKnown RBP eCLIP12.63□□□□□ -0.396e-9■■□□□ 13.5
VEGFB-204ENST00000543462 HOXA10P31260 410 aaPredicted RBP12.63□□□□□ -0.39
VEGFB-204ENST00000543462 PDE6BP35913 854 aa12.63□□□□□ -0.39
VEGFB-204ENST00000543462 GCKRQ14397 625 aa12.63□□□□□ -0.39
VEGFB-204ENST00000543462 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
VEGFB-204ENST00000543462 TRMT112Q9UI30 125 aaKnown RBP12.63□□□□□ -0.39
VEGFB-204ENST00000543462 DUOX1Q9NRD9 1551 aa12.63□□□□□ -0.39
VEGFB-204ENST00000543462 TIAM2Q8IVF5 1701 aa12.62□□□□□ -0.39
VEGFB-204ENST00000543462 ALDH1L1O75891 902 aa12.62□□□□□ -0.39
VEGFB-204ENST00000543462 TRIM27P14373 513 aa12.62□□□□□ -0.39
VEGFB-204ENST00000543462 NEXNQ0ZGT2 675 aa12.62□□□□□ -0.39
VEGFB-204ENST00000543462 STYK1Q6J9G0 422 aa12.62□□□□□ -0.39
VEGFB-204ENST00000543462 C2CD5Q86YS7 1000 aa12.62□□□□□ -0.39
VEGFB-204ENST00000543462 FAM89AQ96GI7 184 aa12.62□□□□□ -0.39
VEGFB-204ENST00000543462 NOB1Q9ULX3 412 aaKnown RBP12.62□□□□□ -0.39
VEGFB-204ENST00000543462 RTL9Q8NET4 1388 aa12.61□□□□□ -0.39
VEGFB-204ENST00000543462 PLA2G12BQ9BX93 195 aa12.61□□□□□ -0.39
VEGFB-204ENST00000543462 TNNQ9UQP3 1299 aa12.61□□□□□ -0.39
VEGFB-204ENST00000543462 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
VEGFB-204ENST00000543462 NPR1P16066 1061 aa12.6□□□□□ -0.39
VEGFB-204ENST00000543462 SF3B3Q15393 1217 aaKnown RBP12.6□□□□□ -0.39
VEGFB-204ENST00000543462 ATF7IPQ6VMQ6 1270 aa12.6□□□□□ -0.39
VEGFB-204ENST00000543462 C7orf43Q8WVR3 580 aa12.6□□□□□ -0.39
VEGFB-204ENST00000543462 MASTLQ96GX5 879 aa12.6□□□□□ -0.39
VEGFB-204ENST00000543462 API5Q9BZZ5 524 aaKnown RBP12.6□□□□□ -0.39
VEGFB-204ENST00000543462 H0YIN7 160 aa12.59□□□□□ -0.39
VEGFB-204ENST00000543462 IRS4O14654 1257 aaPredicted RBP12.59□□□□□ -0.39
VEGFB-204ENST00000543462 INTS3Q68E01 1043 aaKnown RBP12.59□□□□□ -0.39
VEGFB-204ENST00000543462 UBE3BQ7Z3V4 1068 aa12.59□□□□□ -0.39
VEGFB-204ENST00000543462 KAZALD1Q96I82 304 aa12.59□□□□□ -0.39
VEGFB-204ENST00000543462 SRCIN1Q9C0H9 1055 aa12.59□□□□□ -0.39
VEGFB-204ENST00000543462 PIM2Q9P1W9 311 aa12.59□□□□□ -0.39
VEGFB-204ENST00000543462 ZNF646O15015 1829 aaPredicted RBP12.59□□□□□ -0.39
VEGFB-204ENST00000543462 GRM8O00222 908 aa12.58□□□□□ -0.4
VEGFB-204ENST00000543462 PRPF40BQ6NWY9 871 aaKnown RBP12.58□□□□□ -0.4
VEGFB-204ENST00000543462 YTHDC1Q96MU7 727 aaKnown RBP12.58□□□□□ -0.4
VEGFB-204ENST00000543462 CRAMP1Q96RY5 1269 aa12.58□□□□□ -0.4
VEGFB-204ENST00000543462 RCAN3Q9UKA8 241 aa12.58□□□□□ -0.4
VEGFB-204ENST00000543462 NPHP1O15259 732 aa12.57□□□□□ -0.4
VEGFB-204ENST00000543462 PDE8AO60658 829 aa12.57□□□□□ -0.4
VEGFB-204ENST00000543462 GTF2E1P29083 439 aaPredicted RBP12.57□□□□□ -0.4
VEGFB-204ENST00000543462 CTSWP56202 376 aa12.57□□□□□ -0.4
VEGFB-204ENST00000543462 DALRD3Q5D0E6 543 aaKnown RBP12.57□□□□□ -0.4
VEGFB-204ENST00000543462 SLC4A10Q6U841 1118 aa12.57□□□□□ -0.4
VEGFB-204ENST00000543462 SLC51AQ86UW1 340 aa12.57□□□□□ -0.4
VEGFB-204ENST00000543462 TTLL6Q8N841 843 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms