RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 TRAPPC3LQ5T215 181 aa10.61□□□□□ -0.71
SRGAP1-204ENST00000542381 BTLAQ7Z6A9 289 aa10.61□□□□□ -0.71
SRGAP1-204ENST00000542381 C2orf49Q9BVC5 232 aaPredicted RBP10.61□□□□□ -0.71
SRGAP1-204ENST00000542381 LILRB5O75023 590 aa10.6□□□□□ -0.71
SRGAP1-204ENST00000542381 FLIIQ13045 1269 aa10.6□□□□□ -0.71
SRGAP1-204ENST00000542381 CHMP7Q8WUX9 453 aaPredicted RBP10.6□□□□□ -0.71
SRGAP1-204ENST00000542381 SCG3Q8WXD2 468 aaKnown RBP10.6□□□□□ -0.71
SRGAP1-204ENST00000542381 NGLY1Q96IV0 654 aa10.6□□□□□ -0.71
SRGAP1-204ENST00000542381 NACC1Q96RE7 527 aa10.6□□□□□ -0.71
SRGAP1-204ENST00000542381 UBE2OQ9C0C9 1292 aaKnown RBP10.6□□□□□ -0.71
SRGAP1-204ENST00000542381 RBM19Q9Y4C8 960 aaKnown RBP10.59□□□□□ -0.71
SRGAP1-204ENST00000542381 RASA1P20936 1047 aa10.58□□□□□ -0.72
SRGAP1-204ENST00000542381 STAG2Q8N3U4 1231 aa10.58□□□□□ -0.72
SRGAP1-204ENST00000542381 NUDT8Q8WV74 236 aa10.58□□□□□ -0.72
SRGAP1-204ENST00000542381 SLC6A14Q9UN76 642 aa10.58□□□□□ -0.72
SRGAP1-204ENST00000542381 A0A0A0MRY4 1105 aa10.57□□□□□ -0.72
SRGAP1-204ENST00000542381 LGR5O75473 907 aa10.57□□□□□ -0.72
SRGAP1-204ENST00000542381 SELPP16109 830 aa10.57□□□□□ -0.72
SRGAP1-204ENST00000542381 GAS2L2Q8NHY3 880 aa10.57□□□□□ -0.72
SRGAP1-204ENST00000542381 TFIP11Q9UBB9 837 aaKnown RBP10.57□□□□□ -0.72
SRGAP1-204ENST00000542381 GSX2Q9BZM3 304 aa10.56□□□□□ -0.72
SRGAP1-204ENST00000542381 JPH1Q9HDC5 661 aaPredicted RBP10.56□□□□□ -0.72
SRGAP1-204ENST00000542381 SEC13P55735 322 aa10.55□□□□□ -0.72
SRGAP1-204ENST00000542381 ADGRE1Q14246 886 aa10.55□□□□□ -0.72
SRGAP1-204ENST00000542381 PSMG3-AS1Q96PY0 264 aa10.55□□□□□ -0.72
SRGAP1-204ENST00000542381 DNAJB12Q9NXW2 375 aaKnown RBP10.55□□□□□ -0.72
SRGAP1-204ENST00000542381 SCO2A0A1W2PP80 73 aa10.54□□□□□ -0.72
SRGAP1-204ENST00000542381 C9orf172C9J069 976 aa10.54□□□□□ -0.72
SRGAP1-204ENST00000542381 MBTPS1Q14703 1052 aa10.54□□□□□ -0.72
SRGAP1-204ENST00000542381 PRSS36Q5K4E3 855 aa10.54□□□□□ -0.72
SRGAP1-204ENST00000542381 SHISA2Q6UWI4 295 aa10.54□□□□□ -0.72
SRGAP1-204ENST00000542381 NAGPAQ9UK23 515 aa10.54□□□□□ -0.72
SRGAP1-204ENST00000542381 BCS1LQ9Y276 419 aa10.54□□□□□ -0.72
SRGAP1-204ENST00000542381 MAFBQ9Y5Q3 323 aaPredicted RBP10.54□□□□□ -0.72
SRGAP1-204ENST00000542381 ELNP15502 786 aa10.53□□□□□ -0.72
SRGAP1-204ENST00000542381 AFF1P51825 1210 aaKnown RBP10.53□□□□□ -0.72
SRGAP1-204ENST00000542381 PSAPL1Q6NUJ1 521 aa10.53□□□□□ -0.72
SRGAP1-204ENST00000542381 GLMNQ92990 594 aa10.53□□□□□ -0.72
SRGAP1-204ENST00000542381 CLUAP1Q96AJ1 413 aa10.53□□□□□ -0.72
SRGAP1-204ENST00000542381 HINFPQ9BQA5 517 aa10.53□□□□□ -0.72
SRGAP1-204ENST00000542381 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.53□□□□□ -0.72
SRGAP1-204ENST00000542381 NFKB1P19838 968 aa10.52□□□□□ -0.73
SRGAP1-204ENST00000542381 GRNP28799 593 aaKnown RBP10.52□□□□□ -0.73
SRGAP1-204ENST00000542381 CCINQ13939 588 aa10.52□□□□□ -0.73
SRGAP1-204ENST00000542381 HIF1AQ16665 826 aa10.52□□□□□ -0.73
SRGAP1-204ENST00000542381 DMGDHQ9UI17 866 aaKnown RBP10.52□□□□□ -0.73
SRGAP1-204ENST00000542381 RAC1P63000 192 aa10.51□□□□□ -0.73
SRGAP1-204ENST00000542381 RTN1Q16799 776 aa10.51□□□□□ -0.73
SRGAP1-204ENST00000542381 IER5Q5VY09 327 aa10.51□□□□□ -0.73
SRGAP1-204ENST00000542381 DMRTC2Q8IXT2 367 aaPredicted RBP10.51□□□□□ -0.73
SRGAP1-204ENST00000542381 PNMA5Q96PV4 448 aa10.51□□□□□ -0.73
SRGAP1-204ENST00000542381 TGFBR3LH3BV60 316 aa10.5□□□□□ -0.73
SRGAP1-204ENST00000542381 CRTC2Q53ET0 693 aaPredicted RBP10.5□□□□□ -0.73
SRGAP1-204ENST00000542381 ILDR2Q71H61 639 aa10.5□□□□□ -0.73
SRGAP1-204ENST00000542381 FNBP4Q8N3X1 1017 aaPredicted RBP10.5□□□□□ -0.73
SRGAP1-204ENST00000542381 LENG1Q96BZ8 264 aaPredicted RBP10.5□□□□□ -0.73
SRGAP1-204ENST00000542381 EFCC1Q9HA90 598 aa10.5□□□□□ -0.73
SRGAP1-204ENST00000542381 LARP1Q6PKG0 1096 aaKnown RBP10.49□□□□□ -0.73
SRGAP1-204ENST00000542381 TXNRD3Q86VQ6 643 aa10.49□□□□□ -0.73
SRGAP1-204ENST00000542381 RGS9O75916 674 aaPredicted RBP10.48□□□□□ -0.73
SRGAP1-204ENST00000542381 DPYDQ12882 1025 aa10.48□□□□□ -0.73
SRGAP1-204ENST00000542381 PTK7Q13308 1070 aa10.48□□□□□ -0.73
SRGAP1-204ENST00000542381 FMR1NBQ8N0W7 255 aaPredicted RBP10.48□□□□□ -0.73
SRGAP1-204ENST00000542381 KLK14Q9P0G3 267 aa10.48□□□□□ -0.73
SRGAP1-204ENST00000542381 H2AFB1P0C5Y9 115 aa10.47□□□□□ -0.73
SRGAP1-204ENST00000542381 H2AFB2P0C5Z0 115 aa10.47□□□□□ -0.73
SRGAP1-204ENST00000542381 ARTNQ5T4W7 220 aa10.47□□□□□ -0.73
SRGAP1-204ENST00000542381 KANK4Q5T7N3 995 aaPredicted RBP10.47□□□□□ -0.73
SRGAP1-204ENST00000542381 FAM35AQ86V20 835 aa10.47□□□□□ -0.73
SRGAP1-204ENST00000542381 CPB1P15086 417 aa10.46□□□□□ -0.73
SRGAP1-204ENST00000542381 NRG1Q02297 640 aaPredicted RBP10.46□□□□□ -0.73
SRGAP1-204ENST00000542381 PROSER2Q86WR7 435 aaPredicted RBP10.46□□□□□ -0.73
SRGAP1-204ENST00000542381 ZFP64Q9NPA5 681 aa10.46□□□□□ -0.73
SRGAP1-204ENST00000542381 ZFATQ9P243 1243 aa10.46□□□□□ -0.73
SRGAP1-204ENST00000542381 USP21Q9UK80 565 aa10.46□□□□□ -0.73
SRGAP1-204ENST00000542381 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.45□□□□□ -0.74
SRGAP1-204ENST00000542381 ZBTB42B2RXF5 422 aa10.45□□□□□ -0.74
SRGAP1-204ENST00000542381 IGFBP4P22692 258 aa10.45□□□□□ -0.74
SRGAP1-204ENST00000542381 INPP5BP32019 993 aa10.45□□□□□ -0.74
SRGAP1-204ENST00000542381 IDH3AP50213 366 aa10.45□□□□□ -0.74
SRGAP1-204ENST00000542381 PLAURQ03405 335 aa10.45□□□□□ -0.74
SRGAP1-204ENST00000542381 KRT25Q7Z3Z0 450 aa10.45□□□□□ -0.74
SRGAP1-204ENST00000542381 KRTAP9-2Q9BYQ4 174 aa10.45□□□□□ -0.74
SRGAP1-204ENST00000542381 GRIK5Q16478 980 aa10.44□□□□□ -0.74
SRGAP1-204ENST00000542381 TP53INP1Q96A56 240 aa10.44□□□□□ -0.74
SRGAP1-204ENST00000542381 PPP1R12CQ9BZL4 782 aa10.44□□□□□ -0.74
SRGAP1-204ENST00000542381 TARSP26639 723 aaKnown RBP10.43□□□□□ -0.74
SRGAP1-204ENST00000542381 PERM1Q5SV97 790 aa10.43□□□□□ -0.74
SRGAP1-204ENST00000542381 MSL1Q68DK7 614 aa10.43□□□□□ -0.74
SRGAP1-204ENST00000542381 ANKMY2Q8IV38 441 aa10.43□□□□□ -0.74
SRGAP1-204ENST00000542381 LPIN3Q9BQK8 851 aa10.43□□□□□ -0.74
SRGAP1-204ENST00000542381 SSBP4Q9BWG4 385 aaPredicted RBP10.43□□□□□ -0.74
SRGAP1-204ENST00000542381 USP17L15C9J2P7 530 aa10.42□□□□□ -0.74
SRGAP1-204ENST00000542381 USP17L10C9JJH3 530 aa10.42□□□□□ -0.74
SRGAP1-204ENST00000542381 USP17L13C9JLJ4 530 aa10.42□□□□□ -0.74
SRGAP1-204ENST00000542381 USP17L12C9JPN9 530 aa10.42□□□□□ -0.74
SRGAP1-204ENST00000542381 USP17L11C9JVI0 530 aa10.42□□□□□ -0.74
SRGAP1-204ENST00000542381 USP17L21D6R901 530 aa10.42□□□□□ -0.74
SRGAP1-204ENST00000542381 USP17L18D6R9N7 530 aa10.42□□□□□ -0.74
SRGAP1-204ENST00000542381 USP17L22D6RA61 530 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms