RNA–Protein interactions for RNA: ENST00000541869.5

POLR1B-217, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 5,059 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-217ENST00000541869 SLC5A4Q9NY91 659 aa12.13□□□□□ -0.47
POLR1B-217ENST00000541869 GRIN3BO60391 1043 aa12.13□□□□□ -0.47
POLR1B-217ENST00000541869 MX1P20591 662 aa12.13□□□□□ -0.47
POLR1B-217ENST00000541869 NEK4P51957 841 aa12.13□□□□□ -0.47
POLR1B-217ENST00000541869 CWC27Q6UX04 472 aaKnown RBP12.13□□□□□ -0.47
POLR1B-217ENST00000541869 WASF1Q92558 559 aa12.13□□□□□ -0.47
POLR1B-217ENST00000541869 PICALMQ13492 652 aa12.12□□□□□ -0.47
POLR1B-217ENST00000541869 CCDC8Q9H0W5 538 aaPredicted RBP12.12□□□□□ -0.47
POLR1B-217ENST00000541869 SPC25Q9HBM1 224 aa12.12□□□□□ -0.47
POLR1B-217ENST00000541869 PRKAG2Q9UGJ0 569 aa12.12□□□□□ -0.47
POLR1B-217ENST00000541869 ERVV-2B6SEH9 535 aa12.12□□□□□ -0.47
POLR1B-217ENST00000541869 GZF1Q9H116 711 aaPredicted RBP12.12□□□□□ -0.47
POLR1B-217ENST00000541869 CCDC196A0A1B0GTZ2 297 aa12.12□□□□□ -0.47
POLR1B-217ENST00000541869 TESK2Q96S53 571 aa12.12□□□□□ -0.47
POLR1B-217ENST00000541869 BABAM1Q9NWV8 329 aa12.12□□□□□ -0.47
POLR1B-217ENST00000541869 PPP1R12BO60237 982 aaPredicted RBP12.12□□□□□ -0.47
POLR1B-217ENST00000541869 HSPA1LP34931 641 aa12.12□□□□□ -0.47
POLR1B-217ENST00000541869 FBXO41Q8TF61 875 aa12.12□□□□□ -0.47
POLR1B-217ENST00000541869 SH3TC1Q8TE82 1336 aa12.12□□□□□ -0.47
POLR1B-217ENST00000541869 ZNF790Q6PG37 636 aa12.11□□□□□ -0.47
POLR1B-217ENST00000541869 MPNDQ8N594 471 aa12.11□□□□□ -0.47
POLR1B-217ENST00000541869 JMYQ8N9B5 988 aa12.11□□□□□ -0.47
POLR1B-217ENST00000541869 LINS1Q8NG48 757 aa12.11□□□□□ -0.47
POLR1B-217ENST00000541869 TTC37Q6PGP7 1564 aa12.11□□□□□ -0.47
POLR1B-217ENST00000541869 ATP2B3Q16720 1220 aa12.11□□□□□ -0.47
POLR1B-217ENST00000541869 POLR3AO14802 1390 aaPredicted RBP12.11□□□□□ -0.47
POLR1B-217ENST00000541869 TSPY2A6NKD2 308 aa12.11□□□□□ -0.47
POLR1B-217ENST00000541869 GRM8O00222 908 aa12.11□□□□□ -0.47
POLR1B-217ENST00000541869 LPXNO60711 386 aa12.11□□□□□ -0.47
POLR1B-217ENST00000541869 IPO9Q96P70 1041 aaKnown RBP12.11□□□□□ -0.47
POLR1B-217ENST00000541869 RBM19Q9Y4C8 960 aaKnown RBP12.11□□□□□ -0.47
POLR1B-217ENST00000541869 NKTRP30414 1462 aaKnown RBP12.11□□□□□ -0.47
POLR1B-217ENST00000541869 NEBLO76041 1014 aa12.11□□□□□ -0.47
POLR1B-217ENST00000541869 RABEP1Q15276 862 aa12.11□□□□□ -0.47
POLR1B-217ENST00000541869 DLGAP5Q15398 846 aa12.11□□□□□ -0.47
POLR1B-217ENST00000541869 SKOR2Q2VWA4 1001 aaPredicted RBP12.11□□□□□ -0.47
POLR1B-217ENST00000541869 PIBF1Q8WXW3 757 aa12.11□□□□□ -0.47
POLR1B-217ENST00000541869 CCDC178Q5BJE1 867 aa12.1□□□□□ -0.47
POLR1B-217ENST00000541869 USP48Q86UV5 1035 aa12.1□□□□□ -0.47
POLR1B-217ENST00000541869 ZNF396Q96N95 335 aaPredicted RBP12.1□□□□□ -0.47
POLR1B-217ENST00000541869 DDX49Q9Y6V7 483 aaKnown RBP12.1□□□□□ -0.47
POLR1B-217ENST00000541869 IL15P40933 162 aaPredicted RBP12.1□□□□□ -0.47
POLR1B-217ENST00000541869 LMBR1LQ6UX01 489 aa12.1□□□□□ -0.47
POLR1B-217ENST00000541869 PRKG1Q13976 671 aa12.1□□□□□ -0.47
POLR1B-217ENST00000541869 DALRD3Q5D0E6 543 aaKnown RBP12.1□□□□□ -0.47
POLR1B-217ENST00000541869 SLC52A2Q9HAB3 445 aa12.1□□□□□ -0.47
POLR1B-217ENST00000541869 PABPC4Q13310 644 aaKnown RBP eCLIP12.1□□□□□ -0.471e-6■□□□□ 9.5
POLR1B-217ENST00000541869 CCDC12Q8WUD4 166 aaPredicted RBP12.1□□□□□ -0.47
POLR1B-217ENST00000541869 KDM5CP41229 1560 aa12.09□□□□□ -0.47
POLR1B-217ENST00000541869 NCBP1Q09161 790 aaKnown RBP12.09□□□□□ -0.47
POLR1B-217ENST00000541869 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
POLR1B-217ENST00000541869 JARID2Q92833 1246 aaPredicted RBP12.09□□□□□ -0.47
POLR1B-217ENST00000541869 SPATA31A6Q5VVP1 1343 aa12.09□□□□□ -0.47
POLR1B-217ENST00000541869 PIP4K2AP48426 406 aaPredicted RBP12.09□□□□□ -0.47
POLR1B-217ENST00000541869 DDX21Q9NR30 783 aaKnown RBP eCLIP12.09□□□□□ -0.47
POLR1B-217ENST00000541869 METP08581 1390 aa12.09□□□□□ -0.47
POLR1B-217ENST00000541869 CARD10Q9BWT7 1032 aa12.09□□□□□ -0.47
POLR1B-217ENST00000541869 LDHBP07195 334 aaKnown RBP12.09□□□□□ -0.47
POLR1B-217ENST00000541869 ARHGAP45Q92619 1136 aa12.09□□□□□ -0.47
POLR1B-217ENST00000541869 RAB34Q9BZG1 259 aa12.09□□□□□ -0.47
POLR1B-217ENST00000541869 ECHDC1Q9NTX5 307 aa12.09□□□□□ -0.47
POLR1B-217ENST00000541869 PLEKHH1Q9ULM0 1364 aa12.09□□□□□ -0.47
POLR1B-217ENST00000541869 KIF5BP33176 963 aa12.08□□□□□ -0.47
POLR1B-217ENST00000541869 ARAP3Q8WWN8 1544 aa12.08□□□□□ -0.48
POLR1B-217ENST00000541869 ZNF213O14771 459 aa12.08□□□□□ -0.48
POLR1B-217ENST00000541869 IRX3P78415 501 aaPredicted RBP12.08□□□□□ -0.48
POLR1B-217ENST00000541869 CCDC184Q52MB2 194 aa12.08□□□□□ -0.48
POLR1B-217ENST00000541869 CKAP2LQ8IYA6 745 aa12.08□□□□□ -0.48
POLR1B-217ENST00000541869 CFAP65Q6ZU64 1925 aaKnown RBP12.08□□□□□ -0.48
POLR1B-217ENST00000541869 A2ML1A8K2U0 1454 aa12.08□□□□□ -0.48
POLR1B-217ENST00000541869 RIMBP3CA6NJZ7 1639 aa12.08□□□□□ -0.48
POLR1B-217ENST00000541869 RIMBP3BA6NNM3 1639 aa12.08□□□□□ -0.48
POLR1B-217ENST00000541869 RIMBP3Q9UFD9 1639 aa12.08□□□□□ -0.48
POLR1B-217ENST00000541869 TTC6Q86TZ1 520 aa12.08□□□□□ -0.48
POLR1B-217ENST00000541869 DCAF15Q66K64 600 aa12.07□□□□□ -0.48
POLR1B-217ENST00000541869 WDR70Q9NW82 654 aa12.07□□□□□ -0.48
POLR1B-217ENST00000541869 CARD14Q9BXL6 1004 aa12.07□□□□□ -0.48
POLR1B-217ENST00000541869 THRAP3Q9Y2W1 955 aaKnown RBP12.07□□□□□ -0.48
POLR1B-217ENST00000541869 SAMM50Q9Y512 469 aa12.07□□□□□ -0.48
POLR1B-217ENST00000541869 BAG4O95429 457 aaKnown RBP12.07□□□□□ -0.48
POLR1B-217ENST00000541869 STK38Q15208 465 aa12.07□□□□□ -0.48
POLR1B-217ENST00000541869 ZSCAN31Q96LW9 406 aaPredicted RBP12.07□□□□□ -0.48
POLR1B-217ENST00000541869 KAT14Q9H8E8 782 aa12.07□□□□□ -0.48
POLR1B-217ENST00000541869 STX8Q9UNK0 236 aa12.07□□□□□ -0.48
POLR1B-217ENST00000541869 PREX2Q70Z35 1606 aa12.07□□□□□ -0.48
POLR1B-217ENST00000541869 KIAA0232Q92628 1395 aa12.07□□□□□ -0.48
POLR1B-217ENST00000541869 PSDA5PKW4 1024 aaPredicted RBP12.07□□□□□ -0.48
POLR1B-217ENST00000541869 GOLIM4O00461 696 aa12.07□□□□□ -0.48
POLR1B-217ENST00000541869 STIM1Q13586 685 aa12.07□□□□□ -0.48
POLR1B-217ENST00000541869 SNRKQ9NRH2 765 aa12.07□□□□□ -0.48
POLR1B-217ENST00000541869 IQSEC3Q9UPP2 1182 aaPredicted RBP12.07□□□□□ -0.48
POLR1B-217ENST00000541869 HOXB7P09629 217 aa12.06□□□□□ -0.48
POLR1B-217ENST00000541869 CYP7A1P22680 504 aa12.06□□□□□ -0.48
POLR1B-217ENST00000541869 OLFM4Q6UX06 510 aa12.06□□□□□ -0.48
POLR1B-217ENST00000541869 CATIPQ7Z7H3 387 aa12.06□□□□□ -0.48
POLR1B-217ENST00000541869 PLBD2Q8NHP8 589 aa12.06□□□□□ -0.48
POLR1B-217ENST00000541869 TNPO1Q92973 898 aaKnown RBP12.06□□□□□ -0.48
POLR1B-217ENST00000541869 SDF4Q9BRK5 362 aa12.06□□□□□ -0.48
POLR1B-217ENST00000541869 BRINP3Q76B58 766 aa12.06□□□□□ -0.48
POLR1B-217ENST00000541869 EVI5LQ96CN4 794 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms