RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 XRN1Q8IZH2 1706 aaKnown RBP8.47□□□□□ -1.05
EPHA4-214ENST00000541600 TRIM6-TRIM34B2RNG4 842 aa8.47□□□□□ -1.05
EPHA4-214ENST00000541600 ZNF853P0CG23 659 aa8.47□□□□□ -1.05
EPHA4-214ENST00000541600 IL13P35225 146 aa8.47□□□□□ -1.05
EPHA4-214ENST00000541600 RIPK4P57078 832 aa8.47□□□□□ -1.05
EPHA4-214ENST00000541600 EXOSC9Q06265 439 aaKnown RBP8.47□□□□□ -1.05
EPHA4-214ENST00000541600 MTMR2Q13614 643 aa8.47□□□□□ -1.05
EPHA4-214ENST00000541600 NFE2L2Q16236 605 aa8.47□□□□□ -1.05
EPHA4-214ENST00000541600 ARSIQ5FYB1 569 aa8.47□□□□□ -1.05
EPHA4-214ENST00000541600 ATF7IPQ6VMQ6 1270 aa8.47□□□□□ -1.05
EPHA4-214ENST00000541600 PACS2Q86VP3 889 aa8.47□□□□□ -1.05
EPHA4-214ENST00000541600 SMC5Q8IY18 1101 aa8.47□□□□□ -1.05
EPHA4-214ENST00000541600 SPON1Q9HCB6 807 aa8.47□□□□□ -1.05
EPHA4-214ENST00000541600 GNEQ9Y223 722 aaKnown RBP8.47□□□□□ -1.05
EPHA4-214ENST00000541600 MAFBQ9Y5Q3 323 aaPredicted RBP8.47□□□□□ -1.05
EPHA4-214ENST00000541600 KIF24Q5T7B8 1368 aa8.47□□□□□ -1.05
EPHA4-214ENST00000541600 COL13A1Q5TAT6 717 aaPredicted RBP8.46□□□□□ -1.06
EPHA4-214ENST00000541600 SSH1Q8WYL5 1049 aa8.46□□□□□ -1.06
EPHA4-214ENST00000541600 ZBTB40Q9NUA8 1239 aa8.46□□□□□ -1.06
EPHA4-214ENST00000541600 IFT57Q9NWB7 429 aa8.46□□□□□ -1.06
EPHA4-214ENST00000541600 NALCNQ8IZF0 1738 aa8.46□□□□□ -1.06
EPHA4-214ENST00000541600 NRKQ7Z2Y5 1582 aa8.45□□□□□ -1.06
EPHA4-214ENST00000541600 U2SURPO15042 1029 aaKnown RBP8.45□□□□□ -1.06
EPHA4-214ENST00000541600 TRIM27P14373 513 aa8.45□□□□□ -1.06
EPHA4-214ENST00000541600 GNAI1P63096 354 aa8.45□□□□□ -1.06
EPHA4-214ENST00000541600 GUCA2AQ02747 115 aa8.45□□□□□ -1.06
EPHA4-214ENST00000541600 LMOD3Q0VAK6 560 aa8.45□□□□□ -1.06
EPHA4-214ENST00000541600 SAFB2Q14151 953 aaKnown RBP eCLIP8.45□□□□□ -1.06
EPHA4-214ENST00000541600 FAM98CQ17RN3 349 aaKnown RBP8.45□□□□□ -1.06
EPHA4-214ENST00000541600 PPP4R3BQ5MIZ7 849 aa8.45□□□□□ -1.06
EPHA4-214ENST00000541600 SKAP1Q86WV1 359 aa8.45□□□□□ -1.06
EPHA4-214ENST00000541600 EPS8L1Q8TE68 723 aa8.45□□□□□ -1.06
EPHA4-214ENST00000541600 FRAT1Q92837 279 aaPredicted RBP8.45□□□□□ -1.06
EPHA4-214ENST00000541600 NUDT16Q96DE0 195 aaKnown RBP8.45□□□□□ -1.06
EPHA4-214ENST00000541600 PDZRN3Q9UPQ7 1066 aa8.45□□□□□ -1.06
EPHA4-214ENST00000541600 TOPAZ1Q8N9V7 1692 aa8.44□□□□□ -1.06
EPHA4-214ENST00000541600 ITSN1Q15811 1721 aa8.44□□□□□ -1.06
EPHA4-214ENST00000541600 CFAP99D6REC4 459 aa8.44□□□□□ -1.06
EPHA4-214ENST00000541600 GIGYF1O75420 1035 aaPredicted RBP8.44□□□□□ -1.06
EPHA4-214ENST00000541600 TRIM37O94972 964 aa8.44□□□□□ -1.06
EPHA4-214ENST00000541600 NEFMP07197 916 aa8.44□□□□□ -1.06
EPHA4-214ENST00000541600 PTPREP23469 700 aa8.44□□□□□ -1.06
EPHA4-214ENST00000541600 RGS3P49796 1198 aa8.44□□□□□ -1.06
EPHA4-214ENST00000541600 SEMA3FQ13275 785 aa8.44□□□□□ -1.06
EPHA4-214ENST00000541600 WAPLQ7Z5K2 1190 aa8.44□□□□□ -1.06
EPHA4-214ENST00000541600 HLA-CQ95604 372 aa8.44□□□□□ -1.06
EPHA4-214ENST00000541600 SYT17Q9BSW7 474 aa8.44□□□□□ -1.06
EPHA4-214ENST00000541600 ZSWIM6Q9HCJ5 1215 aa8.44□□□□□ -1.06
EPHA4-214ENST00000541600 SMC4Q9NTJ3 1288 aa8.44□□□□□ -1.06
EPHA4-214ENST00000541600 PPP1R1BQ9UD71 204 aaPredicted RBP8.44□□□□□ -1.06
EPHA4-214ENST00000541600 NUP188Q5SRE5 1749 aa8.43□□□□□ -1.06
EPHA4-214ENST00000541600 FAM83GA6ND36 823 aa8.43□□□□□ -1.06
EPHA4-214ENST00000541600 VAMP4O75379 141 aa8.43□□□□□ -1.06
EPHA4-214ENST00000541600 BECN1Q14457 450 aa8.43□□□□□ -1.06
EPHA4-214ENST00000541600 DOK7Q18PE1 504 aa8.43□□□□□ -1.06
EPHA4-214ENST00000541600 GPR153Q6NV75 609 aa8.43□□□□□ -1.06
EPHA4-214ENST00000541600 TBC1D9Q6ZT07 1266 aa8.43□□□□□ -1.06
EPHA4-214ENST00000541600 TSC1Q92574 1164 aa8.43□□□□□ -1.06
EPHA4-214ENST00000541600 TBC1D32Q96NH3 1257 aa8.43□□□□□ -1.06
EPHA4-214ENST00000541600 USP31Q70CQ4 1352 aa8.43□□□□□ -1.06
EPHA4-214ENST00000541600 SSH2Q76I76 1423 aa8.43□□□□□ -1.06
EPHA4-214ENST00000541600 RGPD1P0DJD0 1748 aa8.43□□□□□ -1.06
EPHA4-214ENST00000541600 SHANK3Q9BYB0 1731 aa8.43□□□□□ -1.06
EPHA4-214ENST00000541600 SMAPO00193 183 aa8.42□□□□□ -1.06
EPHA4-214ENST00000541600 FOXO3O43524 673 aa8.42□□□□□ -1.06
EPHA4-214ENST00000541600 SLC10A3P09131 477 aa8.42□□□□□ -1.06
EPHA4-214ENST00000541600 HOXB3P14651 431 aaPredicted RBP8.42□□□□□ -1.06
EPHA4-214ENST00000541600 PRKAR2BP31323 418 aa8.42□□□□□ -1.06
EPHA4-214ENST00000541600 FTSJ3Q8IY81 847 aaKnown RBP8.42□□□□□ -1.06
EPHA4-214ENST00000541600 MRPL50Q8N5N7 158 aaKnown RBP8.42□□□□□ -1.06
EPHA4-214ENST00000541600 DNAJC5GQ8N7S2 189 aa8.42□□□□□ -1.06
EPHA4-214ENST00000541600 TSR2Q969E8 191 aaKnown RBP8.42□□□□□ -1.06
EPHA4-214ENST00000541600 NOB1Q9ULX3 412 aaKnown RBP8.42□□□□□ -1.06
EPHA4-214ENST00000541600 LHX6Q9UPM6 363 aa8.42□□□□□ -1.06
EPHA4-214ENST00000541600 TNNQ9UQP3 1299 aa8.42□□□□□ -1.06
EPHA4-214ENST00000541600 RREB1Q92766 1687 aa8.42□□□□□ -1.06
EPHA4-214ENST00000541600 DLG5Q8TDM6 1919 aa8.41□□□□□ -1.06
EPHA4-214ENST00000541600 OVOS2A0A0J9YW53 1432 aa8.41□□□□□ -1.06
EPHA4-214ENST00000541600 OVOS2Q6IE36 1432 aa8.41□□□□□ -1.06
EPHA4-214ENST00000541600 ATP9BO43861 1147 aa8.41□□□□□ -1.06
EPHA4-214ENST00000541600 EIF5BO60841 1220 aaKnown RBP8.41□□□□□ -1.06
EPHA4-214ENST00000541600 APBA3O96018 575 aa8.41□□□□□ -1.06
EPHA4-214ENST00000541600 SLF2Q8IX21 1173 aa8.41□□□□□ -1.06
EPHA4-214ENST00000541600 COG3Q96JB2 828 aa8.41□□□□□ -1.06
EPHA4-214ENST00000541600 FHDC1Q9C0D6 1143 aaPredicted RBP8.41□□□□□ -1.06
EPHA4-214ENST00000541600 UPF2Q9HAU5 1272 aaKnown RBP8.41□□□□□ -1.06
EPHA4-214ENST00000541600 KIAA0232Q92628 1395 aa8.4□□□□□ -1.06
EPHA4-214ENST00000541600 ROBO2Q9HCK4 1378 aa8.4□□□□□ -1.06
EPHA4-214ENST00000541600 ABCC4O15439 1325 aa8.4□□□□□ -1.06
EPHA4-214ENST00000541600 TTC21BQ7Z4L5 1316 aa8.4□□□□□ -1.06
EPHA4-214ENST00000541600 TTC21AQ8NDW8 1320 aa8.4□□□□□ -1.06
EPHA4-214ENST00000541600 PRR36Q9H6K5 1346 aa8.4□□□□□ -1.06
EPHA4-214ENST00000541600 RIMBP2O15034 1052 aa8.4□□□□□ -1.06
EPHA4-214ENST00000541600 ZBTB7BO15156 539 aaPredicted RBP8.4□□□□□ -1.06
EPHA4-214ENST00000541600 NUCB1Q02818 461 aa8.4□□□□□ -1.06
EPHA4-214ENST00000541600 ELOAQ14241 798 aaKnown RBP8.4□□□□□ -1.06
EPHA4-214ENST00000541600 NFKBIBQ15653 356 aa8.4□□□□□ -1.06
EPHA4-214ENST00000541600 TMEM57Q8N5G2 664 aa8.4□□□□□ -1.06
EPHA4-214ENST00000541600 PNMA1Q8ND90 353 aa8.4□□□□□ -1.06
EPHA4-214ENST00000541600 GCC1Q96CN9 775 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms