RNA–Protein interactions for RNA: ENST00000542040.1

TRPT1-212, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 914 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-212ENST00000542040 RIC1Q4ADV7 1423 aa22.61■■□□□ 1.21
TRPT1-212ENST00000542040 CRAMP1Q96RY5 1269 aa22.61■■□□□ 1.21
TRPT1-212ENST00000542040 UBN2Q6ZU65 1347 aa22.6■■□□□ 1.21
TRPT1-212ENST00000542040 NTSR2O95665 410 aa22.6■■□□□ 1.21
TRPT1-212ENST00000542040 DUSP27Q5VZP5 1158 aa22.6■■□□□ 1.21
TRPT1-212ENST00000542040 ANKRD13DQ6ZTN6 518 aa22.6■■□□□ 1.21
TRPT1-212ENST00000542040 SBF1O95248 1867 aa22.6■■□□□ 1.21
TRPT1-212ENST00000542040 IQCA1LA6NCM1 817 aa22.59■■□□□ 1.21
TRPT1-212ENST00000542040 ANXA1P04083 346 aa22.59■■□□□ 1.21
TRPT1-212ENST00000542040 HSP90B1P14625 803 aaKnown RBP22.59■■□□□ 1.21
TRPT1-212ENST00000542040 PROSER3Q2NL68 480 aa22.59■■□□□ 1.21
TRPT1-212ENST00000542040 SLC10A5Q5PT55 438 aa22.59■■□□□ 1.21
TRPT1-212ENST00000542040 LRP10Q7Z4F1 713 aa22.59■■□□□ 1.21
TRPT1-212ENST00000542040 PLBD2Q8NHP8 589 aa22.59■■□□□ 1.21
TRPT1-212ENST00000542040 JDP2Q8WYK2 163 aa22.59■■□□□ 1.21
TRPT1-212ENST00000542040 MBIPQ9NS73 344 aa22.59■■□□□ 1.21
TRPT1-212ENST00000542040 CHPF2Q9P2E5 772 aa22.59■■□□□ 1.21
TRPT1-212ENST00000542040 PRELPP51888 382 aa22.58■■□□□ 1.21
TRPT1-212ENST00000542040 PSMD1Q99460 953 aa22.58■■□□□ 1.21
TRPT1-212ENST00000542040 TRMT112Q9UI30 125 aaKnown RBP22.58■■□□□ 1.21
TRPT1-212ENST00000542040 COL11A2P13942 1736 aaPredicted RBP22.57■■□□□ 1.2
TRPT1-212ENST00000542040 SYNE4Q8N205 404 aa22.57■■□□□ 1.2
TRPT1-212ENST00000542040 TNRC6CQ9HCJ0 1690 aaKnown RBP22.57■■□□□ 1.2
TRPT1-212ENST00000542040 SH3TC1Q8TE82 1336 aa22.57■■□□□ 1.2
TRPT1-212ENST00000542040 ZNF853P0CG23 659 aa22.56■■□□□ 1.2
TRPT1-212ENST00000542040 GOLGA2Q08379 1002 aa22.56■■□□□ 1.2
TRPT1-212ENST00000542040 NLRP10Q86W26 655 aa22.56■■□□□ 1.2
TRPT1-212ENST00000542040 NUP98P52948 1817 aa22.56■■□□□ 1.2
TRPT1-212ENST00000542040 SLX4Q8IY92 1834 aa22.55■■□□□ 1.2
TRPT1-212ENST00000542040 ABCC12Q96J65 1359 aa22.55■■□□□ 1.2
TRPT1-212ENST00000542040 PPEF1O14829 653 aaPredicted RBP22.55■■□□□ 1.2
TRPT1-212ENST00000542040 BBOX1O75936 387 aa22.55■■□□□ 1.2
TRPT1-212ENST00000542040 IARSP41252 1262 aaKnown RBP22.55■■□□□ 1.2
TRPT1-212ENST00000542040 KRT24Q2M2I5 525 aa22.55■■□□□ 1.2
TRPT1-212ENST00000542040 DDX46Q7L014 1031 aaKnown RBP22.55■■□□□ 1.2
TRPT1-212ENST00000542040 ZNF277Q9NRM2 450 aaPredicted RBP22.55■■□□□ 1.2
TRPT1-212ENST00000542040 DDX58O95786 925 aaKnown RBP22.54■■□□□ 1.2
TRPT1-212ENST00000542040 CCDC27Q2M243 656 aa22.54■■□□□ 1.2
TRPT1-212ENST00000542040 NCBP3Q53F19 620 aaKnown RBP22.54■■□□□ 1.2
TRPT1-212ENST00000542040 CCDC30Q5VVM6 783 aa22.54■■□□□ 1.2
TRPT1-212ENST00000542040 RIC3Q7Z5B4 369 aa22.54■■□□□ 1.2
TRPT1-212ENST00000542040 SUPT20HQ8NEM7 779 aa22.54■■□□□ 1.2
TRPT1-212ENST00000542040 VPS33BQ9H267 617 aa22.54■■□□□ 1.2
TRPT1-212ENST00000542040 MRS2Q9HD23 443 aa22.54■■□□□ 1.2
TRPT1-212ENST00000542040 ARFGEF2Q9Y6D5 1785 aa22.53■■□□□ 1.2
TRPT1-212ENST00000542040 TMC4Q7Z404 712 aa22.53■■□□□ 1.2
TRPT1-212ENST00000542040 FER1L6Q2WGJ9 1857 aa22.53■■□□□ 1.2
TRPT1-212ENST00000542040 EIF6P56537 245 aaKnown RBP22.52■■□□□ 1.2
TRPT1-212ENST00000542040 DDNO94850 711 aaPredicted RBP22.51■■□□□ 1.19
TRPT1-212ENST00000542040 ATP6V0A2Q9Y487 856 aa22.5■■□□□ 1.19
TRPT1-212ENST00000542040 ELL2O00472 640 aaPredicted RBP22.49■■□□□ 1.19
TRPT1-212ENST00000542040 TRIM28Q13263 835 aaKnown RBP22.49■■□□□ 1.19
TRPT1-212ENST00000542040 LARGE2Q8N3Y3 721 aa22.49■■□□□ 1.19
TRPT1-212ENST00000542040 L3MBTL3Q96JM7 780 aaPredicted RBP22.49■■□□□ 1.19
TRPT1-212ENST00000542040 STK31Q9BXU1 1019 aa22.49■■□□□ 1.19
TRPT1-212ENST00000542040 TIAM2Q8IVF5 1701 aa22.48■■□□□ 1.19
TRPT1-212ENST00000542040 TCERG1O14776 1098 aaKnown RBP22.48■■□□□ 1.19
TRPT1-212ENST00000542040 HCLS1P14317 486 aaPredicted RBP22.48■■□□□ 1.19
TRPT1-212ENST00000542040 SP8Q8IXZ3 490 aa22.48■■□□□ 1.19
TRPT1-212ENST00000542040 FZD9O00144 591 aa22.47■■□□□ 1.19
TRPT1-212ENST00000542040 OLFM4Q6UX06 510 aa22.47■■□□□ 1.19
TRPT1-212ENST00000542040 PNMA8AQ86V59 439 aaPredicted RBP22.47■■□□□ 1.19
TRPT1-212ENST00000542040 NIM1KQ8IY84 436 aa22.47■■□□□ 1.19
TRPT1-212ENST00000542040 GPC2Q8N158 579 aa22.47■■□□□ 1.19
TRPT1-212ENST00000542040 ISCA1Q9BUE6 129 aa22.47■■□□□ 1.19
TRPT1-212ENST00000542040 HACL1Q9UJ83 578 aa22.47■■□□□ 1.19
TRPT1-212ENST00000542040 CCDC88AQ3V6T2 1871 aa22.47■■□□□ 1.19
TRPT1-212ENST00000542040 DICER1Q9UPY3 1922 aaKnown RBP22.47■■□□□ 1.19
TRPT1-212ENST00000542040 WDR90Q96KV7 1748 aa22.46■■□□□ 1.19
TRPT1-212ENST00000542040 CACNA1SQ13698 1873 aa22.46■■□□□ 1.19
TRPT1-212ENST00000542040 GRAPQ13588 217 aa22.46■■□□□ 1.19
TRPT1-212ENST00000542040 CHADLQ6NUI6 762 aa22.46■■□□□ 1.19
TRPT1-212ENST00000542040 DPP8Q6V1X1 898 aaPredicted RBP22.46■■□□□ 1.19
TRPT1-212ENST00000542040 GRAPLQ8TC17 118 aaPredicted RBP22.46■■□□□ 1.19
TRPT1-212ENST00000542040 IL16Q14005 1332 aa22.46■■□□□ 1.19
TRPT1-212ENST00000542040 POTECB2RU33 542 aa22.45■■□□□ 1.18
TRPT1-212ENST00000542040 ATP5J2-PTCD1G3V325 749 aa22.45■■□□□ 1.18
TRPT1-212ENST00000542040 LMOD1P29536 600 aaPredicted RBP22.45■■□□□ 1.18
TRPT1-212ENST00000542040 WWC1Q8IX03 1113 aa22.45■■□□□ 1.18
TRPT1-212ENST00000542040 MPNDQ8N594 471 aa22.45■■□□□ 1.18
TRPT1-212ENST00000542040 ABCC4O15439 1325 aa22.45■■□□□ 1.18
TRPT1-212ENST00000542040 LDHDQ86WU2 507 aa22.44■■□□□ 1.18
TRPT1-212ENST00000542040 C8orf58Q8NAV2 365 aa22.44■■□□□ 1.18
TRPT1-212ENST00000542040 PPIP5K2O43314 1243 aa22.43■■□□□ 1.18
TRPT1-212ENST00000542040 NEXNQ0ZGT2 675 aa22.43■■□□□ 1.18
TRPT1-212ENST00000542040 C3orf67Q6ZVT6 689 aa22.43■■□□□ 1.18
TRPT1-212ENST00000542040 ZBTB38Q8NAP3 1195 aaPredicted RBP22.43■■□□□ 1.18
TRPT1-212ENST00000542040 CCDC191Q8NCU4 936 aa22.43■■□□□ 1.18
TRPT1-212ENST00000542040 FAM89AQ96GI7 184 aa22.43■■□□□ 1.18
TRPT1-212ENST00000542040 CLEC11AQ9Y240 323 aa22.43■■□□□ 1.18
TRPT1-212ENST00000542040 IRS4O14654 1257 aaPredicted RBP22.42■■□□□ 1.18
TRPT1-212ENST00000542040 SF3B3Q15393 1217 aaKnown RBP22.42■■□□□ 1.18
TRPT1-212ENST00000542040 WDR63Q8IWG1 891 aa22.42■■□□□ 1.18
TRPT1-212ENST00000542040 TAF1DQ9H5J8 278 aaPredicted RBP22.42■■□□□ 1.18
TRPT1-212ENST00000542040 CCDC184Q52MB2 194 aa22.41■■□□□ 1.18
TRPT1-212ENST00000542040 DNAJC5GQ8N7S2 189 aa22.41■■□□□ 1.18
TRPT1-212ENST00000542040 KLRG1Q96E93 195 aa22.41■■□□□ 1.18
TRPT1-212ENST00000542040 MYD88Q99836 296 aa22.41■■□□□ 1.18
TRPT1-212ENST00000542040 PHAXQ9H814 394 aaKnown RBP22.41■■□□□ 1.18
TRPT1-212ENST00000542040 CWC25Q9NXE8 425 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms