RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 GAS2L2Q8NHY3 880 aa8.35□□□□□ -1.07
MDM2-228ENST00000542502 FAM229AH3BQW9 127 aa8.34□□□□□ -1.07
MDM2-228ENST00000542502 RASA1P20936 1047 aa8.34□□□□□ -1.07
MDM2-228ENST00000542502 BTLAQ7Z6A9 289 aa8.34□□□□□ -1.07
MDM2-228ENST00000542502 BHMTQ93088 406 aa8.34□□□□□ -1.07
MDM2-228ENST00000542502 NACC1Q96RE7 527 aa8.34□□□□□ -1.07
MDM2-228ENST00000542502 SEC13P55735 322 aa8.33□□□□□ -1.08
MDM2-228ENST00000542502 RSPO4Q2I0M5 234 aaPredicted RBP8.33□□□□□ -1.08
MDM2-228ENST00000542502 SCG3Q8WXD2 468 aaKnown RBP8.33□□□□□ -1.08
MDM2-228ENST00000542502 GLMNQ92990 594 aa8.33□□□□□ -1.08
MDM2-228ENST00000542502 EFCC1Q9HA90 598 aa8.33□□□□□ -1.08
MDM2-228ENST00000542502 TFIP11Q9UBB9 837 aaKnown RBP8.33□□□□□ -1.08
MDM2-228ENST00000542502 MAFBQ9Y5Q3 323 aaPredicted RBP8.33□□□□□ -1.08
MDM2-228ENST00000542502 LILRB5O75023 590 aa8.32□□□□□ -1.08
MDM2-228ENST00000542502 NKAPLQ5M9Q1 402 aa8.32□□□□□ -1.08
MDM2-228ENST00000542502 FNBP4Q8N3X1 1017 aaPredicted RBP8.32□□□□□ -1.08
MDM2-228ENST00000542502 TPSG1Q9NRR2 321 aa8.32□□□□□ -1.08
MDM2-228ENST00000542502 GRIK4Q16099 956 aa8.31□□□□□ -1.08
MDM2-228ENST00000542502 IER5Q5VY09 327 aa8.31□□□□□ -1.08
MDM2-228ENST00000542502 CHMP7Q8WUX9 453 aaPredicted RBP8.31□□□□□ -1.08
MDM2-228ENST00000542502 NGLY1Q96IV0 654 aa8.31□□□□□ -1.08
MDM2-228ENST00000542502 RTN1Q16799 776 aa8.3□□□□□ -1.08
MDM2-228ENST00000542502 TRAPPC3LQ5T215 181 aa8.3□□□□□ -1.08
MDM2-228ENST00000542502 PROSER2Q86WR7 435 aaPredicted RBP8.3□□□□□ -1.08
MDM2-228ENST00000542502 CLUAP1Q96AJ1 413 aa8.3□□□□□ -1.08
MDM2-228ENST00000542502 UBE2OQ9C0C9 1292 aaKnown RBP8.3□□□□□ -1.08
MDM2-228ENST00000542502 SLC6A14Q9UN76 642 aa8.3□□□□□ -1.08
MDM2-228ENST00000542502 TBC1D8BQ0IIM8 1120 aa8.29□□□□□ -1.08
MDM2-228ENST00000542502 ZMYM1Q5SVZ6 1142 aa8.29□□□□□ -1.08
MDM2-228ENST00000542502 LARP1Q6PKG0 1096 aaKnown RBP8.29□□□□□ -1.08
MDM2-228ENST00000542502 IGFLR1Q9H665 355 aa8.29□□□□□ -1.08
MDM2-228ENST00000542502 TGFBR3LH3BV60 316 aa8.28□□□□□ -1.08
MDM2-228ENST00000542502 HINFPQ9BQA5 517 aa8.28□□□□□ -1.08
MDM2-228ENST00000542502 GSX2Q9BZM3 304 aa8.28□□□□□ -1.08
MDM2-228ENST00000542502 JPH1Q9HDC5 661 aaPredicted RBP8.28□□□□□ -1.08
MDM2-228ENST00000542502 A0A0A0MRY4 1105 aa8.27□□□□□ -1.09
MDM2-228ENST00000542502 C9orf172C9J069 976 aa8.27□□□□□ -1.09
MDM2-228ENST00000542502 ELNP15502 786 aa8.27□□□□□ -1.09
MDM2-228ENST00000542502 PTK7Q13308 1070 aa8.27□□□□□ -1.09
MDM2-228ENST00000542502 CRTC2Q53ET0 693 aaPredicted RBP8.27□□□□□ -1.09
MDM2-228ENST00000542502 PNMA5Q96PV4 448 aa8.27□□□□□ -1.09
MDM2-228ENST00000542502 DNAJB12Q9NXW2 375 aaKnown RBP8.27□□□□□ -1.09
MDM2-228ENST00000542502 DMGDHQ9UI17 866 aaKnown RBP8.27□□□□□ -1.09
MDM2-228ENST00000542502 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.27□□□□□ -1.09
MDM2-228ENST00000542502 DYRK3O43781 588 aa8.26□□□□□ -1.09
MDM2-228ENST00000542502 IGFBP4P22692 258 aa8.26□□□□□ -1.09
MDM2-228ENST00000542502 DPYDQ12882 1025 aa8.26□□□□□ -1.09
MDM2-228ENST00000542502 CCINQ13939 588 aa8.26□□□□□ -1.09
MDM2-228ENST00000542502 KANK4Q5T7N3 995 aaPredicted RBP8.26□□□□□ -1.09
MDM2-228ENST00000542502 NUDT8Q8WV74 236 aa8.26□□□□□ -1.09
MDM2-228ENST00000542502 PPP1R12CQ9BZL4 782 aa8.26□□□□□ -1.09
MDM2-228ENST00000542502 BCS1LQ9Y276 419 aa8.26□□□□□ -1.09
MDM2-228ENST00000542502 SELPP16109 830 aa8.25□□□□□ -1.09
MDM2-228ENST00000542502 RAC1P63000 192 aa8.25□□□□□ -1.09
MDM2-228ENST00000542502 ADGRE1Q14246 886 aa8.25□□□□□ -1.09
MDM2-228ENST00000542502 PSAPL1Q6NUJ1 521 aa8.25□□□□□ -1.09
MDM2-228ENST00000542502 FAM196BA6NMK8 535 aa8.24□□□□□ -1.09
MDM2-228ENST00000542502 EPB42P16452 691 aa8.24□□□□□ -1.09
MDM2-228ENST00000542502 NFKB1P19838 968 aa8.24□□□□□ -1.09
MDM2-228ENST00000542502 AFF1P51825 1210 aaKnown RBP8.24□□□□□ -1.09
MDM2-228ENST00000542502 MBTPS1Q14703 1052 aa8.24□□□□□ -1.09
MDM2-228ENST00000542502 ANKMY2Q8IV38 441 aa8.24□□□□□ -1.09
MDM2-228ENST00000542502 LENG1Q96BZ8 264 aaPredicted RBP8.24□□□□□ -1.09
MDM2-228ENST00000542502 CALR3Q96L12 384 aaKnown RBP8.24□□□□□ -1.09
MDM2-228ENST00000542502 NAGPAQ9UK23 515 aa8.24□□□□□ -1.09
MDM2-228ENST00000542502 USP17L15C9J2P7 530 aa8.23□□□□□ -1.09
MDM2-228ENST00000542502 USP17L10C9JJH3 530 aa8.23□□□□□ -1.09
MDM2-228ENST00000542502 USP17L13C9JLJ4 530 aa8.23□□□□□ -1.09
MDM2-228ENST00000542502 USP17L12C9JPN9 530 aa8.23□□□□□ -1.09
MDM2-228ENST00000542502 USP17L11C9JVI0 530 aa8.23□□□□□ -1.09
MDM2-228ENST00000542502 USP17L21D6R901 530 aa8.23□□□□□ -1.09
MDM2-228ENST00000542502 USP17L18D6R9N7 530 aa8.23□□□□□ -1.09
MDM2-228ENST00000542502 USP17L22D6RA61 530 aa8.23□□□□□ -1.09
MDM2-228ENST00000542502 USP17L17D6RBQ6 530 aa8.23□□□□□ -1.09
MDM2-228ENST00000542502 USP17L19D6RCP7 530 aa8.23□□□□□ -1.09
MDM2-228ENST00000542502 USP17L20D6RJB6 530 aa8.23□□□□□ -1.09
MDM2-228ENST00000542502 LGR5O75473 907 aa8.23□□□□□ -1.09
MDM2-228ENST00000542502 NRG1Q02297 640 aaPredicted RBP8.23□□□□□ -1.09
MDM2-228ENST00000542502 USP17L24Q0WX57 530 aa8.23□□□□□ -1.09
MDM2-228ENST00000542502 RGS9O75916 674 aaPredicted RBP8.22□□□□□ -1.09
MDM2-228ENST00000542502 MAP3K6O95382 1288 aa8.22□□□□□ -1.09
MDM2-228ENST00000542502 GRNP28799 593 aaKnown RBP8.22□□□□□ -1.09
MDM2-228ENST00000542502 INPP5BP32019 993 aa8.22□□□□□ -1.09
MDM2-228ENST00000542502 PCSK7Q16549 785 aa8.22□□□□□ -1.09
MDM2-228ENST00000542502 FOXD4L6Q3SYB3 417 aaPredicted RBP8.22□□□□□ -1.09
MDM2-228ENST00000542502 FOXD4L3Q6VB84 417 aaPredicted RBP8.22□□□□□ -1.09
MDM2-228ENST00000542502 ILDR2Q71H61 639 aa8.22□□□□□ -1.09
MDM2-228ENST00000542502 TXNRD3Q86VQ6 643 aa8.22□□□□□ -1.09
MDM2-228ENST00000542502 VRTNQ9H8Y1 702 aa8.22□□□□□ -1.09
MDM2-228ENST00000542502 PRSS36Q5K4E3 855 aa8.21□□□□□ -1.1
MDM2-228ENST00000542502 SHISA2Q6UWI4 295 aa8.21□□□□□ -1.1
MDM2-228ENST00000542502 FAM35AQ86V20 835 aa8.21□□□□□ -1.1
MDM2-228ENST00000542502 FMR1NBQ8N0W7 255 aaPredicted RBP8.21□□□□□ -1.1
MDM2-228ENST00000542502 C11orf16Q9NQ32 467 aa8.21□□□□□ -1.1
MDM2-228ENST00000542502 KLK14Q9P0G3 267 aa8.21□□□□□ -1.1
MDM2-228ENST00000542502 SHROOM4Q9ULL8 1493 aa8.2□□□□□ -1.1
MDM2-228ENST00000542502 H2AFB1P0C5Y9 115 aa8.2□□□□□ -1.1
MDM2-228ENST00000542502 H2AFB2P0C5Z0 115 aa8.2□□□□□ -1.1
MDM2-228ENST00000542502 LMOD1P29536 600 aaPredicted RBP8.2□□□□□ -1.1
MDM2-228ENST00000542502 IDH3AP50213 366 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 224.3 ms