RNA–Protein interactions for RNA: ENST00000541864.6

SLC12A4-204, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-204ENST00000541864 LINS1Q8NG48 757 aa13.83□□□□□ -0.2
SLC12A4-204ENST00000541864 AK2P54819 239 aa13.82□□□□□ -0.2
SLC12A4-204ENST00000541864 CLEC17AQ6ZS10 378 aa13.82□□□□□ -0.2
SLC12A4-204ENST00000541864 RAB11FIP4Q86YS3 637 aa13.82□□□□□ -0.2
SLC12A4-204ENST00000541864 LARP1BQ659C4 914 aaKnown RBP13.82□□□□□ -0.2
SLC12A4-204ENST00000541864 ZNF790Q6PG37 636 aa13.82□□□□□ -0.2
SLC12A4-204ENST00000541864 DDX21Q9NR30 783 aaKnown RBP eCLIP13.82□□□□□ -0.2
SLC12A4-204ENST00000541864 XRN1Q8IZH2 1706 aaKnown RBP13.82□□□□□ -0.2
SLC12A4-204ENST00000541864 A0A087WZG4 1122 aa13.82□□□□□ -0.2
SLC12A4-204ENST00000541864 KIAA2012Q0VF49 1180 aa13.82□□□□□ -0.2
SLC12A4-204ENST00000541864 PTH1RQ03431 593 aa13.81□□□□□ -0.2
SLC12A4-204ENST00000541864 DDX46Q7L014 1031 aaKnown RBP13.81□□□□□ -0.2
SLC12A4-204ENST00000541864 PXDNQ92626 1479 aa13.81□□□□□ -0.2
SLC12A4-204ENST00000541864 RAD50Q92878 1312 aa13.81□□□□□ -0.2
SLC12A4-204ENST00000541864 ZNF830Q96NB3 372 aaPredicted RBP13.81□□□□□ -0.2
SLC12A4-204ENST00000541864 RBSNQ9H1K0 784 aa13.81□□□□□ -0.2
SLC12A4-204ENST00000541864 CNPY2Q9Y2B0 182 aa13.81□□□□□ -0.2
SLC12A4-204ENST00000541864 GUCY1B3Q02153 619 aa13.81□□□□□ -0.2
SLC12A4-204ENST00000541864 TMEM63CQ9P1W3 806 aa13.81□□□□□ -0.2
SLC12A4-204ENST00000541864 BRD1O95696 1058 aa13.81□□□□□ -0.2
SLC12A4-204ENST00000541864 CCDC173Q0VFZ6 552 aa13.81□□□□□ -0.2
SLC12A4-204ENST00000541864 LARP1Q6PKG0 1096 aaKnown RBP13.81□□□□□ -0.2
SLC12A4-204ENST00000541864 ZNF496Q96IT1 587 aaPredicted RBP13.81□□□□□ -0.2
SLC12A4-204ENST00000541864 LSG1Q9H089 658 aaKnown RBP13.81□□□□□ -0.2
SLC12A4-204ENST00000541864 C19orf44Q9H6X5 657 aa13.81□□□□□ -0.2
SLC12A4-204ENST00000541864 NPHP4O75161 1426 aaPredicted RBP13.8□□□□□ -0.2
SLC12A4-204ENST00000541864 WDR33Q9C0J8 1336 aaKnown RBP13.8□□□□□ -0.2
SLC12A4-204ENST00000541864 NPHP1O15259 732 aa13.8□□□□□ -0.2
SLC12A4-204ENST00000541864 CUL4AQ13619 759 aa13.8□□□□□ -0.2
SLC12A4-204ENST00000541864 CHMP4CQ96CF2 233 aa13.8□□□□□ -0.2
SLC12A4-204ENST00000541864 EAF2Q96CJ1 260 aaPredicted RBP13.8□□□□□ -0.2
SLC12A4-204ENST00000541864 FAM227BQ96M60 508 aa13.8□□□□□ -0.2
SLC12A4-204ENST00000541864 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.8□□□□□ -0.2
SLC12A4-204ENST00000541864 TTC41PQ6P2S7 1318 aa13.8□□□□□ -0.2
SLC12A4-204ENST00000541864 TLR7Q9NYK1 1049 aaKnown RBP13.79□□□□□ -0.2
SLC12A4-204ENST00000541864 LIMCH1Q9UPQ0 1083 aa13.79□□□□□ -0.2
SLC12A4-204ENST00000541864 USP16Q9Y5T5 823 aa13.79□□□□□ -0.2
SLC12A4-204ENST00000541864 GNL2Q13823 731 aaKnown RBP13.79□□□□□ -0.2
SLC12A4-204ENST00000541864 RNF20Q5VTR2 975 aa13.79□□□□□ -0.2
SLC12A4-204ENST00000541864 BLOC1S2Q6QNY1 142 aa13.79□□□□□ -0.2
SLC12A4-204ENST00000541864 INTS4Q96HW7 963 aaKnown RBP13.79□□□□□ -0.2
SLC12A4-204ENST00000541864 LTN1O94822 1766 aa13.79□□□□□ -0.2
SLC12A4-204ENST00000541864 ERBB3P21860 1342 aa13.79□□□□□ -0.2
SLC12A4-204ENST00000541864 MBD3O95983 291 aa13.79□□□□□ -0.2
SLC12A4-204ENST00000541864 TSPY26PQ9H489 355 aa13.79□□□□□ -0.2
SLC12A4-204ENST00000541864 FAM208AQ9UK61 1670 aaKnown RBP13.79□□□□□ -0.2
SLC12A4-204ENST00000541864 ANKRD13DQ6ZTN6 518 aa13.78□□□□□ -0.2
SLC12A4-204ENST00000541864 EVI5LQ96CN4 794 aa13.78□□□□□ -0.2
SLC12A4-204ENST00000541864 SLC52A2Q9HAB3 445 aa13.78□□□□□ -0.2
SLC12A4-204ENST00000541864 USP25Q9UHP3 1055 aa13.78□□□□□ -0.2
SLC12A4-204ENST00000541864 PXDNLA1KZ92 1463 aa13.78□□□□□ -0.2
SLC12A4-204ENST00000541864 ERBB4Q15303 1308 aa13.78□□□□□ -0.2
SLC12A4-204ENST00000541864 GADD45BO75293 160 aaPredicted RBP13.78□□□□□ -0.2
SLC12A4-204ENST00000541864 NMIQ13287 307 aaPredicted RBP13.78□□□□□ -0.2
SLC12A4-204ENST00000541864 ADCK5Q3MIX3 580 aa13.78□□□□□ -0.2
SLC12A4-204ENST00000541864 HSP90AB3PQ58FF7 597 aa13.78□□□□□ -0.2
SLC12A4-204ENST00000541864 IFNL2Q8IZJ0 200 aa13.78□□□□□ -0.2
SLC12A4-204ENST00000541864 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.78□□□□□ -0.2
SLC12A4-204ENST00000541864 SASH1O94885 1247 aa13.78□□□□□ -0.2
SLC12A4-204ENST00000541864 ZNF445P59923 1031 aa13.78□□□□□ -0.2
SLC12A4-204ENST00000541864 USP48Q86UV5 1035 aa13.78□□□□□ -0.2
SLC12A4-204ENST00000541864 ATP6V1DQ9Y5K8 247 aa13.78□□□□□ -0.2
SLC12A4-204ENST00000541864 PHF14O94880 888 aa13.77□□□□□ -0.2
SLC12A4-204ENST00000541864 GPTP24298 496 aa13.77□□□□□ -0.2
SLC12A4-204ENST00000541864 GJB2P29033 226 aa13.77□□□□□ -0.2
SLC12A4-204ENST00000541864 SF3A1Q15459 793 aaKnown RBP13.77□□□□□ -0.2
SLC12A4-204ENST00000541864 GIMAP6Q6P9H5 292 aa13.77□□□□□ -0.2
SLC12A4-204ENST00000541864 RUFY3Q7L099 469 aa13.77□□□□□ -0.2
SLC12A4-204ENST00000541864 CHST3Q7LGC8 479 aa13.77□□□□□ -0.2
SLC12A4-204ENST00000541864 CKAP2LQ8IYA6 745 aa13.77□□□□□ -0.2
SLC12A4-204ENST00000541864 NPHP3Q7Z494 1330 aa13.77□□□□□ -0.2
SLC12A4-204ENST00000541864 IGKV5-2P06315 115 aa13.77□□□□□ -0.21
SLC12A4-204ENST00000541864 CLCN1P35523 988 aa13.77□□□□□ -0.21
SLC12A4-204ENST00000541864 CCDC129Q6ZRS4 1044 aa13.77□□□□□ -0.21
SLC12A4-204ENST00000541864 RBM8AQ9Y5S9 174 aaKnown RBP13.77□□□□□ -0.21
SLC12A4-204ENST00000541864 HCLS1P14317 486 aaPredicted RBP13.77□□□□□ -0.21
SLC12A4-204ENST00000541864 CCT2P78371 535 aaKnown RBP13.77□□□□□ -0.21
SLC12A4-204ENST00000541864 PHKG2P15735 406 aa13.76□□□□□ -0.21
SLC12A4-204ENST00000541864 HAND2P61296 217 aa13.76□□□□□ -0.21
SLC12A4-204ENST00000541864 EPHA10Q5JZY3 1008 aa13.76□□□□□ -0.21
SLC12A4-204ENST00000541864 NFAT5O94916 1531 aa13.76□□□□□ -0.21
SLC12A4-204ENST00000541864 NEURL1BA8MQ27 555 aa13.76□□□□□ -0.21
SLC12A4-204ENST00000541864 GOLIM4O00461 696 aa13.76□□□□□ -0.21
SLC12A4-204ENST00000541864 STX6O43752 255 aa13.76□□□□□ -0.21
SLC12A4-204ENST00000541864 RRP9O43818 475 aaKnown RBP13.76□□□□□ -0.21
SLC12A4-204ENST00000541864 LARGE1O95461 756 aa13.76□□□□□ -0.21
SLC12A4-204ENST00000541864 DNM1Q05193 864 aaKnown RBP13.76□□□□□ -0.21
SLC12A4-204ENST00000541864 GCKRQ14397 625 aa13.76□□□□□ -0.21
SLC12A4-204ENST00000541864 FMNL2Q96PY5 1086 aa13.76□□□□□ -0.21
SLC12A4-204ENST00000541864 SNRPA1P09661 255 aaKnown RBP13.75□□□□□ -0.21
SLC12A4-204ENST00000541864 LRSAM1Q6UWE0 723 aa13.75□□□□□ -0.21
SLC12A4-204ENST00000541864 KAZALD1Q96I82 304 aa13.75□□□□□ -0.21
SLC12A4-204ENST00000541864 RGPD2P0DJD1 1756 aa13.75□□□□□ -0.21
SLC12A4-204ENST00000541864 SYT1P21579 422 aa13.75□□□□□ -0.21
SLC12A4-204ENST00000541864 MTX1Q13505 466 aa13.75□□□□□ -0.21
SLC12A4-204ENST00000541864 LMBR1LQ6UX01 489 aa13.75□□□□□ -0.21
SLC12A4-204ENST00000541864 PDIA6Q15084 440 aa13.75□□□□□ -0.21
SLC12A4-204ENST00000541864 LRRC37A3O60309 1634 aa13.74□□□□□ -0.21
SLC12A4-204ENST00000541864 TIMM10P62072 90 aa13.74□□□□□ -0.21
SLC12A4-204ENST00000541864 CREB3L3Q68CJ9 461 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms