RNA–Protein interactions for RNA: ENST00000541806.5

CLDN2-203, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 3,150 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-203ENST00000541806 LSG1Q9H089 658 aaKnown RBP10.4□□□□□ -0.74
CLDN2-203ENST00000541806 RBM27Q9P2N5 1060 aaKnown RBP10.4□□□□□ -0.74
CLDN2-203ENST00000541806 TRPM3Q9HCF6 1732 aaPredicted RBP10.4□□□□□ -0.74
CLDN2-203ENST00000541806 TTC41PQ6P2S7 1318 aa10.4□□□□□ -0.74
CLDN2-203ENST00000541806 JAKMIP1Q96N16 626 aaKnown RBP10.4□□□□□ -0.74
CLDN2-203ENST00000541806 DNAJC2Q99543 621 aaKnown RBP10.4□□□□□ -0.74
CLDN2-203ENST00000541806 GDPD2Q9HCC8 539 aa10.4□□□□□ -0.74
CLDN2-203ENST00000541806 RAD50Q92878 1312 aa10.4□□□□□ -0.74
CLDN2-203ENST00000541806 FSD2A1L4K1 749 aa10.4□□□□□ -0.75
CLDN2-203ENST00000541806 TFCP2Q12800 502 aa10.4□□□□□ -0.75
CLDN2-203ENST00000541806 RUFY2Q8WXA3 655 aa10.4□□□□□ -0.75
CLDN2-203ENST00000541806 TCEANC2Q96MN5 208 aa10.4□□□□□ -0.75
CLDN2-203ENST00000541806 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.4□□□□□ -0.75
CLDN2-203ENST00000541806 CHGBP05060 677 aa10.39□□□□□ -0.75
CLDN2-203ENST00000541806 ANAPC15P60006 121 aa10.39□□□□□ -0.75
CLDN2-203ENST00000541806 NMIQ13287 307 aaPredicted RBP10.39□□□□□ -0.75
CLDN2-203ENST00000541806 LMBR1LQ6UX01 489 aa10.39□□□□□ -0.75
CLDN2-203ENST00000541806 PDCL3Q9H2J4 239 aa10.39□□□□□ -0.75
CLDN2-203ENST00000541806 DNAJC5Q9H3Z4 198 aa10.39□□□□□ -0.75
CLDN2-203ENST00000541806 NBPF26B4DH59 902 aa10.39□□□□□ -0.75
CLDN2-203ENST00000541806 AK2P54819 239 aa10.39□□□□□ -0.75
CLDN2-203ENST00000541806 ADCK5Q3MIX3 580 aa10.39□□□□□ -0.75
CLDN2-203ENST00000541806 NBPF14Q5TI25 921 aa10.39□□□□□ -0.75
CLDN2-203ENST00000541806 NBPF10Q6P3W6 841 aaKnown RBP10.39□□□□□ -0.75
CLDN2-203ENST00000541806 NBPF15Q8N660 670 aa10.39□□□□□ -0.75
CLDN2-203ENST00000541806 EVI5LQ96CN4 794 aa10.39□□□□□ -0.75
CLDN2-203ENST00000541806 NEUROD6Q96NK8 337 aa10.39□□□□□ -0.75
CLDN2-203ENST00000541806 CACNA1FO60840 1977 aa10.39□□□□□ -0.75
CLDN2-203ENST00000541806 MCM2P49736 904 aa10.38□□□□□ -0.75
CLDN2-203ENST00000541806 MRE11P49959 708 aa10.38□□□□□ -0.75
CLDN2-203ENST00000541806 CYP2E1P05181 493 aaPredicted RBP10.38□□□□□ -0.75
CLDN2-203ENST00000541806 LMBRD1Q9NUN5 540 aa10.38□□□□□ -0.75
CLDN2-203ENST00000541806 OVOS2A0A0G2JMS6 1433 aa10.38□□□□□ -0.75
CLDN2-203ENST00000541806 IL2RBP14784 551 aa10.38□□□□□ -0.75
CLDN2-203ENST00000541806 SYTL4Q96C24 671 aaPredicted RBP10.38□□□□□ -0.75
CLDN2-203ENST00000541806 WDR17Q8IZU2 1322 aa10.38□□□□□ -0.75
CLDN2-203ENST00000541806 A0A0D9SFI3 127 aa10.37□□□□□ -0.75
CLDN2-203ENST00000541806 CDK11BP21127 795 aaKnown RBP10.37□□□□□ -0.75
CLDN2-203ENST00000541806 CNKSR2Q8WXI2 1034 aa10.37□□□□□ -0.75
CLDN2-203ENST00000541806 ZNF594Q96JF6 807 aaPredicted RBP10.37□□□□□ -0.75
CLDN2-203ENST00000541806 KIF1AQ12756 1690 aa10.37□□□□□ -0.75
CLDN2-203ENST00000541806 PTMSP20962 102 aa10.37□□□□□ -0.75
CLDN2-203ENST00000541806 PTPN12Q05209 780 aaKnown RBP10.37□□□□□ -0.75
CLDN2-203ENST00000541806 LRP10Q7Z4F1 713 aa10.37□□□□□ -0.75
CLDN2-203ENST00000541806 CCDC83Q8IWF9 413 aa10.37□□□□□ -0.75
CLDN2-203ENST00000541806 DBNDD2Q9BQY9 259 aa10.37□□□□□ -0.75
CLDN2-203ENST00000541806 NSFL1CQ9UNZ2 370 aaKnown RBP10.37□□□□□ -0.75
CLDN2-203ENST00000541806 RBM8AQ9Y5S9 174 aaKnown RBP10.37□□□□□ -0.75
CLDN2-203ENST00000541806 PCDH11XQ9BZA7 1347 aa10.37□□□□□ -0.75
CLDN2-203ENST00000541806 PCDH11YQ9BZA8 1340 aa10.37□□□□□ -0.75
CLDN2-203ENST00000541806 LARGE1O95461 756 aa10.36□□□□□ -0.75
CLDN2-203ENST00000541806 COL9A3Q14050 684 aaPredicted RBP10.36□□□□□ -0.75
CLDN2-203ENST00000541806 KLHL40Q2TBA0 621 aa10.36□□□□□ -0.75
CLDN2-203ENST00000541806 PLBD2Q8NHP8 589 aa10.36□□□□□ -0.75
CLDN2-203ENST00000541806 PDRG1Q9NUG6 133 aa10.36□□□□□ -0.75
CLDN2-203ENST00000541806 STRCP1A6NGW2 1772 aa10.36□□□□□ -0.75
CLDN2-203ENST00000541806 UTYO14607 1347 aa10.36□□□□□ -0.75
CLDN2-203ENST00000541806 PHRF1Q9P1Y6 1649 aaKnown RBP10.36□□□□□ -0.75
CLDN2-203ENST00000541806 SLFNL1Q499Z3 407 aa10.36□□□□□ -0.75
CLDN2-203ENST00000541806 CCDC129Q6ZRS4 1044 aa10.36□□□□□ -0.75
CLDN2-203ENST00000541806 DDX46Q7L014 1031 aaKnown RBP10.36□□□□□ -0.75
CLDN2-203ENST00000541806 RUFY3Q7L099 469 aa10.36□□□□□ -0.75
CLDN2-203ENST00000541806 NECAB1Q8N987 351 aa10.36□□□□□ -0.75
CLDN2-203ENST00000541806 DBNLQ9UJU6 430 aaKnown RBP10.36□□□□□ -0.75
CLDN2-203ENST00000541806 ZKSCAN1P17029 563 aaPredicted RBP10.36□□□□□ -0.75
CLDN2-203ENST00000541806 CUL4AQ13619 759 aa10.36□□□□□ -0.75
CLDN2-203ENST00000541806 TNNI3KQ59H18 835 aa10.36□□□□□ -0.75
CLDN2-203ENST00000541806 FPGT-TNNI3KV9GXZ4 949 aa10.36□□□□□ -0.75
CLDN2-203ENST00000541806 ALS2Q96Q42 1657 aa10.36□□□□□ -0.75
CLDN2-203ENST00000541806 TIMM10P62072 90 aa10.35□□□□□ -0.75
CLDN2-203ENST00000541806 ZNF589Q86UQ0 364 aaPredicted RBP10.35□□□□□ -0.75
CLDN2-203ENST00000541806 TEX2Q8IWB9 1127 aa10.35□□□□□ -0.75
CLDN2-203ENST00000541806 GPT2Q8TD30 523 aa10.35□□□□□ -0.75
CLDN2-203ENST00000541806 BCCIPQ9P287 314 aaKnown RBP eCLIP10.35□□□□□ -0.75
CLDN2-203ENST00000541806 USP42Q9H9J4 1324 aaKnown RBP10.35□□□□□ -0.75
CLDN2-203ENST00000541806 SEC62Q99442 399 aaKnown RBP10.35□□□□□ -0.75
CLDN2-203ENST00000541806 TMOD3Q9NYL9 352 aa10.35□□□□□ -0.75
CLDN2-203ENST00000541806 ASAP1Q9ULH1 1129 aa10.35□□□□□ -0.75
CLDN2-203ENST00000541806 LIMCH1Q9UPQ0 1083 aa10.35□□□□□ -0.75
CLDN2-203ENST00000541806 SMC3Q9UQE7 1217 aa10.35□□□□□ -0.75
CLDN2-203ENST00000541806 TAF6LQ9Y6J9 622 aa10.35□□□□□ -0.75
CLDN2-203ENST00000541806 CCDC171Q6TFL3 1326 aa10.35□□□□□ -0.75
CLDN2-203ENST00000541806 ZSCAN23Q3MJ62 389 aa10.34□□□□□ -0.75
CLDN2-203ENST00000541806 CREB3L3Q68CJ9 461 aa10.34□□□□□ -0.75
CLDN2-203ENST00000541806 CWC25Q9NXE8 425 aaPredicted RBP10.34□□□□□ -0.75
CLDN2-203ENST00000541806 BTG4Q9NY30 223 aa10.34□□□□□ -0.75
CLDN2-203ENST00000541806 CYP46A1Q9Y6A2 500 aa10.34□□□□□ -0.75
CLDN2-203ENST00000541806 DCCP43146 1447 aa10.34□□□□□ -0.75
CLDN2-203ENST00000541806 BRD1O95696 1058 aa10.34□□□□□ -0.75
CLDN2-203ENST00000541806 STK3Q13188 491 aa10.34□□□□□ -0.75
CLDN2-203ENST00000541806 CAMTA1Q9Y6Y1 1673 aa10.34□□□□□ -0.75
CLDN2-203ENST00000541806 RFX5P48382 616 aaPredicted RBP10.34□□□□□ -0.75
CLDN2-203ENST00000541806 CLEC17AQ6ZS10 378 aa10.34□□□□□ -0.75
CLDN2-203ENST00000541806 COPRSQ9NQ92 184 aa10.34□□□□□ -0.75
CLDN2-203ENST00000541806 RRAGDQ9NQL2 400 aaPredicted RBP10.34□□□□□ -0.75
CLDN2-203ENST00000541806 SYCE3A1L190 88 aa10.33□□□□□ -0.76
CLDN2-203ENST00000541806 HSP90B1P14625 803 aaKnown RBP10.33□□□□□ -0.76
CLDN2-203ENST00000541806 GPTP24298 496 aa10.33□□□□□ -0.76
CLDN2-203ENST00000541806 LRRC24Q50LG9 513 aa10.33□□□□□ -0.76
CLDN2-203ENST00000541806 DNAJC10Q8IXB1 793 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms