RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 C4AP0C0L4 1744 aa21.59■■□□□ 1.05
GTDC1-219ENST00000542155 TRAPPC3LQ5T215 181 aa21.58■■□□□ 1.05
GTDC1-219ENST00000542155 RPAP2Q8IXW5 612 aaPredicted RBP21.58■■□□□ 1.05
GTDC1-219ENST00000542155 AKT1S1Q96B36 256 aa21.58■■□□□ 1.05
GTDC1-219ENST00000542155 ATP8B2P98198 1209 aa21.57■■□□□ 1.04
GTDC1-219ENST00000542155 FAM89AQ96GI7 184 aa21.57■■□□□ 1.04
GTDC1-219ENST00000542155 BICC1Q9H694 974 aaKnown RBP21.57■■□□□ 1.04
GTDC1-219ENST00000542155 RGPD3A6NKT7 1758 aaPredicted RBP21.57■■□□□ 1.04
GTDC1-219ENST00000542155 RGPD4Q7Z3J3 1758 aa21.57■■□□□ 1.04
GTDC1-219ENST00000542155 HSP90AB3PQ58FF7 597 aa21.56■■□□□ 1.04
GTDC1-219ENST00000542155 SUSD4Q5VX71 490 aa21.55■■□□□ 1.04
GTDC1-219ENST00000542155 PPP1R42Q7Z4L9 355 aa21.55■■□□□ 1.04
GTDC1-219ENST00000542155 FAM177BA6PVY3 158 aa21.55■■□□□ 1.04
GTDC1-219ENST00000542155 TBC1D9BQ66K14 1250 aa21.55■■□□□ 1.04
GTDC1-219ENST00000542155 NIP7Q9Y221 180 aaKnown RBP eCLIP21.55■■□□□ 1.04
GTDC1-219ENST00000542155 SCN7AQ01118 1682 aa21.55■■□□□ 1.04
GTDC1-219ENST00000542155 RFC4P35249 363 aa21.54■■□□□ 1.04
GTDC1-219ENST00000542155 USP42Q9H9J4 1324 aaKnown RBP21.54■■□□□ 1.04
GTDC1-219ENST00000542155 TUBGCP6Q96RT7 1819 aa21.54■■□□□ 1.04
GTDC1-219ENST00000542155 ZPR1O75312 459 aa21.54■■□□□ 1.04
GTDC1-219ENST00000542155 CLEC4GQ6UXB4 293 aa21.54■■□□□ 1.04
GTDC1-219ENST00000542155 ANO8Q9HCE9 1232 aaPredicted RBP21.54■■□□□ 1.04
GTDC1-219ENST00000542155 BICDL1Q6ZP65 573 aa21.53■■□□□ 1.04
GTDC1-219ENST00000542155 TFCP2L1Q9NZI6 479 aa21.53■■□□□ 1.04
GTDC1-219ENST00000542155 SMC5Q8IY18 1101 aa21.53■■□□□ 1.04
GTDC1-219ENST00000542155 SSFA2P28290 1259 aa21.52■■□□□ 1.04
GTDC1-219ENST00000542155 FOXO4P98177 505 aa21.52■■□□□ 1.04
GTDC1-219ENST00000542155 ZBTB38Q8NAP3 1195 aaPredicted RBP21.52■■□□□ 1.04
GTDC1-219ENST00000542155 PCCAP05165 728 aaPredicted RBP21.52■■□□□ 1.04
GTDC1-219ENST00000542155 SRGAP3O43295 1099 aa21.52■■□□□ 1.03
GTDC1-219ENST00000542155 ADRA2BP18089 450 aa21.52■■□□□ 1.03
GTDC1-219ENST00000542155 SF3B2Q13435 895 aaKnown RBP21.52■■□□□ 1.03
GTDC1-219ENST00000542155 SSH3Q8TE77 659 aa21.52■■□□□ 1.03
GTDC1-219ENST00000542155 TRMT112Q9UI30 125 aaKnown RBP21.52■■□□□ 1.03
GTDC1-219ENST00000542155 POLA2Q14181 598 aa21.51■■□□□ 1.03
GTDC1-219ENST00000542155 DCTPP1Q9H773 170 aa21.51■■□□□ 1.03
GTDC1-219ENST00000542155 ZNF652Q9Y2D9 606 aa21.51■■□□□ 1.03
GTDC1-219ENST00000542155 BAG6P46379 1132 aa21.51■■□□□ 1.03
GTDC1-219ENST00000542155 COL23A1Q86Y22 540 aaPredicted RBP21.51■■□□□ 1.03
GTDC1-219ENST00000542155 MTX1Q13505 466 aa21.5■■□□□ 1.03
GTDC1-219ENST00000542155 PDZRN3Q9UPQ7 1066 aa21.5■■□□□ 1.03
GTDC1-219ENST00000542155 GYS1P13807 737 aa21.49■■□□□ 1.03
GTDC1-219ENST00000542155 NUTM1Q86Y26 1132 aa21.49■■□□□ 1.03
GTDC1-219ENST00000542155 NTSR2O95665 410 aa21.49■■□□□ 1.03
GTDC1-219ENST00000542155 RABL6Q3YEC7 729 aaPredicted RBP21.49■■□□□ 1.03
GTDC1-219ENST00000542155 LMBR1LQ6UX01 489 aa21.48■■□□□ 1.03
GTDC1-219ENST00000542155 EXOC6BQ9Y2D4 811 aa21.48■■□□□ 1.03
GTDC1-219ENST00000542155 PNPLA7Q6ZV29 1317 aa21.48■■□□□ 1.03
GTDC1-219ENST00000542155 KLHDC4Q8TBB5 520 aa21.48■■□□□ 1.03
GTDC1-219ENST00000542155 PA2G4Q9UQ80 394 aaKnown RBP21.48■■□□□ 1.03
GTDC1-219ENST00000542155 UTP14AQ9BVJ6 771 aaKnown RBP21.47■■□□□ 1.03
GTDC1-219ENST00000542155 APBB1O00213 710 aa21.47■■□□□ 1.03
GTDC1-219ENST00000542155 PARP10Q53GL7 1025 aa21.47■■□□□ 1.03
GTDC1-219ENST00000542155 IRS4O14654 1257 aaPredicted RBP21.46■■□□□ 1.03
GTDC1-219ENST00000542155 RGL2O15211 777 aa21.46■■□□□ 1.03
GTDC1-219ENST00000542155 HMMRO75330 724 aa21.46■■□□□ 1.03
GTDC1-219ENST00000542155 HCLS1P14317 486 aaPredicted RBP21.46■■□□□ 1.03
GTDC1-219ENST00000542155 NFIXQ14938 502 aa21.46■■□□□ 1.03
GTDC1-219ENST00000542155 SLC15A2Q16348 729 aa21.46■■□□□ 1.03
GTDC1-219ENST00000542155 GCC1Q96CN9 775 aa21.46■■□□□ 1.03
GTDC1-219ENST00000542155 CCDC85AQ96PX6 553 aaPredicted RBP21.46■■□□□ 1.03
GTDC1-219ENST00000542155 HDAC5Q9UQL6 1122 aa21.46■■□□□ 1.03
GTDC1-219ENST00000542155 CDHR2Q9BYE9 1310 aa21.46■■□□□ 1.03
GTDC1-219ENST00000542155 SETDB2Q96T68 719 aa21.45■■□□□ 1.02
GTDC1-219ENST00000542155 RFX5P48382 616 aaPredicted RBP21.44■■□□□ 1.02
GTDC1-219ENST00000542155 ANKRD45Q5TZF3 282 aa21.44■■□□□ 1.02
GTDC1-219ENST00000542155 CCDC24Q8N4L8 307 aa21.44■■□□□ 1.02
GTDC1-219ENST00000542155 PLA2G12BQ9BX93 195 aa21.44■■□□□ 1.02
GTDC1-219ENST00000542155 SMARCA5O60264 1052 aaPredicted RBP21.44■■□□□ 1.02
GTDC1-219ENST00000542155 NUCB1Q02818 461 aa21.44■■□□□ 1.02
GTDC1-219ENST00000542155 ERFEQ4G0M1 354 aa21.44■■□□□ 1.02
GTDC1-219ENST00000542155 PDGFDQ9GZP0 370 aaPredicted RBP21.44■■□□□ 1.02
GTDC1-219ENST00000542155 SH3TC1Q8TE82 1336 aa21.44■■□□□ 1.02
GTDC1-219ENST00000542155 MSH5O43196 834 aa21.43■■□□□ 1.02
GTDC1-219ENST00000542155 BCL11AQ9H165 835 aa21.43■■□□□ 1.02
GTDC1-219ENST00000542155 PDE4AP27815 886 aa21.43■■□□□ 1.02
GTDC1-219ENST00000542155 CCDC125Q86Z20 511 aa21.43■■□□□ 1.02
GTDC1-219ENST00000542155 LNPKQ9C0E8 428 aa21.43■■□□□ 1.02
GTDC1-219ENST00000542155 COL24A1Q17RW2 1714 aa21.43■■□□□ 1.02
GTDC1-219ENST00000542155 SURF6O75683 361 aaKnown RBP21.42■■□□□ 1.02
GTDC1-219ENST00000542155 HMGB2P26583 209 aaKnown RBP21.42■■□□□ 1.02
GTDC1-219ENST00000542155 UPF1Q92900 1129 aaKnown RBP eCLIP21.42■■□□□ 1.02
GTDC1-219ENST00000542155 CHMP3Q9Y3E7 222 aa21.42■■□□□ 1.02
GTDC1-219ENST00000542155 DDX60Q8IY21 1712 aaKnown RBP21.42■■□□□ 1.02
GTDC1-219ENST00000542155 CSF1RP07333 972 aa21.42■■□□□ 1.02
GTDC1-219ENST00000542155 TTLL11Q8NHH1 800 aa21.42■■□□□ 1.02
GTDC1-219ENST00000542155 TM4SF1P30408 202 aa21.42■■□□□ 1.02
GTDC1-219ENST00000542155 RGS3P49796 1198 aa21.42■■□□□ 1.02
GTDC1-219ENST00000542155 C3orf67Q6ZVT6 689 aa21.42■■□□□ 1.02
GTDC1-219ENST00000542155 PTPN12Q05209 780 aaKnown RBP21.41■■□□□ 1.02
GTDC1-219ENST00000542155 CHD1LQ86WJ1 897 aa21.41■■□□□ 1.02
GTDC1-219ENST00000542155 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.41■■□□□ 1.02
GTDC1-219ENST00000542155 FAM161AQ3B820 660 aa21.41■■□□□ 1.02
GTDC1-219ENST00000542155 C16orf71Q8IYS4 520 aaPredicted RBP21.41■■□□□ 1.02
GTDC1-219ENST00000542155 STK32BQ9NY57 414 aa21.41■■□□□ 1.02
GTDC1-219ENST00000542155 ABCC12Q96J65 1359 aa21.4■■□□□ 1.02
GTDC1-219ENST00000542155 MYH3P11055 1940 aa21.4■■□□□ 1.02
GTDC1-219ENST00000542155 PDE8AO60658 829 aa21.4■■□□□ 1.02
GTDC1-219ENST00000542155 ZNF594Q96JF6 807 aaPredicted RBP21.4■■□□□ 1.02
GTDC1-219ENST00000542155 SIL1Q9H173 461 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms