RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 ODF2LQ9ULJ1 636 aa16.11■□□□□ 0.17
TRPM1-203ENST00000542188 USH1CQ9Y6N9 552 aa16.11■□□□□ 0.17
TRPM1-203ENST00000542188 FYCO1Q9BQS8 1478 aa16.11■□□□□ 0.17
TRPM1-203ENST00000542188 RFC1P35251 1148 aaPredicted RBP16.11■□□□□ 0.17
TRPM1-203ENST00000542188 NUTM1Q86Y26 1132 aa16.11■□□□□ 0.17
TRPM1-203ENST00000542188 ANKRD30BQ9BXX2 1392 aa16.11■□□□□ 0.17
TRPM1-203ENST00000542188 NUTM2GQ5VZR2 741 aa16.11■□□□□ 0.17
TRPM1-203ENST00000542188 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.11■□□□□ 0.17
TRPM1-203ENST00000542188 VPS18Q9P253 973 aa16.11■□□□□ 0.17
TRPM1-203ENST00000542188 RPGRIP1LQ68CZ1 1315 aa16.11■□□□□ 0.17
TRPM1-203ENST00000542188 KIF5AQ12840 1032 aa16.1■□□□□ 0.17
TRPM1-203ENST00000542188 CFAP157Q5JU67 520 aa16.1■□□□□ 0.17
TRPM1-203ENST00000542188 CRACR2BQ8N4Y2 399 aaPredicted RBP16.1■□□□□ 0.17
TRPM1-203ENST00000542188 EXOC1Q9NV70 894 aa16.1■□□□□ 0.17
TRPM1-203ENST00000542188 NOLC1Q14978 699 aaKnown RBP eCLIP16.1■□□□□ 0.17
TRPM1-203ENST00000542188 RABGAP1Q9Y3P9 1069 aa16.1■□□□□ 0.17
TRPM1-203ENST00000542188 STX6O43752 255 aa16.1■□□□□ 0.17
TRPM1-203ENST00000542188 INTS8Q75QN2 995 aaKnown RBP16.1■□□□□ 0.17
TRPM1-203ENST00000542188 TRIM47Q96LD4 638 aa16.1■□□□□ 0.17
TRPM1-203ENST00000542188 SPAG1Q07617 926 aa16.1■□□□□ 0.17
TRPM1-203ENST00000542188 B4GALNT4Q76KP1 1039 aa16.1■□□□□ 0.17
TRPM1-203ENST00000542188 CATIPQ7Z7H3 387 aa16.1■□□□□ 0.17
TRPM1-203ENST00000542188 ABTB2Q8N961 1025 aa16.1■□□□□ 0.17
TRPM1-203ENST00000542188 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.1■□□□□ 0.17
TRPM1-203ENST00000542188 KRT13P13646 458 aa16.1■□□□□ 0.17
TRPM1-203ENST00000542188 UBASH3AP57075 661 aa16.1■□□□□ 0.17
TRPM1-203ENST00000542188 KRT83P78385 493 aa16.1■□□□□ 0.17
TRPM1-203ENST00000542188 GBP7Q8N8V2 638 aaPredicted RBP16.1■□□□□ 0.17
TRPM1-203ENST00000542188 HMGB1P1B2RPK0 211 aaPredicted RBP16.09■□□□□ 0.17
TRPM1-203ENST00000542188 TMEM87AQ8NBN3 555 aa16.09■□□□□ 0.17
TRPM1-203ENST00000542188 FAM76AQ8TAV0 307 aa16.09■□□□□ 0.17
TRPM1-203ENST00000542188 JAKMIP2Q96AA8 810 aa16.09■□□□□ 0.17
TRPM1-203ENST00000542188 BIN1O00499 593 aa16.09■□□□□ 0.17
TRPM1-203ENST00000542188 MYL6BP14649 208 aa16.09■□□□□ 0.17
TRPM1-203ENST00000542188 ATP5DP30049 168 aa16.09■□□□□ 0.17
TRPM1-203ENST00000542188 DNAI1Q9UI46 699 aa16.09■□□□□ 0.17
TRPM1-203ENST00000542188 ERCC6LQ2NKX8 1250 aa16.09■□□□□ 0.17
TRPM1-203ENST00000542188 LRSAM1Q6UWE0 723 aa16.09■□□□□ 0.17
TRPM1-203ENST00000542188 GSTA5Q7RTV2 222 aa16.09■□□□□ 0.17
TRPM1-203ENST00000542188 SYNCQ9H7C4 482 aa16.09■□□□□ 0.17
TRPM1-203ENST00000542188 ZNF853P0CG23 659 aa16.09■□□□□ 0.17
TRPM1-203ENST00000542188 GUCY1B3Q02153 619 aa16.09■□□□□ 0.17
TRPM1-203ENST00000542188 CLCN1P35523 988 aa16.09■□□□□ 0.17
TRPM1-203ENST00000542188 ZNF444Q8N0Y2 327 aaPredicted RBP16.09■□□□□ 0.17
TRPM1-203ENST00000542188 SPAG5Q96R06 1193 aa16.08■□□□□ 0.17
TRPM1-203ENST00000542188 ZNF213O14771 459 aa16.08■□□□□ 0.16
TRPM1-203ENST00000542188 HMGB2P26583 209 aaKnown RBP16.08■□□□□ 0.16
TRPM1-203ENST00000542188 CCDC14Q49A88 953 aa16.08■□□□□ 0.16
TRPM1-203ENST00000542188 MTRF1LQ9UGC7 380 aaKnown RBP16.08■□□□□ 0.16
TRPM1-203ENST00000542188 MINDY4BA8MYZ0 360 aa16.08■□□□□ 0.16
TRPM1-203ENST00000542188 GJB2P29033 226 aa16.08■□□□□ 0.16
TRPM1-203ENST00000542188 OGFRQ9NZT2 677 aa16.08■□□□□ 0.16
TRPM1-203ENST00000542188 POLA1P09884 1462 aaPredicted RBP16.08■□□□□ 0.16
TRPM1-203ENST00000542188 CAVIN4Q5BKX8 364 aa16.08■□□□□ 0.16
TRPM1-203ENST00000542188 POTEDQ86YR6 584 aa16.08■□□□□ 0.16
TRPM1-203ENST00000542188 ZNF526Q8TF50 670 aaPredicted RBP16.08■□□□□ 0.16
TRPM1-203ENST00000542188 SKILP12757 684 aa16.07■□□□□ 0.16
TRPM1-203ENST00000542188 PCK1P35558 622 aa16.07■□□□□ 0.16
TRPM1-203ENST00000542188 KLHL40Q2TBA0 621 aa16.07■□□□□ 0.16
TRPM1-203ENST00000542188 METTL24Q5JXM2 366 aa16.07■□□□□ 0.16
TRPM1-203ENST00000542188 RNF168Q8IYW5 571 aaPredicted RBP16.07■□□□□ 0.16
TRPM1-203ENST00000542188 TBCAO75347 108 aaKnown RBP16.07■□□□□ 0.16
TRPM1-203ENST00000542188 IDEP14735 1019 aa16.07■□□□□ 0.16
TRPM1-203ENST00000542188 SNX16P57768 344 aa16.07■□□□□ 0.16
TRPM1-203ENST00000542188 NEDD9Q14511 834 aa16.07■□□□□ 0.16
TRPM1-203ENST00000542188 FAM114A2Q9NRY5 505 aa16.07■□□□□ 0.16
TRPM1-203ENST00000542188 MYOM3Q5VTT5 1437 aa16.07■□□□□ 0.16
TRPM1-203ENST00000542188 TTC36A6NLP5 189 aa16.07■□□□□ 0.16
TRPM1-203ENST00000542188 TSNAXIP1Q2TAA8 658 aa16.07■□□□□ 0.16
TRPM1-203ENST00000542188 ZSCAN23Q3MJ62 389 aa16.07■□□□□ 0.16
TRPM1-203ENST00000542188 CEP85LQ5SZL2 805 aa16.07■□□□□ 0.16
TRPM1-203ENST00000542188 ZSCAN16Q9H4T2 348 aaPredicted RBP16.07■□□□□ 0.16
TRPM1-203ENST00000542188 C10orf67Q8IYJ2 551 aa16.07■□□□□ 0.16
TRPM1-203ENST00000542188 STMN1P16949 149 aa16.06■□□□□ 0.16
TRPM1-203ENST00000542188 CLNS1AP54105 237 aaKnown RBP16.06■□□□□ 0.16
TRPM1-203ENST00000542188 MAP3K12Q12852 859 aa16.06■□□□□ 0.16
TRPM1-203ENST00000542188 CEP128Q6ZU80 1094 aa16.06■□□□□ 0.16
TRPM1-203ENST00000542188 PDS5BQ9NTI5 1447 aa16.06■□□□□ 0.16
TRPM1-203ENST00000542188 WDHD1O75717 1129 aaPredicted RBP16.06■□□□□ 0.16
TRPM1-203ENST00000542188 ZNF530Q6P9A1 599 aaPredicted RBP16.06■□□□□ 0.16
TRPM1-203ENST00000542188 SUDS3Q9H7L9 328 aaPredicted RBP16.06■□□□□ 0.16
TRPM1-203ENST00000542188 RNF216Q9NWF9 866 aaPredicted RBP16.06■□□□□ 0.16
TRPM1-203ENST00000542188 KRT86O43790 486 aa16.06■□□□□ 0.16
TRPM1-203ENST00000542188 IFIT1P09914 478 aaKnown RBP16.06■□□□□ 0.16
TRPM1-203ENST00000542188 UBA7P41226 1012 aa16.06■□□□□ 0.16
TRPM1-203ENST00000542188 HDXQ7Z353 690 aa16.06■□□□□ 0.16
TRPM1-203ENST00000542188 PPP1R9BQ96SB3 815 aa16.06■□□□□ 0.16
TRPM1-203ENST00000542188 VCXQ9H320 206 aa16.06■□□□□ 0.16
TRPM1-203ENST00000542188 TXNDC16Q9P2K2 825 aa16.06■□□□□ 0.16
TRPM1-203ENST00000542188 BMP15O95972 392 aa16.06■□□□□ 0.16
TRPM1-203ENST00000542188 TCHPQ9BT92 498 aa16.05■□□□□ 0.16
TRPM1-203ENST00000542188 IFIT3O14879 490 aaKnown RBP16.05■□□□□ 0.16
TRPM1-203ENST00000542188 ABCF2Q9UG63 623 aa16.05■□□□□ 0.16
TRPM1-203ENST00000542188 ZEB2O60315 1214 aa16.05■□□□□ 0.16
TRPM1-203ENST00000542188 GIGYF1O75420 1035 aaPredicted RBP16.05■□□□□ 0.16
TRPM1-203ENST00000542188 SH3BGRP55822 239 aaPredicted RBP16.05■□□□□ 0.16
TRPM1-203ENST00000542188 SULT6B1Q6IMI4 303 aa16.05■□□□□ 0.16
TRPM1-203ENST00000542188 SLF2Q8IX21 1173 aa16.05■□□□□ 0.16
TRPM1-203ENST00000542188 KCNK9Q9NPC2 374 aa16.05■□□□□ 0.16
TRPM1-203ENST00000542188 A6NNZ2 444 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms