RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 NOVA2Q9UNW9 492 aaKnown RBP9.56□□□□□ -0.88
CIT-211ENST00000541841 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.55□□□□□ -0.88
CIT-211ENST00000541841 SIN3BO75182 1162 aa9.55□□□□□ -0.88
CIT-211ENST00000541841 WEE1P30291 646 aa9.55□□□□□ -0.88
CIT-211ENST00000541841 TBC1D8BQ0IIM8 1120 aa9.55□□□□□ -0.88
CIT-211ENST00000541841 RTN1Q16799 776 aa9.55□□□□□ -0.88
CIT-211ENST00000541841 C8orf86Q6ZUL3 223 aa9.55□□□□□ -0.88
CIT-211ENST00000541841 TRIM11Q96F44 468 aa9.55□□□□□ -0.88
CIT-211ENST00000541841 PRIMPOLQ96LW4 560 aa9.55□□□□□ -0.88
CIT-211ENST00000541841 QTRT2Q9H974 415 aaKnown RBP9.55□□□□□ -0.88
CIT-211ENST00000541841 MSTNO14793 375 aa9.54□□□□□ -0.88
CIT-211ENST00000541841 SUZ12Q15022 739 aaKnown RBP9.54□□□□□ -0.88
CIT-211ENST00000541841 STK32AQ8WU08 396 aa9.54□□□□□ -0.88
CIT-211ENST00000541841 IGFLR1Q9H665 355 aa9.54□□□□□ -0.88
CIT-211ENST00000541841 ZMIZ1Q9ULJ6 1067 aa9.54□□□□□ -0.88
CIT-211ENST00000541841 PROCP04070 461 aa9.53□□□□□ -0.88
CIT-211ENST00000541841 GRNP28799 593 aaKnown RBP9.53□□□□□ -0.88
CIT-211ENST00000541841 KCNQ4P56696 695 aa9.53□□□□□ -0.88
CIT-211ENST00000541841 DGKZQ13574 1117 aa9.53□□□□□ -0.88
CIT-211ENST00000541841 STARD13Q9Y3M8 1113 aa9.53□□□□□ -0.88
CIT-211ENST00000541841 ARID3CA6NKF2 412 aa9.52□□□□□ -0.89
CIT-211ENST00000541841 PRMT3O60678 531 aa9.52□□□□□ -0.89
CIT-211ENST00000541841 IGHA1P01876 353 aa9.52□□□□□ -0.89
CIT-211ENST00000541841 ALAS2P22557 587 aa9.52□□□□□ -0.89
CIT-211ENST00000541841 ADH7P40394 386 aa9.52□□□□□ -0.89
CIT-211ENST00000541841 ZMYND15Q9H091 742 aa9.52□□□□□ -0.89
CIT-211ENST00000541841 DMGDHQ9UI17 866 aaKnown RBP9.52□□□□□ -0.89
CIT-211ENST00000541841 ADARB2-AS1A8MUL3 147 aa9.51□□□□□ -0.89
CIT-211ENST00000541841 TGFBR3LH3BV60 316 aa9.51□□□□□ -0.89
CIT-211ENST00000541841 M0R082 166 aa9.51□□□□□ -0.89
CIT-211ENST00000541841 ALBP02768 609 aa9.51□□□□□ -0.89
CIT-211ENST00000541841 FKBP5Q13451 457 aaPredicted RBP9.51□□□□□ -0.89
CIT-211ENST00000541841 ZNF417Q8TAU3 575 aa9.51□□□□□ -0.89
CIT-211ENST00000541841 TNFRSF25Q93038 417 aa9.51□□□□□ -0.89
CIT-211ENST00000541841 ZNF587Q96SQ5 575 aaPredicted RBP9.51□□□□□ -0.89
CIT-211ENST00000541841 PLVAPQ9BX97 442 aa9.51□□□□□ -0.89
CIT-211ENST00000541841 USP20Q9Y2K6 914 aa9.51□□□□□ -0.89
CIT-211ENST00000541841 VTI1AQ96AJ9 217 aa9.5□□□□□ -0.89
CIT-211ENST00000541841 LRFN2Q9ULH4 789 aa9.5□□□□□ -0.89
CIT-211ENST00000541841 FAM229AH3BQW9 127 aa9.49□□□□□ -0.89
CIT-211ENST00000541841 FOXO3O43524 673 aa9.49□□□□□ -0.89
CIT-211ENST00000541841 IDH3AP50213 366 aa9.49□□□□□ -0.89
CIT-211ENST00000541841 NEUROD1Q13562 356 aa9.49□□□□□ -0.89
CIT-211ENST00000541841 UBE2OQ9C0C9 1292 aaKnown RBP9.49□□□□□ -0.89
CIT-211ENST00000541841 NFKB1P19838 968 aa9.48□□□□□ -0.89
CIT-211ENST00000541841 CHRNA4P43681 627 aa9.48□□□□□ -0.89
CIT-211ENST00000541841 SRPK2P78362 688 aaKnown RBP9.48□□□□□ -0.89
CIT-211ENST00000541841 HIF1AQ16665 826 aa9.48□□□□□ -0.89
CIT-211ENST00000541841 IER5Q5VY09 327 aa9.48□□□□□ -0.89
CIT-211ENST00000541841 KRT25Q7Z3Z0 450 aa9.48□□□□□ -0.89
CIT-211ENST00000541841 GSX2Q9BZM3 304 aa9.48□□□□□ -0.89
CIT-211ENST00000541841 PODXL2Q9NZ53 605 aa9.48□□□□□ -0.89
CIT-211ENST00000541841 LOC100996750A0A140TA64 210 aa9.47□□□□□ -0.89
CIT-211ENST00000541841 C1QTNF9BB2RNN3 333 aa9.47□□□□□ -0.89
CIT-211ENST00000541841 FAM69CQ0P6D2 419 aa9.47□□□□□ -0.89
CIT-211ENST00000541841 COL9A3Q14050 684 aaPredicted RBP9.47□□□□□ -0.89
CIT-211ENST00000541841 CAPN12Q6ZSI9 719 aa9.47□□□□□ -0.89
CIT-211ENST00000541841 CD163Q86VB7 1156 aa9.47□□□□□ -0.89
CIT-211ENST00000541841 KRTAP4-6Q9BYQ5 205 aa9.47□□□□□ -0.89
CIT-211ENST00000541841 NOP53Q9NZM5 478 aaKnown RBP9.47□□□□□ -0.89
CIT-211ENST00000541841 PIK3R2O00459 728 aa9.46□□□□□ -0.9
CIT-211ENST00000541841 MICAL2O94851 1124 aa9.46□□□□□ -0.9
CIT-211ENST00000541841 INPP5BP32019 993 aa9.46□□□□□ -0.9
CIT-211ENST00000541841 MICALL1Q8N3F8 863 aa9.46□□□□□ -0.9
CIT-211ENST00000541841 PNMA5Q96PV4 448 aa9.46□□□□□ -0.9
CIT-211ENST00000541841 MKNK1Q9BUB5 465 aa9.46□□□□□ -0.9
CIT-211ENST00000541841 CCINQ13939 588 aa9.45□□□□□ -0.9
CIT-211ENST00000541841 OCLNQ16625 522 aa9.45□□□□□ -0.9
CIT-211ENST00000541841 COX20Q5RI15 118 aa9.45□□□□□ -0.9
CIT-211ENST00000541841 TMEM164Q5U3C3 297 aa9.45□□□□□ -0.9
CIT-211ENST00000541841 NUDT8Q8WV74 236 aa9.45□□□□□ -0.9
CIT-211ENST00000541841 SAP130Q9H0E3 1048 aa9.45□□□□□ -0.9
CIT-211ENST00000541841 SLC6A14Q9UN76 642 aa9.45□□□□□ -0.9
CIT-211ENST00000541841 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.45□□□□□ -0.9
CIT-211ENST00000541841 ACIN1Q9UKV3 1341 aaKnown RBP9.45□□□□□ -0.9
CIT-211ENST00000541841 C11orf91Q3C1V1 193 aa9.44□□□□□ -0.9
CIT-211ENST00000541841 C20orf204Q6ZNR8 217 aa9.44□□□□□ -0.9
CIT-211ENST00000541841 ALYREFQ86V81 257 aaKnown RBP9.44□□□□□ -0.9
CIT-211ENST00000541841 IFT43Q96FT9 208 aa9.44□□□□□ -0.9
CIT-211ENST00000541841 DNAJB12Q9NXW2 375 aaKnown RBP9.44□□□□□ -0.9
CIT-211ENST00000541841 ZFATQ9P243 1243 aa9.44□□□□□ -0.9
CIT-211ENST00000541841 NAGPAQ9UK23 515 aa9.44□□□□□ -0.9
CIT-211ENST00000541841 TARSP26639 723 aaKnown RBP9.43□□□□□ -0.9
CIT-211ENST00000541841 MYO19Q96H55 970 aa9.43□□□□□ -0.9
CIT-211ENST00000541841 OPLAHO14841 1288 aa9.42□□□□□ -0.9
CIT-211ENST00000541841 SASH3O75995 380 aa9.42□□□□□ -0.9
CIT-211ENST00000541841 NID1P14543 1247 aa9.42□□□□□ -0.9
CIT-211ENST00000541841 BAG6P46379 1132 aa9.42□□□□□ -0.9
CIT-211ENST00000541841 ARSDP51689 593 aa9.42□□□□□ -0.9
CIT-211ENST00000541841 ELOAQ14241 798 aaKnown RBP9.42□□□□□ -0.9
CIT-211ENST00000541841 NAA30Q147X3 362 aaPredicted RBP9.42□□□□□ -0.9
CIT-211ENST00000541841 SWI5Q1ZZU3 235 aa9.42□□□□□ -0.9
CIT-211ENST00000541841 FAM26DQ5JW98 314 aa9.42□□□□□ -0.9
CIT-211ENST00000541841 SLAIN2Q9P270 581 aa9.42□□□□□ -0.9
CIT-211ENST00000541841 FURINP09958 794 aa9.41□□□□□ -0.9
CIT-211ENST00000541841 MLLT1Q03111 559 aaPredicted RBP9.41□□□□□ -0.9
CIT-211ENST00000541841 TREML1Q86YW5 311 aa9.41□□□□□ -0.9
CIT-211ENST00000541841 RGL4Q8IZJ4 473 aa9.41□□□□□ -0.9
CIT-211ENST00000541841 CCDC97Q96F63 343 aaPredicted RBP9.41□□□□□ -0.9
CIT-211ENST00000541841 JPH1Q9HDC5 661 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms